LOCUS       NM_001411810            7695 bp    mRNA    linear   ROD 13-JUN-2024
DEFINITION  Mus musculus zinc finger protein 800 (Zfp800), transcript variant
            12, mRNA.
ACCESSION   NM_001411810 XM_006505143
VERSION     NM_001411810.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 7695)
  AUTHORS   Osipovich,A.B., Dudek,K.D., Greenfest-Allen,E., Cartailler,J.P.,
            Manduchi,E., Potter Case,L., Choi,E., Chapman,A.G., Clayton,H.W.,
            Gu,G., Stoeckert,C.J. Jr. and Magnuson,M.A.
  TITLE     A developmental lineage-based gene co-expression network for mouse
            pancreatic beta-cells reveals a role for Zfp800 in pancreas
            development
  JOURNAL   Development 148 (6) (2021)
   PUBMED   33653874
  REMARK    GeneRIF: A developmental lineage-based gene co-expression network
            for mouse pancreatic beta-cells reveals a role for Zfp800 in
            pancreas development.
            Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC068501.4.
            
            On Sep 2, 2022 this sequence version replaced XM_006505143.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR14777535.2405869.1,
                                           SRR7652917.654802.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-547               AC068501.4         81533-82079         c
            548-666             AC068501.4         80873-80991         c
            667-762             AC068501.4         76586-76681         c
            763-906             AC068501.4         67296-67439         c
            907-2593            AC068501.4         63132-64818         c
            2594-7695           AC068501.4         30699-35800         c
FEATURES             Location/Qualifiers
     source          1..7695
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 11.99 cM"
     gene            1..7695
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
                     /note="zinc finger protein 800"
                     /db_xref="GeneID:627049"
                     /db_xref="MGI:MGI:1889334"
     exon            1..547
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
                     /inference="alignment:Splign:2.1.0"
     exon            548..666
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
                     /inference="alignment:Splign:2.1.0"
     CDS             606..2753
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
                     /note="isoform d is encoded by transcript variant 12"
                     /codon_start=1
                     /product="zinc finger protein 800 isoform d"
                     /protein_id="NP_001398739.1"
                     /db_xref="GeneID:627049"
                     /db_xref="MGI:MGI:1889334"
                     /translation="MPLRDKYCQTDHHHHGCCEPVYILEPGDPPLLQQPVQTSKSGIQ
                     QIIECFRSGTKQLKHILLKDVDTIFECKLCRSLFRGLPNLITHKKFYCPPSLQMDDNL
                     PDVNDKQSQAISDLLEAIYPRVDKREYIIKLEPIETNQNAVFQYISRTDNPAEVTESS
                     STPEQTEVQIQETSSEQLKAVPDADTEVEEAIEPPSIETVVDEAAAPTEEQPQESQAD
