LOCUS       NM_178875               2500 bp    mRNA    linear   ROD 03-NOV-2020
DEFINITION  Mus musculus zinc finger protein 935 (Zfp935), transcript variant
            1, mRNA.
ACCESSION   NM_178875 XM_354783
VERSION     NM_178875.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2500)
  AUTHORS   Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng
            EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC,
            Babbitt PC and Ferrin TE.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC087936.1 and BC113193.1.
            
            On Nov 1, 2008 this sequence version replaced NM_178875.3.
            
            Transcript Variant: This variant (1) encodes the longer isoform (1)
            containing the 'KRAB' domain at the N-terminus and the Zn-finger
            domain at the C-terminus.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087936.1, BC113193.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164139 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-127               BC087936.1         1-127
            128-2315            BC113193.1         124-2311
            2316-2500           BC087936.1         2316-2500
FEATURES             Location/Qualifiers
     source          1..2500
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13"
     gene            1..2500
                     /gene="Zfp935"
                     /gene_synonym="8430426H19Rik; Es113; Gm49359"
                     /note="zinc finger protein 935"
                     /db_xref="GeneID:71508"
                     /db_xref="MGI:MGI:1918758"
     exon            1..106
                     /gene="Zfp935"
                     /gene_synonym="8430426H19Rik; Es113; Gm49359"
                     /inference="alignment:Splign:2.1.0"
     CDS             104..1165
                     /gene="Zfp935"
                     /gene_synonym="8430426H19Rik; Es113; Gm49359"
                     /note="isoform 1 is encoded by transcript variant 1; KRAB
                     zinc finger protein"
                     /codon_start=1
                     /product="KRAB zinc finger protein isoform 1"
                     /protein_id="NP_849206.2"
                     /db_xref="CCDS:CCDS36697.1"
                     /db_xref="GeneID:71508"
                     /db_xref="MGI:MGI:1918758"
                     /translation="MNAVTYEDVHVNFTQEEWALLDPSQKKLYKDVMVETYRNLNAIG
                     FNWEAHNIEEYCQSSRRHRRCERSQSAEKPSEYTQCGKAFALHAHSHAQRHERIHTEK
                     ITSEVIHCVEDFLPYTSLQVHKRTQTGQKPYECNQCGKGFRMPSCLKRHERIHTGEKP
                     YECNQCGKGFITPSHLKRHERIHTGEKPYKCNQCDKAFSQYVHLQIHRSTHTGEKPFK
                     CDECDKAFSKHFHLQNHKRTHTGEKPYKCNQCNKAFSQHTNLHIHRRTHTGEKPFKCN
                     ECDKVFSQFGHLQIHIKTHTGDKPYKCNQCNKAFYQKRSLQTHIRIHTGEKPYKCNQC
                     DKAFSQYGHLYIHRRIHTG"
     exon            107..233
                     /gene="Zfp935"
                     /gene_synonym="8430426H19Rik; Es113; Gm49359"
                     /inference="alignment:Splign:2.1.0"
     exon            234..294
                     /gene="Zfp935"
                     /gene_synonym="8430426H19Rik; Es113; Gm49359"
                     /inference="alignment:Splign:2.1.0"
     exon            295..2472
                     /gene="Zfp935"
                     /gene_synonym="8430426H19Rik; Es113; Gm49359"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1994..1999
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp935"
                     /gene_synonym="8430426H19Rik; Es113; Gm49359"
     polyA_site      2017
                     /gene="Zfp935"
                     /gene_synonym="8430426H19Rik; Es113; Gm49359"
