LOCUS       NM_177889               2120 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus zinc finger protein 82 (Zfp82), transcript variant 1,
            mRNA.
ACCESSION   NM_177889 XM_915034 XM_923526 XM_923530
VERSION     NM_177889.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2120)
  AUTHORS   Wang,S., Wong,C.C., Zhang,Y., Huang,J., Li,C., Zhai,J., Wang,G.,
            Wei,H., Zhang,X., He,H.H. and Yu,J.
  TITLE     ZNF545 loss promotes ribosome biogenesis and protein translation to
            initiate colorectal tumorigenesis in mice
  JOURNAL   Oncogene 40 (48), 6590-6600 (2021)
   PUBMED   34615997
  REMARK    GeneRIF: ZNF545 loss promotes ribosome biogenesis and protein
            translation to initiate colorectal tumorigenesis in mice.
REFERENCE   2  (bases 1 to 2120)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   3  (bases 1 to 2120)
  AUTHORS   Agata,Y., Matsuda,E. and Shimizu,A.
  TITLE     Rapid and efficient cloning of cDNAs encoding Kruppel-like zinc
            finger proteins by degenerate PCR
  JOURNAL   Gene 213 (1-2), 55-64 (1998)
   PUBMED   9630514
REFERENCE   4  (bases 1 to 2120)
  AUTHORS   Marine,J.C., Gilbert,D.J., Bellefroid,E.J., Martial,J.A.,
            Ihle,J.N., Copeland,N.G. and Jenkins,N.A.
  TITLE     Chromosomal location of fifteen unique mouse KRAB-containing zinc
            finger loci
  JOURNAL   Mamm Genome 7 (6), 413-416 (1996)
   PUBMED   8662221
REFERENCE   5  (bases 1 to 2120)
  AUTHORS   Bellefroid,E.J., Marine,J.C., Matera,A.G., Bourguignon,C.,
            Desai,T., Healy,K.C., Bray-Ward,P., Martial,J.A., Ihle,J.N. and
            Ward,D.C.
  TITLE     Emergence of the ZNF91 Kruppel-associated box-containing zinc
            finger gene family in the last common ancestor of anthropoidea
  JOURNAL   Proc Natl Acad Sci U S A 92 (23), 10757-10761 (1995)
   PUBMED   7479878
REFERENCE   6  (bases 1 to 2120)
  AUTHORS   Ihle,J.N., Smith-White,B., Sisson,B., Parker,D., Blair,D.G.,
            Schultz,A., Kozak,C., Lunsford,R.D., Askew,D., Weinstein,Y. et al.
  TITLE     Activation of the c-H-ras proto-oncogene by retrovirus insertion
            and chromosomal rearrangement in a Moloney leukemia virus-induced
            T-cell leukemia
  JOURNAL   J Virol 63 (7), 2959-2966 (1989)
   PUBMED   2542606
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY127198.1, BC060530.1 and BX525285.1.
            
            [WARNING] On Feb 4, 2025 this sequence was replaced by NM_177889.6.
            
            On Nov 16, 2011 this sequence version replaced NM_177889.4.
            
            Transcript Variant: This variant (1) represents the longest
            transcript and encodes the longest isoform (1).
            
