LOCUS       NM_001013012            1893 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus zinc finger protein 787 (Zfp787), transcript variant
            2, mRNA.
ACCESSION   NM_001013012 XM_355849
VERSION     NM_001013012.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1893)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1893)
  AUTHORS   Wiese,C.B., Ireland,S., Fleming,N.L., Yu,J., Valerius,M.T.,
            Georgas,K., Chiu,H.S., Brennan,J., Armstrong,J., Little,M.H.,
            McMahon,A.P. and Southard-Smith,E.M.
  TITLE     A genome-wide screen to identify transcription factors expressed in
            pelvic Ganglia of the lower urinary tract
  JOURNAL   Front Neurosci 6, 130 (2012)
   PUBMED   22988430
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC026949.21.
            
            On Mar 28, 2020 this sequence version replaced NM_001013012.1.
            
            Transcript Variant: This variant (2), as well as variant 1, encodes
            the longer isoform (a).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK077458.1, BC137753.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849379
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-121               AC026949.21        211273-211393       c
            122-210             AC026949.21        198490-198578       c
            211-1893            AC026949.21        186917-188599       c
FEATURES             Location/Qualifiers
     source          1..1893
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 3.55 cM"
     gene            1..1893
                     /gene="Zfp787"
                     /gene_synonym="2210018M03Rik; Znf787"
                     /note="zinc finger protein 787"
                     /db_xref="GeneID:67109"
                     /db_xref="MGI:MGI:1914359"
     exon            1..121
                     /gene="Zfp787"
                     /gene_synonym="2210018M03Rik; Znf787"
                     /inference="alignment:Splign:2.1.0"
     exon            122..210
                     /gene="Zfp787"
                     /gene_synonym="2210018M03Rik; Znf787"
                     /inference="alignment:Splign:2.1.0"
     CDS             132..1277
                     /gene="Zfp787"
                     /gene_synonym="2210018M03Rik; Znf787"
                     /note="isoform a is encoded by transcript variant 2"
                     /codon_start=1
                     /product="zinc finger protein 787 isoform a"
                     /protein_id="NP_001013030.1"
                     /db_xref="CCDS:CCDS20769.1"
                     /db_xref="GeneID:67109"
                     /db_xref="MGI:MGI:1914359"
                     /translation="MELREEAWSPGPLDSEDQQMASHENPVDILIMDDDDVPSWPPTK
                     LSPPQSAPPPGPPPRPRPPAPYICTECGKSFSHWSKLTRHQRTHTGERPNACTDCGKT
                     FSQSSHLVQHRRIHTGEKPYACSECGKRFSWSSNLMQHQRIHTGEKPYTCPDCGRSFT
                     QSKSLAKHRRSHSGLKPFVCPRCGRGFSQPKSLARHLRLHPELSGPGVAAKVLAASVR
                     RAKAPEEATAADGEIAIPVGDGEGIIVVGPPGDGAAAAAALAGVGTRATGTRSRRAPA
                     PKPYVCMECGKGFGHGAGLLAHQRAQHGDGLGVAVGEEPAHICVECGEGFVQGAALRR
                     HKKIHAVGAPSVCSSCGQSFYRAGGEDDGEDQSAGARCAECRGGEAR"
     exon            211..1893
                     /gene="Zfp787"
                     /gene_synonym="2210018M03Rik; Znf787"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1867..1872
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp787"
                     /gene_synonym="2210018M03Rik; Znf787"
                     /note="hexamer: AATAAA"
     polyA_site      1893
                     /gene="Zfp787"
                     /gene_synonym="2210018M03Rik; Znf787"
                     /note="major polyA site"
ORIGIN      
        1 acttccggcc tgggcgcccg tccccctgac cccagggtct gagtcgccgc tgccgccgct
       61 gccaccatcc gcgaggcagg cgagaggaag agtgcggcgt gacggccccg gggccgcgga
      121 gggacccaga tatggagctt cgagaagaag cttggtctcc ggggccactg gattctgagg
      181 accagcagat ggccagtcat gagaacccag tggacatcct catcatggat gacgatgacg
      241 tccccagctg gcccccgacc aagctgtccc caccccagtc tgcacctcct cctgggcccc
      301 cgcccaggcc gcggccacca gcaccctaca tctgcactga gtgtggcaaa agcttcagcc
      361 actggtcgaa gctgacacga caccagcgca cgcacacagg cgagcggccc aatgcctgta
      421 ccgactgcgg caagaccttc tcgcagagct cgcatttggt gcagcaccgg cgcatccaca
      481 caggcgagaa gccatatgcc tgctcagagt gcggcaagcg ctttagctgg agctccaacc
      541 tcatgcagca ccagcgcatc cacacgggcg agaagcctta tacttgcccc gactgcggcc
      601 gcagcttcac acagagcaag agcctagcca agcaccggcg ctcccacagt ggtttaaagc
      661 ccttcgtgtg tccgcgctgc ggccgtggct tcagccagcc caagagcctg gcacgccacc
      721 tgcggttgca cccagagctg tcagggccag gtgtggcagc caaggtgctg gcagccagcg
      781 tgcggcgcgc caaggcaccg gaggaggcca cagcagcgga cggcgaaatc gctatcccag
      841 tgggcgatgg cgagggcatt attgtggtgg gcccgccagg ggatggtgct gcagcggccg
      901 cagctctggc tggggtgggg acgcgggcaa cggggacacg gtcgcgcagg gcgccggcgc
      961 ccaagccgta tgtgtgcatg gagtgcggga agggttttgg gcacggggct gggctgttgg
     1021 cccaccagcg cgctcagcac ggggatgggc tcggggtagc ggttggtgag gagcctgcac
     1081 acatctgcgt ggagtgtggt gagggctttg tgcagggtgc cgcactgcgg agacacaaga
     1141 agatccatgc agttggggcg ccttcggtct gcagcagctg cggacagagt ttctatcggg
     1201 cgggtggaga ggacgatgga gaggaccagt cggctggtgc gcggtgtgcc gaatgtcggg
     1261 gtggggaggc ccggtaggga cggggaggcc cggggggtgg acagggcccc tcgggctcgg
     1321 tgggaactac cagtgtgcaa gaccacgagg gaggcccaga gagaatcaga ccgaaaggaa
     1381 cagcggcctt gtctccttcc ttactccgtg ctgttctggg tgtgagggga cctgcaacta
     1441 ttgggttctc aggactgtcc acagcctctc tgccgacccg ccctaccgcc tggtgggctg
     1501 gccctttgta ggtttccatt ctgggagcca gagactgaga gaactgcaag gatcaattgg
     1561 cactagaccc tcaagggaaa gaccaccccc actacaggtg ttgggctgcg gtgtcgtaag
     1621 aaatggaggg aatcctggcc ttatgcatca aaagggcttc cttcccttct agaattttct
     1681 tttaatcata ctgtctgacc cgtcccatcc attatttttt ctgcccccca tgggtcctta
     1741 tcaattttct agcccaagtc gttcctcttc ctcttggatt tgcagtagca gaggcgtgaa
     1801 gtagcctcct gttcccagca cggtcttatt gagaggtcct ggcagtggaa aaagggatgt
     1861 gggggcaata aatggcatta ttcaattgtc cca
//