     regulatory      2451..2456
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp935"
                     /gene_synonym="8430426H19Rik; Es113; Gm49359"
     regulatory      2455..2460
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp935"
                     /gene_synonym="8430426H19Rik; Es113; Gm49359"
     polyA_site      2472
                     /gene="Zfp935"
                     /gene_synonym="8430426H19Rik; Es113; Gm49359"
ORIGIN      
        1 gtgttccttt ccgtttcgag caggctgaaa gcttggtctg atttgtttta atctctgctg
       61 ccaggggcct tagggaattg ccagcgatct acgacgtggc gacatgaatg cagtgactta
      121 tgaggacgtg catgtgaact tcactcaaga ggagtgggct ctgctggatc cttcccagaa
      181 gaagctctac aaagatgtca tggtggagac ctacaggaac ctcaatgcta taggctttaa
      241 ttgggaagcc cataatatcg aagaatattg tcaaagttct agaagacaca gaaggtgtga
      301 aaggagtcag agtgcagaga aaccctctga atatactcaa tgtggtaaag cctttgcttt
      361 acatgctcac agtcatgccc aaaggcatga aaggattcat acagaaaaga tcacctctga
      421 agttattcac tgtgtcgagg actttttacc ttacacaagt ctccaagtac ataaaagaac
      481 acaaactgga cagaaaccct atgaatgtaa tcagtgtggt aaaggattta gaatgcctag
      541 ttgtcttaaa aggcatgaaa gaattcatac tggagagaaa ccgtatgaat gtaatcagtg
      601 tggtaaagga tttataacac ccagtcatct taaaaggcat gaaagaattc atactggaga
      661 gaaaccctac aaatgtaatc agtgtgataa agccttttcc caatacgttc atctccaaat
      721 tcatagaagc acacatactg gagagaaacc cttcaaatgt gatgaatgtg ataaagcctt
      781 ttcaaaacac tttcacctcc aaaatcataa aagaacacat actggagaga agccttacaa
      841 atgtaatcaa tgtaacaaag ccttttcaca acacactaat cttcacattc atagaagaac
      901 acatacagga gagaaaccct tcaaatgtaa tgaatgtgat aaagtctttt cccaatttgg
      961 tcatctccaa attcatataa aaacacatac tggagataaa ccctacaaat gtaatcaatg
     1021 taataaagcc ttctaccaga aacgtagtct ccaaacacat ataagaatac atactggaga
     1081 aaaaccctac aaatgtaatc aatgtgataa agccttttcc caatacggtc atctctatat
     1141 tcatagaaga atacatactg gatagaaacc cttcaaatgt attgaatgtg ataaaccatt
     1201 ttcaaaacaa ttttgcttcc aaaatcataa aagaacacat actggagaga agccatacaa
     1261 atgtaatcaa tgtgacagcc ttttcacaac acagttatct tcaaattcat agaagaagac
     1321 atacaggaga gaaacccttc aaatgtaatc aatgtgataa agccttttcc caacacagta
     1381 atctccacat tcatagaaga acacatacgg gagagaagcc ttacaaatgt actcaaagtg
     1441 acaaagcctt tcacaacaca gttatcttca aattcataga agaagacata caggagttaa
     1501 accctacaaa tggaatcagt gtgacaaagc cttttcccaa ccttgtaacc tccaatccgt
     1561 tgaagaattt atactggagt gaaatcttgc aaatgaaatg aatgtgacaa agcctttccc
     1621 catcattata atctacaaat tcataaagga catactagag agaaacctta caagtgtaat
     1681 cagtgtgtga aagtcttcaa aacatggtca tcttcaaaag aataaaagaa tacatactgg
     1741 agggaaaagc tacgaaggaa atggatgtga gcaacctttt tacaacacca tcatttctga
     1801 atgtataagt gaacatactg aagagaaaga ctatgaatgt gatcatagtc taaatcgtca
     1861 tgaacacatt tgtaggggcc agaatcctga gtataagcaa tgtggaaaaa tctatgctgt
     1921 gcaaagttat ctcctaatgc aggaaggagc acatacagga gagagagaga gagacacaga
     1981 gagagagaga atgaataaat atacacaatg tggtaaacct ttgcatatca cagttatctt
     2041 tgaatacata aaagagcaca taatatatct cagaatactt agaagaagac actggagaga
     2101 gaaactctgt atgagtaatg tggtaaggcc tctgcagttg acatttatct cataatgtat
     2161 aaattaacac agacatagca gggcgtggtg gtgcactcct ttaaacccag cactcgggat
     2221 gcagaggcag gcggatttct gagttcgagg ccagcctggt ctaaaaagtg agttcaaaaa
     2281 aaaagggggg ggggctggtg agatggctca gtgggtaaga gcacccgact gctcttccaa
     2341 aggtctggag atcaaatccc agcaaccaca tggtggctca caaccatctg taactagatc
     2401 tgacgccctc ttctggagtg tctgaaggca gctacagtgt acttacatat aataaataaa
     2461 taataataat taaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//