            ##Evidence-Data-START##
            CDS exon combination :: BC058946.1, BC060530.1 [ECO:0000331]
            RNAseq introns       :: mixed sample support SAMN00849374,
                                    SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-328               BY127198.1         1-328
            329-1748            BC060530.1         256-1675
            1749-2120           BX525285.1         52-423
FEATURES             Location/Qualifiers
     source          1..2120
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 17.26 cM"
     gene            1..2120
                     /gene="Zfp82"
                     /gene_synonym="A030010D05; Krab16; Mszf3; Zfp-82"
                     /note="zinc finger protein 82"
                     /db_xref="GeneID:330502"
                     /db_xref="MGI:MGI:1890753"
     exon            1..43
                     /gene="Zfp82"
                     /gene_synonym="A030010D05; Krab16; Mszf3; Zfp-82"
                     /inference="alignment:Splign:2.1.0"
     exon            44..154
                     /gene="Zfp82"
                     /gene_synonym="A030010D05; Krab16; Mszf3; Zfp-82"
                     /inference="alignment:Splign:2.1.0"
     exon            155..318
                     /gene="Zfp82"
                     /gene_synonym="A030010D05; Krab16; Mszf3; Zfp-82"
                     /inference="alignment:Splign:2.1.0"
     exon            319..404
                     /gene="Zfp82"
                     /gene_synonym="A030010D05; Krab16; Mszf3; Zfp-82"
                     /inference="alignment:Splign:2.1.0"
     CDS             396..1988
                     /gene="Zfp82"
                     /gene_synonym="A030010D05; Krab16; Mszf3; Zfp-82"
                     /note="isoform 1 is encoded by transcript variant 1; zinc
                     finger protein 545"
                     /codon_start=1
                     /product="zinc finger protein 82 isoform 1"
                     /protein_id="NP_808557.2"
                     /db_xref="CCDS:CCDS39876.1"
                     /db_xref="GeneID:330502"
                     /db_xref="MGI:MGI:1890753"
                     /translation="MARVSVVFSDVSIAFSQEEWESLDLEQRNLYKDVMMENYHNVAS
                     LGCFISKPDVISLLEQGKEPWKVVRQRKPCPDSETKDETNQVFSENGIYEMNLSQWKI
                     MERIGNSGLKSLLLKNGWESRRKQERQEDPQEGYLSQVRHTSERVSSYEKRALTTRQR
                     IHFVEKPYECNECGKAFRVRQQLTFHHRIHTGEKPYECKECGMAFRQTAHLTRHQRLH
                     SGEKLYECKECGQAFIYGPELRAHQKLHTGEKPYTCRECGKAFRVRGQLTLHQRIHTG
                     EKPYVCQECGKAFRQLAHLTRHQKLNVVDRLYECKECGKDFLCGSGLRVHHKLHTGEK
                     PYECKDCGKAFRVRQQLTLHQRSHTGEKPYECTECGKTFSRGYHLILHHRIHTGEKPY
                     ECKECWKAFSRYSQLISHQSIHIGVKPYDCKDCGKAFRLLSQLTQHQSVHAGEKPYSC
                     KECGKSFRLRQKLALHQSIHTGEKPFECKECRKAFRLNSSLIQHLRIHSGEKPYECKE
                     CKKAFRQHSHLTHHLKVHTVKV"
     exon            405..531
                     /gene="Zfp82"
                     /gene_synonym="A030010D05; Krab16; Mszf3; Zfp-82"
                     /inference="alignment:Splign:2.1.0"
     exon            532..621
                     /gene="Zfp82"
                     /gene_synonym="A030010D05; Krab16; Mszf3; Zfp-82"
                     /inference="alignment:Splign:2.1.0"
     exon            622..2107
                     /gene="Zfp82"
                     /gene_synonym="A030010D05; Krab16; Mszf3; Zfp-82"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2085..2090
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp82"
                     /gene_synonym="A030010D05; Krab16; Mszf3; Zfp-82"
                     /note="hexamer: ATTAAA"
     polyA_site      2107
                     /gene="Zfp82"
                     /gene_synonym="A030010D05; Krab16; Mszf3; Zfp-82"
                     /note="major polyA site"
ORIGIN      
        1 aactgagccg agcctgggtc ccagttccgt gaacttagtg aaggctggac aaggctccga
       61 gaaaagtttg gacgttaaca ttcgctccta ctccagcctg cctttaagtg ctcacaggaa
      121 ggggagggat aaatcgctgt tgcctgttta aaaggaatga tggccaggta aatggctcag
      181 tgggtggagg agcttgctgt ccagcctgag agcttgagtt tgatccagcg actcctgcga
      241 gttttcctcc tatttccaca tgtgtgctgt ggcatctgtg tagccacaca ccacattcat
      301 atacacgcaa taatacagcc ctggcctccg tggactctgc ttcttccgag aaataaactc
      361 caaggaagac tgagcagctg ttgggtttct aaaccatggc ccgtgtgtca gtggtgttca
      421 gtgatgtgtc catagccttc tcgcaggagg agtgggagtc cctggactta gaacagagga
      481 atttgtacaa ggatgtgatg atggagaact accacaatgt ggcctcgcta ggatgcttca
      541 tttctaagcc agatgtgatt tccttactgg agcaagggaa agagccctgg aaggttgtga
      601 ggcaaagaaa accatgtcca gattcggaaa ctaaggatga gaccaaccag gtgttctcag
      661 aaaatggtat ttatgaaatg aatttatccc agtggaagat aatggaaaga attgggaaca
      721 gtggcctaaa gagcctcctt ttaaaaaatg gatgggagtc gagaagaaaa caggaaagac
      781 aagaggaccc tcaggagggg tatctcagtc aagtgaggca cacatctgaa agagtgtcct
      841 cttatgagaa gcgcgcatta actacacgtc agaggatcca ctttgtggag aaaccctatg
      901 agtgcaatga atgtgggaag gcctttagag tccgccagca gctcactttt catcacagaa
      961 ttcacacagg cgagaagccc tatgaatgta aggagtgtgg gatggccttc aggcagacgg
     1021 cccaccttac caggcaccag agactgcatt ctggtgaaaa actgtatgaa tgcaaggagt
     1081 gtgggcaagc tttcatatac ggccccgagc tcagagcaca tcagaagctt cacaccggcg
     1141 agaagcccta cacgtgtaga gaatgtggga aagccttcag ggtacgggga caactcactc
     1201 tccatcagag gatccatact ggggagaagc cctatgtgtg tcaggagtgt gggaaggcct
     1261 tcaggcagtt ggcgcacctc actcgccatc agaagcttaa tgtcgtcgac agactgtacg
     1321 agtgtaaaga gtgtgggaaa gactttttgt gtggctctgg ccttagagta catcacaaac
     1381 ttcacactgg tgagaaaccc tatgagtgca aggactgtgg gaaggcgttt agagttcgac
     1441 agcagctaac gctccatcag aggagtcata ctggggagaa gccctatgag tgcactgagt
     1501 gtgggaagac ctttagtcgg ggctaccatc ttattctcca tcacagaatc catactggag
     1561 aaaagcctta cgaatgcaag gagtgctgga aggcgttcag tcgctactca cagcttattt
     1621 cgcatcagag catccatatt ggggttaaac cctatgactg caaggactgt gggaaagcct
     1681 tcagactcct ctctcagctc acacagcatc agagtgttca tgccggggag aagccttact
     1741 cttgtaagga atgcgggaag tctttcagat tgcgtcagaa acttgctctc caccagagta
     1801 ttcatactgg cgaaaagccc tttgagtgca aagaatgtag gaaggccttt cgacttaatt
     1861 cttctcttat ccaacatctg agaatccatt ctggtgagaa accctatgag tgtaaagagt
     1921 gtaagaaggc ctttagacaa cattctcacc tcacccatca tctgaaggtt catactgtca
     1981 aagtgtgaca aagtcttagc cgtctcctag aacattctgt gaatgttatg gctaatcttg
     2041 cttatccata catgtaactg acctggcata agtggtttta tatcattaaa ggaatatact
     2101 aatataaaaa aaaaaaaaaa
//
