LOCUS       NM_001377115            3197 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus zinc finger protein 825 (Zfp825), transcript variant
            3, mRNA.
ACCESSION   NM_001377115 XM_017315504
VERSION     NM_001377115.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3197)
  AUTHORS   Ulmke PA, Sakib MS, Ditte P, Sokpor G, Kerimoglu C, Pham L, Xie Y,
            Mao X, Rosenbusch J, Teichmann U, Nguyen HP, Fischer A, Eichele G,
            Staiger JF and Tuoc T.
  TITLE     Molecular Profiling Reveals Involvement of ESCO2 in Intermediate
            Progenitor Cell Maintenance in the Developing Mouse Cortex
  JOURNAL   Stem Cell Reports 16 (4), 968-984 (2021)
   PUBMED   33798452
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT009718.13.
            
            On Dec 13, 2019 this sequence version replaced XM_017315504.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7345562.4706527.1,
                                           SRR5189673.247413.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164138, SAMN01164141
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-112               CT009718.13        81070-81181         c
            113-236             CT009718.13        71119-71242         c
            237-363             CT009718.13        70037-70163         c
            364-424             CT009718.13        69759-69819         c
            425-3197            CT009718.13        65598-68370         c
FEATURES             Location/Qualifiers
     source          1..3197
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 40.33 cM"
     gene            1..3197
                     /gene="Zfp825"
                     /note="zinc finger protein 825"
                     /db_xref="GeneID:235956"
                     /db_xref="MGI:MGI:2385315"
     exon            1..112
                     /gene="Zfp825"
                     /inference="alignment:Splign:2.1.0"
     exon            113..236
                     /gene="Zfp825"
                     /inference="alignment:Splign:2.1.0"
     CDS             180..1058
                     /gene="Zfp825"
                     /note="isoform 1 is encoded by transcript variant 3"
                     /codon_start=1
                     /product="zinc finger protein 124 isoform 1"
                     /protein_id="NP_001364044.1"
                     /db_xref="GeneID:235956"
                     /db_xref="MGI:MGI:2385315"
                     /translation="MASVHDINTTQGFRVIGLQDAVTYDDVRVNFTEEEWDLLDPSQK
                     SLYEEVMLETYQNITAIGYKWEDHHIEEYCQSSRRHERHERIHIGEKPYERNQCGKAF
                     ASDNHLQIHKRTNTEEKPYECNQCGKAFSQHSRLQYHKRSHTGEKPYKCNQCGKAYGH
                     HSSLQYHKRRHTGEKPYHCNQCDKAFSEHSSLEYHKITHLGEKPYECDQCGKAFAWQS
                     SLNIHKRTHSGEKPYECNECGKAFTHHASLQSHKRIHTGEKPYQCDQCGKAFAHQTSL
                     QCHKRTHTGEKPYECN"
     exon            237..363
                     /gene="Zfp825"
                     /inference="alignment:Splign:2.1.0"
     exon            364..424
                     /gene="Zfp825"
                     /inference="alignment:Splign:2.1.0"
     exon            425..3197
                     /gene="Zfp825"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 actggaagtt tgttttttgc tgtacaggct tgaatgtttc tccgtgtctt ctttgagcgc
       61 tgctattggg tgctgtgagg ggacgtcaag taagctccgt ttttgaaaca tgatcttcat
      121 ccacatcttg aagtttgaag tttggccaag aatatacaga gtagattctc tttctcagga
      181 tggcaagtgt tcatgacatc aatactaccc aaggcttcag agtcattgga ttgcaggatg
      241 cagtgactta tgatgatgtg cgtgtgaact tcactgagga agagtgggat ttgctggatc