                     LETSDSSDLGHQLICCLCRKEFNSRRGVRRHIRKVHKKKMEELKKYIETRKTPNQSSK
                     GRSKSVLVSLSRSCPVCCKSFATKANVRRHFDEVHRGLRRDSITPDIATKPGQPLFLD
                     SASPKKSFKTRKQKSSKAEYNLTACKCLLCKRKYSSQIMLKRHMQIVHKITLSGANSK
                     REKGPNNTANSSEVKVELADSVESSPPSITHSPQNELKGTNHSNEKKNTPATQKNKVK
                     QDSESPKSASPSAAGGQQKTRKPKLSAGFDFKQLYCKLCKRQFTSKQNLTKHIELHTD
                     GNNIYVKFYKCPLCTYETRRKRDVIRHITVVHKKSSRYLGKITASLEIRAIKKPIDFV
                     LNKVAKRGPSREEAKHNDSKQDGTSNSPSKKYEVADVGIEVKVTKNFSLHRCNKCGKA
                     FAKKTYLEHHKKTHKANATNSPEGNKTKGRSTRSKALVCLAKPSPRSAAILRPPAGAV
                     TTRQAASSCRAKLRGAARERQHAARALGRSAAP"
     exon            667..762
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
                     /inference="alignment:Splign:2.1.0"
     exon            763..906
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
                     /inference="alignment:Splign:2.1.0"
     exon            907..2593
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
                     /inference="alignment:Splign:2.1.0"
     exon            2594..7695
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
                     /inference="alignment:Splign:2.1.0"
     regulatory      5492..5497
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
                     /note="hexamer: AATAAA"
     polyA_site      5515
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
                     /note="major polyA site"
     regulatory      5731..5736
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
                     /note="hexamer: ATTAAA"
     polyA_site      5751
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
                     /note="major polyA site"
     regulatory      5846..5851
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
                     /note="hexamer: AATAAT"
     polyA_site      5876
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
     regulatory      7213..7218
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
                     /note="hexamer: ATTAAA"
     polyA_site      7234
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
     regulatory      7624..7629
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
                     /note="hexamer: AATAAA"
     polyA_site      7646
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
     regulatory      7664..7669
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
                     /note="hexamer: AATAAA"
     polyA_site      7695
                     /gene="Zfp800"
                     /gene_synonym="Znf800"
ORIGIN      
        1 agtcgctccc tgtcgcagcc ggagacttct ctgcttcccc cttcctaccc tctctgcacg
       61 gcggtcgctc gggctgtccg gggaaggggc ggccacgaga gaacgggact gacttccata
      121 aagtttcccg aagcatctgc tacccgcaag gccccaggtg ggggacccgc gcggctcccc
      181 gcccctctcc aaagcccggg ggaccgttgc aggtggagcg gcgcggcgct gaggggagcc
      241 gggctcggcg cggccgttgc cctggcgagg ggcgcctcag tcctgcctgc tccggttcca
      301 gctccttcgg ctgctgcgcc cggcggttcg tcctgtcaac tgcctgcgcc cgcgcgccgc
