LOCUS       NM_183177               3549 bp    mRNA    linear   ROD 31-OCT-2023
DEFINITION  Mus musculus zinc finger protein 811 (Zfp811), transcript variant
            1, mRNA.
ACCESSION   NM_183177
VERSION     NM_183177.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3549)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3549)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   3  (bases 1 to 3549)
  AUTHORS   Zambrowicz BP, Abuin A, Ramirez-Solis R, Richter LJ, Piggott J,
            BeltrandelRio H, Buxton EC, Edwards J, Finch RA, Friddle CJ, Gupta
            A, Hansen G, Hu Y, Huang W, Jaing C, Key BW Jr, Kipp P, Kohlhauff
            B, Ma ZQ, Markesich D, Payne R, Potter DG, Qian N, Shaw J, Schrick
            J, Shi ZZ, Sparks MJ, Van Sligtenhorst I, Vogel P, Walke W, Xu N,
            Zhu Q, Person C and Sands AT.
  TITLE     Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap
            screen to identify potential targets for therapeutic intervention
  JOURNAL   Proc Natl Acad Sci U S A 100 (24), 14109-14114 (2003)
   PUBMED   14610273
REFERENCE   4  (bases 1 to 3549)
  AUTHORS   Carninci P and Hayashizaki Y.
  TITLE     High-efficiency full-length cDNA cloning
  JOURNAL   Methods Enzymol 303, 19-44 (1999)
   PUBMED   10349636
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT485613.9, BC052046.1, AK132056.1 and AI413693.1.
            
            On Jun 5, 2012 this sequence version replaced NM_183177.2.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (1).
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments. A downstream
            translational start codon is selected for this RefSeq based on its
            better conservation in mammalian species and strong Kozak signal.
            An upstream in-frame start codon is also present but has a weaker
            Kozak signal and is only present in mouse; use of the upstream
            start codon would result in a protein that is 4 aa longer. Leaky
            scanning by ribosomes may allow translation initiation at the
            downstream start codon.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC052046.1, BB652974.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164133, SAMN01164137
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on expression, longest
                                                protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-78                CT485613.9         110624-110701       c
            79-1605             BC052046.1         1-1527
            1606-2326           CT485613.9         97656-98376         c
            2327-3524           AK132056.1         1-1198
            3525-3549           AI413693.1         1-25                c
FEATURES             Location/Qualifiers
     source          1..3549
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 17.98 cM"
     gene            1..3549
                     /gene="Zfp811"
                     /note="zinc finger protein 811"
                     /db_xref="GeneID:240063"
                     /db_xref="MGI:MGI:2682944"
     exon            1..150
                     /gene="Zfp811"
                     /inference="alignment:Splign:2.1.0"
     CDS             148..1806
                     /gene="Zfp811"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="zinc finger protein 811 isoform 1"
                     /protein_id="NP_899000.2"
                     /db_xref="CCDS:CCDS79528.1"
                     /db_xref="GeneID:240063"
                     /db_xref="MGI:MGI:2682944"
                     /translation="MELVTFEDVAVHFTMEEWALLDLSQKELYKDVMKEILRNVVSIG
                     DIRKHQKIDNKYQNSGRKLRCQLVEKLHDCKEGHECAEIFKFSTEGTVNHEFYPGVHI
                     CKRNGFVNVLIGHLAINVRLKPRPGQKSNEVQEHGKNVYTKESQGTSSASPSLQKHQS
                     AEPAEKSDKTKQPDEDLRLGQNHERTPAEEKHHKCKHCGKACTSLSSLKRHEQHYHAK
                     KCSKCKQCGKAFPFPSSLQVHQRIHTGEKPYACKTCGKTFGHSSSLLRHERIHTGSSP
                     HECKLCKKTFTRLNSLLRHKIIHTGEKPYACNQCGKAFSRSASLQRHTRLHTGEKPYV
                     CKQCGKAFITSTYLQVHERTHTGEKPYVCKECGSTFMLWTQFQKHKIVHSGVNPFVCK
                     QCGKAFTRLGTLQIHERIHTGEKPYVCKQCAKAFMSLTQLRRHEIIHSGIKPYMCKQC
                     GKGFLCSTTLRSHEKIHSGSNPYVCSQCEKVVSSESALRKHKMIHTGEKPCVCKQCGK
                     TFTHLSSLQYHALMHSGEKPHECKKCGKGFRSLSHLKKHERTQH"
     exon            151..277
                     /gene="Zfp811"
                     /inference="alignment:Splign:2.1.0"
     exon            278..338
                     /gene="Zfp811"
                     /inference="alignment:Splign:2.1.0"