      301 cttcccagaa aagtctctat gaagaggtga tgctggagac ctaccagaac atcactgcta
      361 taggctacaa gtgggaagac catcatattg aagaatattg tcaaagttct agaagacatg
      421 aaaggcatga aagaattcat attggagaga aaccctatga acgtaaccaa tgtggtaaag
      481 cctttgcaag tgacaatcat ctccaaatac ataaaagaac aaatactgaa gagaaacctt
      541 atgaatgtaa tcaatgtggt aaagcctttt cacaacacag tagactccaa tatcataaaa
      601 gaagtcatac tggagagaaa ccctataaat gtaatcagtg tggtaaagcc tatggacatc
      661 acagtagtct ccagtatcat aaaagaagac atactggaga gaaaccttat cactgtaatc
      721 aatgtgataa agcattttca gaacacagta gtcttgaata tcataaaata acacatcttg
      781 gagagaaacc ttatgagtgt gatcaatgtg gtaaagcctt tgcatggcag tctagtctca
      841 atatacataa aagaacacat tctggagaga aaccttatga gtgtaatgaa tgtggtaaag
      901 cctttacaca tcatgctagt ctccaaagtc ataaaagaat acatactgga gagaaaccgt
      961 atcagtgtga tcagtgtggt aaagcatttg cacatcaaac gagtctccaa tgccataaaa
     1021 gaacacatac tggagagaaa ccttatgaat gcaattaatg tggtaaagcc tttgcaagtc
     1081 acactcatct ccaagtacat gaaagaacac attttagaaa aaaaccttag aatgcaatca
     1141 atgttgtaaa gactttggat gtaagaataa tctccaaaga cataaaggaa catatactgg
     1201 acagaaacct tatgaatgta atcaaagtga taaagccttt gcaactcaca gtcatctaca
     1261 atgacataaa aacacagagg agagaaacct gggtattgtt tactctgaag ctccaccaag
     1321 tgcaaaacag accctcccat tccctccctg gaagacagtt tcttcctgac tgcctttgga
     1381 tcaaaatgca gaactctcag ctccttctcc agcatcatgt ctgcctgcat gctgctgctg
     1441 tgcttcctgc tatgatgaaa atggactaaa cctctgaaac tgtaagccag ccccaattaa
     1501 aggtttgctt ttatgagagt cgccttggtc atgatgtcta ttcctagcaa tggaaacact
     1561 aagacagaaa ccttgggagt gtatttaata tggtgaagcc tttgcacaat tctataggct
     1621 tcatcatcat gaaagaatat atactggagc cagacagtgg tggtgcatgc ctttaatccc
     1681 agcacttggg aggaagatgc aggcagactt ctgagttctc ggccagcctg gtctacaaaa
     1741 tgatttccag gacagcctgg gctatagaga gaaaccctgt cttgaaaaac caaaacaaac
     1801 caaaagagta tgtactggag agaaaccttt tgaatgtact tactatggtt aagcttcttc
     1861 ctacggttaa gaaggaatga ctttgacaga aatagttctc attctctgtc tttagaacgt
     1921 gagcatcaca caggagttca tgacaagctc attcttggac cctgtctaca tgtgttaaat
     1981 cagaagtttt gctctcagta tatgacctct agaaaaataa ttaaaggtgg cccctgaact
     2041 ctttatttct gactctccag ttactactaa tctatctttc aagcagaggc cccatgtcct
     2101 tgagctctct gggagcagag gtgatcaaaa aggtagtcaa gggctctgaa gcccctcagg
     2161 cacacgtgac gtttcaggca acaccagccc cactgaagca ctcacacaaa accgtgttga
     2221 ggattaatct aatgcctgct ctctgacaca gcgtttccaa cacagcaggt agaacttgcc
     2281 atatccaccc aacaaacccc atacacatct aggaaacttc tacagctcag aaactcctgt
     2341 tgcacctgaa attggatttc ccacaatcgt gccaggttca atggtgggag tggaaaagtg
     2401 aaaatattct gatcaatatt gctaaacgat gatccccatc actgccttta taagactttc
     2461 aaatacttca taacatttgt cacacaacag tgaatgtgtg tgagcctatc cctaaccact
     2521 aaccctaacc actaattcct taccctgtta tctgttgact ctcctctatg tatactgaat
     2581 agagtataga attaggctta gattaatgcc agtttgtcat taatgtttgt ctgaagacag
     2641 acttttttcc cacatgtatt tccttcaagt ctcatactct aagtgcctta aatgcctcac
     2701 ttattccttc agaacttgca agcatttttg tagggttttt ttttcatgtt ggaacgttcc
     2761 ttcataatct acatataacg cctactttgt taaaactgtt tcaatgttta caccactcta
     2821 acattttata tttgctaata ccataagata caataggttt aacaaatcca caatctactg
     2881 tgagaacatt tattcaaggg tggggaataa gcaatgttta tctcctcttt ctaagttctc
     2941 agtggcacca catctcaaaa ttaccatagt tcaaccaaaa tgccagtgaa attactgagt
     3001 tttcctcgta aaatattgac aaggcatttc ttaggagacc tggatatcct agaatcagtc
     3061 acaataaaaa tgctttactc atactgtatg gagacagttt cacattacat aaacagttat
     3121 acctcttcct tctttaaaaa tactggccag ccatgtcctt tttttttttt taataaagaa
     3181 ttagtatcat tttaaaa
//