      361 cagctcgccg gcccggagcg cggagggctg ccgtgagccg ccgccaccgc cacagccgcc
      421 accgcagccg cggcccgagg acgtggtgag ctgtggcgct tccgcgtcgg cgccgccggg
      481 gactctttgg gagcgcgccg gggccgaagc ccgctcggct tcacgcgctg cgccggggct
      541 gcgccagcca agccgcaatg aagagcttct cacagtgaaa ggaaaatagg tcgcacccgt
      601 taaaaatgcc tttgagggac aaatactgtc aaacggacca ccatcatcac ggatgctgcg
      661 aaccagttta tatcctggag cctggagatc ctcccttgtt acagcaacca gtgcagacat
      721 ccaaatctgg tattcagcaa ataattgagt gctttcgatc aggaaccaaa caacttaaac
      781 atattttatt aaaagatgtg gacactattt ttgaatgtaa attatgccgt agtctcttta
      841 gaggattacc aaatttaatt acccataaaa aattttactg cccaccaagt ctccaaatgg
      901 atgacaatct tcctgatgta aatgataaac aaagccaagc cataagtgat ctcctagaag
      961 ccatatatcc aagagtggac aagagagaat atattattaa gctagaaccc atagaaacca
     1021 accaaaatgc agtgtttcaa tatatttcaa ggactgataa ccctgctgaa gtgaccgagt
     1081 caagcagtac acctgaacaa actgaagttc aaatacagga gacaagctca gaacagctga
     1141 aagcagtccc cgacgcagat acagaggtgg aggaggccat agagcctcct tctatagaga
     1201 ctgttgtaga tgaagctgca gctcccactg aggagcaacc tcaggaatca caggctgact
     1261 tggagacgtc tgacagttct gaccttggtc accagttgat atgttgtctt tgtagaaaag
     1321 aattcaattc tagacgaggt gttcgtcgtc acattcgaaa agtacacaaa aaaaagatgg
     1381 aagaactaaa aaaatacatt gaaacacgga agactccaaa ccagtcttca aaaggacgca
     1441 gtaagagtgt tctagtttca ttaagtagga gctgtccagt ttgttgtaaa tcatttgcta
     1501 caaaagcgaa tgtaaggagg cattttgatg aagttcacag aggactaagg agggattcaa
     1561 ttactcctga tatagcgaca aagcctgggc agcctttgtt cctggattct gcttctccta
     1621 aaaaatcttt taagactcgc aaacaaaagt cttcaaaggc tgaatacaat ttaactgcat
     1681 gcaaatgcct cctttgcaag aggaaataca gttcacaaat aatgcttaag agacatatgc
     1741 aaattgtcca caagataact ctttctggag caaactctaa aagagagaaa ggccctaata
     1801 atactgccaa cagttcagaa gtaaaagttg agctagcaga ttctgtagag tcttcacccc
     1861 cttccattac ccattctcca cagaatgaac tcaagggaac aaatcattca aatgaaaaaa
     1921 agaacacacc agcaacacag aaaaacaaag ttaaacagga ctctgaaagc cctaaatcag
     1981 ctagcccttc ggctgcaggt ggccagcaaa aaaccaggaa accaaaactt tcagctggct
     2041 ttgactttaa gcaactttac tgtaaactct gtaaacgcca gtttacttcc aagcagaact
     2101 tgactaaaca cattgagttg cacacagatg gaaataacat ttatgttaag ttctacaagt
     2161 gtcctctctg cacttacgaa acccgtcgga aacgtgatgt gataagacat ataactgtgg
     2221 ttcataaaaa gtcatctcgt taccttggga aaatcacagc cagtttagag atcagagcta
     2281 taaaaaagcc tattgatttt gttctaaaca aagtggcaaa aagaggccct tcaagggagg
     2341 aagcaaaaca taatgactca aaacaggatg gcacttccaa ttctccaagt aaaaagtatg
     2401 aagtagccga cgtcggtatt gaagtgaaag tcacaaaaaa cttttctctt cacagatgca
     2461 ataaatgtgg aaaggcattt gccaaaaaga cttaccttga acatcataag aaaactcata
     2521 aggcaaatgc taccaattca cctgaaggaa acaaaaccaa aggccgaagt acaagatcta
     2581 aggctcttgt ctgcctggcg aagccgtcgc cccgcagcgc cgccatcctg cgtccgcccg
     2641 cgggcgccgt caccacgcgc caggccgcct ccagctgccg cgccaagctc cgcggcgccg
     2701 ccagggagcg ccagcacgcg gcgcgcgccc tcggcaggtc agccgccccg tgacgccgcc
     2761 gcgcgctccc gcggccgcgc gcaccgccgt acctcgggcg cccaggtcgt ctgcatccac
