LOCUS       NM_001033813            2960 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus zinc finger protein 872 (Zfp872), mRNA.
ACCESSION   NM_001033813 XM_890071 XM_913311
VERSION     NM_001033813.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2960)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2960)
  AUTHORS   Katayama S, Tomaru Y, Kasukawa T, Waki K, Nakanishi M, Nakamura M,
            Nishida H, Yap CC, Suzuki M, Kawai J, Suzuki H, Carninci P,
            Hayashizaki Y, Wells C, Frith M, Ravasi T, Pang KC, Hallinan J,
            Mattick J, Hume DA, Lipovich L, Batalov S, Engstrom PG, Mizuno Y,
            Faghihi MA, Sandelin A, Chalk AM, Mottagui-Tabar S, Liang Z,
            Lenhard B and Wahlestedt C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
REFERENCE   3  (bases 1 to 2960)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC159308.4.
            
            On Oct 19, 2007 this sequence version replaced NM_001033813.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK137156.1, BC150971.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-66                AC159308.4         69097-69162
            67-193              AC159308.4         77998-78124
            194-254             AC159308.4         78306-78366
            255-2960            AC159308.4         80349-83054
FEATURES             Location/Qualifiers
     source          1..2960
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 8.57 cM"
     gene            1..2960
                     /gene="Zfp872"
                     /gene_synonym="9530015I07Rik"
                     /note="zinc finger protein 872"
                     /db_xref="GeneID:619310"
                     /db_xref="MGI:MGI:3588272"
     exon            1..66
                     /gene="Zfp872"
                     /gene_synonym="9530015I07Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             64..1461
                     /gene="Zfp872"
                     /gene_synonym="9530015I07Rik"
                     /codon_start=1
                     /product="zinc finger protein 564"
                     /protein_id="NP_001028985.1"
                     /db_xref="CCDS:CCDS57663.1"
                     /db_xref="GeneID:619310"
                     /db_xref="MGI:MGI:3588272"
                     /translation="MDSVAFEDVAVNFTHEEWALLDDSQKELYQDVMQETVDNLASIG
                     ENWQDQSIRDQCKTQGKYISAHVEQRPREWKSACREVFTQLPALKQQHILPGVKPCEC
                     GICGKVYSCRSSLKRHMQCHSEHTQWESHGFRGKLYQCKDCGKAFSFQSSFRIHERTH
                     TGEKPYMCKECGKAFIYHTTYQGHMRMHTGEKPYKCKECGKAFSHPSLFRNHERAHSG
                     EKPYECKQCGKTFRYYQTFQLHERTHTGEKPYQCKQCGKALSRSTSFRSHERIHTGEK
                     PYKCRKCGKAFRFPSSFRKHERIHTDERPYDCKECGKAFISLPSFRRHVILHTGNGPY
                     KCKECGKAFDCPSSFHIHERTHTGEKPHECQRCGKAFSCASSVRIHERTHTGEKPYEC
                     KQCGKAFSSSSSFRMHERIHTGEKPYECRQCGKAFSFSSSFRMHERTHKGEKPYECKQ
                     CGKAFSSSSSFHMHG"
     exon            67..193
                     /gene="Zfp872"
                     /gene_synonym="9530015I07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            194..254
                     /gene="Zfp872"
                     /gene_synonym="9530015I07Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            255..2960
                     /gene="Zfp872"
                     /gene_synonym="9530015I07Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tatttcaggc aggttctctg gggtgtcagc cacggaggcg ggagcctggg aggacgcggg
       61 gaaatggact cagtggcttt tgaggatgta gctgtgaact tcacccatga ggagtgggct