     exon            339..3536
                     /gene="Zfp811"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttttggtccc cgccttattt ggggatctgg attgttagca tctgtacagg gaatctccag
       61 gtctctctct ctctctactc catttctgcc tcacctccac tgactgcagg aactacaaga
      121 ggacactagg acatcatgtc tctggaaatg gagctggtga ccttcgagga tgtggctgtg
      181 cacttcacca tggaggagtg ggctctgctg gatctatccc aaaaggagct ctacaaagac
      241 gtgatgaagg agatattgag aaatgtggtt tccataggag acataaggaa acaccaaaag
      301 attgacaata aataccaaaa ttctgggaga aaactaagat gtcaacttgt ggagaaactc
      361 catgactgta aagaaggtca tgagtgtgca gagatcttca aattctctac agagggcact
      421 gtgaaccatg aattttatcc aggagtacat atatgtaaaa gaaatgggtt tgtcaatgta
      481 ctcattggcc atttagctat aaatgtgcga ctgaaaccta ggccagggca gaagtcaaat
      541 gaagtccagg aacatggaaa gaatgtgtat actaaggaat ctcagggcac ctccagcgct
      601 tccccgtctc ttcagaagca tcaaagtgct gagcctgcag agaaatctga taaaactaaa
      661 cagcctgatg aagacttgag acttggtcag aatcatgaaa ggactcctgc tgaagaaaaa
      721 caccacaaat gtaaacactg tgggaaagct tgtacttctc tcagctcctt gaagaggcat
      781 gaacaacatt accatgcaaa gaaatgctct aagtgtaagc agtgtgggaa agccttccct
      841 ttcccgagtt ccctacaagt ccaccaaagg atccacactg gagaaaagcc ctatgcgtgt
      901 aagacgtgtg ggaagacctt tggacattcc agttctctcc taagacatga aagaatccac
      961 actggctcga gtccccatga gtgtaaactg tgcaagaaaa cctttactcg tttgaattcg
     1021 cttttaaggc acaaaataat tcatactggt gagaagccct atgcatgtaa tcagtgtggg
     1081 aaagctttct ctcgatccgc ttcccttcag agacacacaa gactccacac tggagagaaa
     1141 ccctatgtgt gtaagcagtg tgggaaagcc ttcattacct ctacttacct acaagttcat
     1201 gaacgaactc acactgggga aaaaccatat gtatgtaagg agtgtgggag caccttcatg
     1261 ctttggactc aattccaaaa gcataaaata gttcacagcg gtgtgaatcc ctttgtttgt
     1321 aagcaatgcg ggaaggcttt cactcgtctt ggtaccctac agatacatga gagaattcac
     1381 actggtgaga agccctatgt gtgtaagcag tgtgcaaaag ccttcatgtc tttgactcag
     1441 ttaagacgac atgaaataat ccacagtggc atcaaaccct acatgtgcaa acaatgtgga
     1501 aaggggtttc tctgctctac tactcttcgg agtcatgaga agatccacag tggcagtaac
     1561 ccgtatgtat gttctcaatg tgagaaagtt gtgagttctg agagcgcttt gcggaaacat
     1621 aaaatgattc acactggaga gaagccttgt gtctgtaagc aatgtggcaa aacattcact
     1681 catttaagtt ctcttcagta ccatgcactg atgcacagcg gagagaaacc ccatgaatgt
     1741 aagaaatgcg ggaaaggctt tcggtctctt agtcacctta aaaagcacga gagaactcaa
     1801 cactaaatag aaactatatg catggaagca atatgggaaa gccatacaca gtggcataaa
     1861 tccataggct tgtttgtaag cagtgttcac agcctttaaa tagctgtggt gttttcacat
     1921 aaactcactg gagaaaaggg ggactttttg ctaacaatat gtgaaagttc cctataggat
     1981 tgattttaaa aaacaaaaac ccatgaaata gccagagtgg agggggaacc tttttaaaaa
     2041 ataatatgga agccaggcag tggtggtgca tgcctttagt cccagtactt gggaggcaga
     2101 ggcaggtgaa tccctgtgag ttcaagacca gcctggtcta cagggggagt tttaagacag
     2161 ctgaggctgt cctgtctcaa aacagagaaa ccgtgtctca aaaaaaaaaa aaaaaaaaaa
     2221 aaagcctaat tgatgaagga agaggaagag gaggaggggg gaaggaagag gacggggagg
     2281 aagagaaaga agaagaggaa ggaggaggag gaggaggagg aggaggagaa ggaggaggag
     2341 gaggagaaga agaagaagaa gaagaagaag aagaagaaga agaagaagaa gaagtagtag
     2401 tttttatatt aaaagttttc tttaattaca tgagtaaact cacactggtg aaaagctgta
     2461 tgagtacaag tgatgcttaa actttttgtg gtcccaaatc atgggaaagg catggcattg
     2521 attagattgt agaggaacct ggtgcatgtt tgcaatgtag aaagtcttca cttctctgct
     2581 tcctccaaat atgtataaga agtcaactag agggtgctgg agagatgcct cagtggttaa
     2641 gagcactgac tgttcttaga gaggatccag gtttgattcc caacacccac atggaaagcc
     2701 acaactgtcc caactccagt tctaagagac ccagtgtcct cttctgagct cagtggggcc
     2761 ttcatgtgca tggcacacag acatatatgc aggcaaatta accacacaca caataaaaaa
     2821 taagtcatag cagagagaac ccctttgtgt gtaggtaata ttgaaaagcc tctcattagc
     2881 acagttaatt tcacagacat gaaagaacct accctagagt aaccttaaat atggggtcta
     2941 cttaaaaaat ctttctagac tatttatttc atgtgtgtaa gtgttttgcc tgcatgtgtg
     3001 aatgtgtgtc acatatgtgc actgcctgcc ccaccctgaa gagtgcctgg agttacagat
     3061 ggctgtgagc agccttgtag gtgctgggat ctgaacaaac gccctttgta aacacaggga
     3121 gtgctcttaa aaactgagcc atctctccag cccagtagtt cattctggac tcctatttct
     3181 aaattttgtt ttacaaaata agcttaagcc aactatgtga gataggatga cagcttatac
     3241 ccttgggatg gagactagta atcagcacat gtgaaggaaa caagacaaaa caaaaaacag
     3301 cggtaaaaag aaaagtaaac tattgtgaaa tgattctgta aggtttctta aagcagaaat
     3361 ctagagttta atgggtgatc tcttctcgaa tcaaatctgg cacgtttctg tttgcattgt
     3421 gaattgtgtt agattcattg ttgaactgac atttaattgt aacatgccaa tattcataaa
     3481 tgcctttttt caagcaattg tggttaatta aaaattactt tttgagaata ttggaaaaaa
     3541 aaaaaaaaa
//