     2821 ggccgcctcg gcgtcgtcgt cgctggtcgg agcgcctcag ctcgcccccc gctgctgccg
     2881 cagcctgctc tgccacgcgg gacgccgggc cactccttgc tccgtgcgat gcgtttcttc
     2941 agcccgcctg caaaatcccc ggcttcttta aaaacctcac cgcacatgat tccgtttccc
     3001 tatttcttgt aactactctc tgttcccttt cagattcttt ccattattag ttcttcaaag
     3061 ccagcatcgt tttcttcatt aagctctcat caagctccac ctcccactcc catctgccag
     3121 aagattctaa tggtccaaat tcatgataca acccagagtt gtatcatgca catctataat
     3181 tgaactcaag cgtcaggctt tccccttcct gtaactttat cgccaatagc cattgctccc
     3241 tgtggaatta gtccttgttt ccaaggactc gtcatcctaa actcaccatc cttagaaacg
     3301 ggatcctctc tagaatattg tcgccggtga ccacaggacc gtgcctttcc atagctgctc
     3361 cgggaaggct tgttggctta gcccctcttt ttttcccagg ccctctgtcc caggctatac
     3421 atggatgtct tacttctctt gggctattcc cagtgactgg tcacagttaa agtcgtgatg
     3481 gcccaatcat gtgacattca tggtccctca gtgagctatt ggggaccctt caactcctgg
     3541 ccacagcttc cttagaactc ccggcttcag tctgtatccc ctctagcctt tcctaggtat
     3601 gtcagacctg cgttatggct tcttcaagat ctctgctctc ctcttgcttt cttttgtctt
     3661 tctcaggtgt cccctcaaca caactgctgc acagtgacct ttgtcttggt gtctgctgct
     3721 aggatctgaa ctgacacatc agacattcca gtctctgacc accaccttcc tatcctgagt
     3781 tgtttgctga cctcattttt ctactgttga gtaggccatg tcttggctct atttccttga
     3841 ctagcccaga ttctacagtc tattatcgta atcatgcctc gaaatgcaaa ttctctcagc
     3901 actctcaaac ctcagtttct tcgaaattat ttttctagca aaaaaatatc caaccctggg
     3961 tataggtaac ttctgtcttg ctctagccag actgtaacaa cggatttcgt ttaagaagaa
     4021 atcatgaaac caaccaacct gttcaatttc caagacatta ttgcaaatcc taaattggtg
     4081 ttttttccta tggtcgtctc agtccttcac ttttagacct actgtttctt tgcatgaatc
     4141 tccccagaat gtgccgtttg ttttgatatt tccctgagaa ctaagagtta tagacagagc
     4201 tcctcagctc cctactacag tgcgtggaac tgatctattt tgtgactgtg aagggagccc
     4261 cttcttctct cagtgccctg agtctcactc cctcttgctt tttgaaaaac ttcaggttct
     4321 cttctttctc tcttctgtac catcattctc cccacctctt aattatcagt tgcagtaaag
     4381 ggtgtcacca ttcagcaaca atttgggggt catctttgct acttttatga ctagttcctt
     4441 acaaagcaac ccatcttaat cgatcagttt tattgctcaa atatgccttt ttgttttttg
     4501 tttttgtttt tgtttttgtt tgttttgaga aaggagctct cgtacacata gtgctgattc
     4561 gcctggaact cactatgtaa caggttagct ttgaatttgt aacaatgtct ttgcttctgc
     4621 ctcctaaacc ctggattaca ggtgtgtaca atcatgcctg acttaaaatt gactttaatt
     4681 tgtctccttc caaactcagt gctatgacca acatattttc tcatgcctgg tctctcgggt
     4741 accacttttg acatacttta gtaccttttt gataacctgg taatagtgac ctttctcatc
     4801 cattaaatca aatcatctat tgcttgtaga ataaaattga acccccttac catggctcac
     4861 aaaaccatgc accatctgac ccttttctag ttcttgaaca gcctctggac ccttctctca
     4921 ctgtttacca tgcgtgccca tgtaacatgc caagcaagtt ttttttttct gtacctcagg
     4981 gggttagtaa atgctactat ttctaagctg cttttcatgg ccaccctctc tcctccatta
     5041 caatttatcc tgtagatggg tgcagagttt tgagagaggc ctccctggag taccatgttg
     5101 aagtagtcat gacctcccaa ccatttcctc tcccagttct ttatttgtaa tcttatttat
     5161 ttgttgactc tgacttatct ccacttcccc attccagaat gtatgaagga agaaatagtg
     5221 tgtggatgtc tggattcttc aacactgcat tctctgtcca tagccgattt ggtgcatatt