      121 ctgctggacg attctcagaa ggaactgtac caagatgtga tgcaggaaac cgttgataac
      181 ctggcttcta ttggggaaaa ttggcaagac cagagcatta gggatcagtg caaaactcag
      241 ggaaaataca taagtgctca tgtagaacag agaccccgcg aatggaaaag tgcatgcagg
      301 gaagtcttca cccagcttcc agctcttaaa cagcagcata ttctccctgg agtaaagccc
      361 tgtgaatgcg gtatatgtgg aaaagtttac tcctgtcgtt cctctcttaa gaggcacatg
      421 cagtgtcata gtgagcacac acagtgggag agtcacggat tcagagggaa gttataccag
      481 tgtaaggact gtgggaaagc attcagcttt caaagttcat ttagaataca tgagaggact
      541 cacactggag agaagcccta catgtgtaag gaatgtggca aagccttcat ttatcacacc
      601 acttatcaag gacacatgag gatgcacaca ggagaaaaac cctataaatg taaggagtgt
      661 gggaaggctt tcagccaccc cagcttgttt cgaaaccacg aacgagctca ctctggagag
      721 aaaccctatg agtgtaagca gtgtgggaag accttcagat attaccaaac ctttcagtta
      781 catgagagga ctcacactgg agagaagcct taccagtgta agcagtgtgg gaaagctctc
      841 agtcgctcca catcttttcg aagtcacgag aggatccaca ctggagaaaa accatataaa
      901 tgtagaaaat gtggcaaagc ctttagattc cccagttcct ttcgcaaaca tgaaagaatt
      961 cacactgacg agaggcctta tgattgtaag gagtgtggga aagccttcat ttctctccca
     1021 agctttcgaa ggcatgtgat attgcacact ggaaacgggc cttacaaatg taaagagtgt
     1081 gggaaagcct tcgattgtcc cagctcattt cacattcatg agcgaacaca cactggagag
     1141 aagccccacg agtgtcagcg gtgcgggaag gccttcagct gcgccagttc tgttcgaatt
     1201 catgagagga ctcacacggg agagaagccc tatgagtgta agcagtgtgg gaaggccttt
     1261 agttcctcta gctcctttcg catgcatgaa cgaattcaca ctggagagaa accctatgaa
     1321 tgtaggcagt gtgggaaggc ctttagcttc tctagctcct ttcgcatgca tgagaggact
     1381 cacaagggag agaagcccta tgaatgtaag cagtgtggga aggcctttag ttcctctagc
     1441 tcctttcaca tgcatggatg aattcacact ggagagaaac cgtatgaatg taagcagtat
     1501 gggaaggctt tcagctgctc cagttctgtc cgaattcatg agaggactca ctcgggagag
     1561 aaaccctatg agtgtcagca gtgccacaag gccttcagtt gctctcattc tttccggatc
     1621 catgaaagga ctcacactgg agagaagccc tatgaatgtc agcagtgtgg gaaggccttc
     1681 agatgttctc gctccttcag aatacatgga agaactcata atgggcaatg atcctttaaa
     1741 tgtaagtcat gtggtaaagc cttccattgt cccactgccc tttgaagata ctctcttgct
     1801 tagagaaata ctgtgaacaa aatagaactg gaaaacctct catttctcta gttgtgaatc
     1861 ccagaaaaaa aaaaacccta tgtgtctatg tgatgggaaa accttcagtg gatatgcaac
     1921 ttcataaggc cacatagata cacaggggaa aataaacccc atacattagg tagtgtataa
     1981 aagtcctcag ttgctcagtt atctggaaac cacaaacttg tattacagga tagcttgatg
     2041 aatgcaagca ttgtgggaaa ccatcagtac tctgcgcctt ccaaacatgt gaagaggacc
     2101 cttaagaagt gaaaagtaat gattaatttc ctatcttatt gaatatttac atgatactta
     2161 tttgagaaat tgtgaattta tgaagataac cactggaaag gaattctgta agtgtggaca
     2221 atatgaggaa gttccatgta agtttgtata tgtatatttt tgaaaagtca taaaatgaaa
     2281 gaaagggagt tttcttttgt catatgctca ttcttttttt tttttaaaga tttatttatt
     2341 taactatgag tacactgtca ctgtcttcag acccaccaga agagggcatc caaatccatt
     2401 acagatggtt tagagccacc atgtggttgc tgggaattga actcaggacc tctggaagaa
     2461 gagtcggtgc tcttaaccac tgagccgtct ctccagcccc catatgctca ttcttaaaac
     2521 tgtgactctg gactatagat ttttgttact tttgcttata tgagcattga ggttagatta
     2581 ttctgaaagt catcattaaa taatggtaca taaatttaat aagtactggg ttggttggtt
     2641 ttttgggcag ttactatatt tttaaagatt tatttacttt gtgtatatga gtacactgta
     2701 gctgtcttca gacacccgaa aagttttttt ctagtgattt cttagaagca cttcattaac
     2761 tattcccaga taatctgtac taactcaagt attattttcc cttttcttta aggatatact
     2821 aaatttcctc attgcaatta cacattttca gattacaatt gtttcaggtt aagcaatatt
     2881 attgtgttta aacattgggt tttactactg tttacttgtg ttacttttca taaaactaat
     2941 taaattttat tacgtttact
//