     5281 aggtgcacaa tcaatgtctt gaaagaatac atgaatacat atgcaaattt ctctgttggg
     5341 gattcacttt ctattgatgt agtaaaagtt gtttatatat taaaaccact aatcatttgt
     5401 ttattctgtt tgttgcagac atttcttccc caatttgtgc cagtttaatt cttaatgtct
     5461 atgatgtaca gaaatactgt attttcacaa caataaatac cctttatgaa tcctgcaccc
     5521 ggtgatatgt ttaaaaaatc tccatgtcag tgttacatgc atgtttgttt cctttcattt
     5581 taatttttta gatttaaata ttttctctaa atggaattta tttttggtat agatgtataa
     5641 gggcctaagt atttatttag tcgttacatc atcatttatt gaaagttctc tcttttttct
     5701 actgttttga atatttcaca tttatcagat attaaatttc ttatacctag agcggtttct
     5761 ggatttgtta cttctttgtt gttcctgatg ctgttatttt aactattgtc ctgccgttgg
     5821 ttgctatgct gtgtgtttac aatgaaataa tattactctt attttttaaa aaattatttt
     5881 tgtgttttgg ctgtttttgc atctattctc ctcaataagc tttagttata ttttggtaaa
     5941 gtccaaaaga aagtctcttg ttgttttgtt taggattgct ttaagattat gattatttga
     6001 aaaatagttg tgaagatttg tactctttac aactattgag gaacttgtca catgtcaagg
     6061 tcaccgaaga caccttgtat gtccttcagg tcttctgttt ttaatgtggc acaaacttat
     6121 tggttatatt ttaccttctg ttgctgtttg actgtgatca gtttttcatt tttaagagct
     6181 tttataaaag ctgttccttg tagggtcact tgattttttt tttttgataa cttttcatat
     6241 cgctcactaa tctttactga ttcatttcta catagccagt cattttaaag aaaatatatg
     6301 atcatttctt gtttttttgg ctgtgcttac acctcatcaa atatgtgatg gtaatagctt
     6361 tgctcttatt cctgacgttt taggaatgcc tccatcagta ttttatcaga ttttaatatt
     6421 aactactgaa ctaaaataca ggccttcagg caaaggacat ggctttctgg ttcaagtata
     6481 ccaaacatta ttttagaagt tcatgttgaa taatattaat cattctagac aactagagat
     6541 tatcatagag ttttattttg ttgtctgtca ccacaatgtc taatgtcaca aaaaataatt
     6601 attattaaac gatttcctaa ttccaggctc tttctgcata agatacagtc tgtaatcatg
     6661 gtgaactttc ccttcatttt aaagtacatg agtacatttt cccccattta tatatatgag
     6721 tacagtgcca ctgtcttcag aaccccagaa gaggacatcc gatcccatta gagagggtca
     6781 tgtgtcacca tgtggtcgct gggaaacaaa cagcatttta aagtataata atgtcaaatt
     6841 aaacgcctat attttaagtg gggttattac acttatattc ataaaaaaga ctagattgta
     6901 gtctcatatt tttgtattct ctcttagatt cagaagtggg gatctctctt gtttttatga
     6961 tataaagtag cactgtagga gctgtctggt ccttgatggc tgggagaacc cccccccaca
     7021 cacacacaca cacacaacac tgtttataag gtaaaaggta attctctgaa atttttgaaa
     7081 agttctatgg ttttgtccta tacaggcaac catacttctt gaatagcaac tttaaaatta
     7141 tatttttaaa agaaagtcat gcattttcat agaatttaaa gctgttagat ttctgcatat
     7201 atttatctta aaattaaaaa tatttttctc tgcatctgtg attgtagtgt tttcttattt
     7261 ctgaactttt tagtgcttag ttatattttt tattttatta gtcttgccag tctctttaag
     7321 gaatcaacac ttaaatactt tattatctct agtttttctg tttatatcaa tataattatt
     7381 tatctctagt tccttcctca tctttaatgc ttagttgttt tacaaatgtt tctttgtaat
     7441 tgatgtctta gataatttta aaatttctta tttaataata ggacataaga ctataagctt
     7501 aaatctgggc acagctttgt tatgtagcct cttactgtta cagtagctgt ctctatttca
     7561 tttttaactg gtgtaattta caatagtgtt ttgagttttt tccctgttaa tccttctttc
     7621 tttaataaaa agtaagttta ttaatattta cgttgctatt tttaataaag agctaatttt
     7681 atttgtaaga agtaa
//
