LOCUS       XM_030242686            5663 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus zinc finger protein 78 (Zfp78), transcript
            variant X3, mRNA.
ACCESSION   XM_030242686
VERSION     XM_030242686.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000073.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030242686.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5663
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="7"
     gene            1..5663
                     /gene="Zfp78"
                     /gene_synonym="A330079D15; KRAB12; Zfp77"
                     /note="zinc finger protein 78; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     ESTs, 64 long SRA reads, 15 Proteins, and 99% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 1 sample with support for all annotated introns"
                     /db_xref="GeneID:330463"
                     /db_xref="MGI:MGI:107783"
     CDS             1010..2548
                     /gene="Zfp78"
                     /gene_synonym="A330079D15; KRAB12; Zfp77"
                     /codon_start=1
                     /product="zinc finger protein 471 isoform X1"
                     /protein_id="XP_030098546.1"
                     /db_xref="GeneID:330463"
                     /db_xref="MGI:MGI:107783"
                     /translation="MTVELMKAMLQEAVTFNDVAIDFSPEEWDWLNPAQRSLYRTVVL
                     ENYRNLVSVGACISKPSLISLLEHGKEPWEVKGQVTGSRVQGGKSVQKTHELSLRQLV
                     FEDVAVENTTSLGCESLTSGRKQKCKDLLDRQMSQEIFNLKETVTHKGTHTKEIGYKH
                     TESLKSAHLDSVEENIYTHKSNKKSFSKNPKVWKYKKIWAGKTIFKCNECEKTFTHSS
                     AVTVHQRIHTGEKPYQCTVCGKAFKQSHHLAQHHTTHTHEKLFQCEECKKAFSQNSYL
                     TVHRRIHTGEKPYKCKECAKSFRQPAHLAQHHRIHTGEKPYKCEICGKAFNHSMSLTG
                     HQRVHSGEKPYKCKDCGKAFRQSIHLVVHSRIHTGEEPYECNECGKTFRESSQLTIHQ
                     RNHTGEKPFECKQCGKFFNRSAYLARHQKIHTGEKPYECNECGKTFTHAAYLIRHKRV
                     HTGEKPYKCAECGKAFGDGSSRAQHQRLHTGQRPYVCEKCGRAFRRKSSLNCHQRYHT
                     GKKL"
ORIGIN      
        1 caagctccgc cctcacctcc ggaggcggag accaaccgtt cttgctaagc cccgccctca
       61 cctcggattc ttctgagaac ccgcccctcc tctaatccct gccctcacct cacctcacac
      121 agagctgaga acccgcccta cttgataacc ccgcccctca cctaatacgg ataagctccc
      181 gccccttacc cacttagtac cgccctctcc agggactctg ctgagaacac gccccttctc
      241 caccaagccc cgccccttac tccagtttct tctgggaacc ttcctatcta agcccagccc
      301 ctcacatcaa acttctgaga cccttgctct tctctgctta gctttgcctt caccctcagt
      361 ctaagaaact gttctccgta gtacccgctt ctcatcgcag acttcgctga gtacacgccc
      421 cttcagcccc acctttctca gattaagctc ttaggtcgtc gctggcagag gctgcgcttg
      481 cgcacacata gcttgtagga aacctcccag cgttcctcgg ttgacagcgt ctgggtaagg
      541 cagctagcgg gcgcttgtta gggagtggga gcccgagcgc tgcgggcagg ggagatcctc
      601 gtggtccctg tgttttctgt ctggagactc aaggtagttt cagagtcggt gctgatcatc
      661 gcagacgcta aacgggatta gaggatcagt cccaaacccc atccaggaga ggacaggagc
      721 tgaggttgat caccagatgc cagtcctttt gttgatgttt cgagacagaa tgtcatgtaa
      781 tccagcagtc ctcaaactct ttatttccct aatccctgag aggatgggtt ggaggaagac
      841 atcccattta ggactgcgtg ttccaagatc tctcgctctg tgtacactgt ccaggagctt
      901 gtctttgtgt cagttctcat ctcctgccag aggacgcttc tttgataatg ggttggactt
      961 cccaggatac agttgttctc caagagagaa gccaggagga ggataagaca tgacagttga
     1021 actaatgaaa gccatgctac aggaagcagt gacattcaac gatgttgcaa tagacttttc
     1081 tccggaggag tgggactggc tgaatcctgc tcagaggagt ttgtacagga ctgtggtgct
     1141 ggagaactac cggaacttgg tctctgtggg agcttgcatt tccaaaccat ctctaatctc
     1201 cttattggaa catgggaagg agccttggga ggtgaagggt caggtgacag gaagcagagt
     1261 acaaggtggt aaatctgtac agaagacaca cgaattatct ctcaggcagt tggtgtttga
     1321 ggatgtggca gtggagaaca ctacaagtct tggttgtgag tctctcactt ctggaaggaa
     1381 gcagaaatgc aaagaccttc tggatagaca gatgagtcaa gaaatattta acctgaaaga
     1441 aacagtcact cacaaaggaa cccacactaa agaaataggc tacaaacaca ccgaatcctt
     1501 aaaatctgcc catctggata gtgtagaaga gaatatttat actcacaagt caaataagaa
     1561 aagcttctcc aaaaatccca aggtatggaa atacaagaaa atctgggcag ggaagaccat
     1621 ttttaaatgt aatgaatgtg agaaaacctt cacccacagc tcagctgtta cagttcacca
     1681 gagaattcac acgggggaga aaccatatca atgcaccgtc tgcggaaagg ccttcaagca
     1741 gagccaccac ctggctcagc accacacaac acacacccac gagaaactct tccagtgtga
     1801 ggaatgtaag aaagccttca gccagaattc atacctcact gtacaccgga gaattcacac
     1861 cggagaaaaa ccgtataaat gtaaggagtg cgcaaagtcc ttcaggcagc ctgcccacct
     1921 ggctcagcac cacaggattc acacgggtga gaaaccttac aagtgtgaaa tctgtgggaa
     1981 agcctttaac cacagcatgt cactcactgg ccaccaaaga gtacattctg gagagaaacc
     2041 atataaatgc aaggactgtg ggaaagcttt tcggcagagt atacaccttg ttgttcactc
     2101 aagaattcat actggagaag agccctatga atgtaacgaa tgtgggaaga cctttaggga
     2161 gagttcccag ctgactattc atcagagaaa ccacacggga gaaaaacctt ttgaatgtaa
     2221 gcagtgtggt aaatttttca atagaagtgc ctatcttgcc agacatcaga aaatccatac
     2281 aggagagaaa ccttatgagt gtaatgaatg cggcaaaacc ttcacacatg ctgcctatct
     2341 tataagacac aagagggtcc atactggaga gaagccttac aaatgtgcgg aatgtggaaa
     2401 ggcatttggt gatggctcct cccgtgctca gcatcagaga cttcacactg gtcagaggcc
     2461 ctatgtatgt gagaaatgtg gaagggcctt cagaagaaag tcatccctta attgccacca
     2521 aaggtatcac actggaaaga aactgtaaaa atgtgtcccc catggcaaac cctttagccg
     2581 cctacgaacc tgtagcgttc atcagagaat ttagctttca accagattgt tcactgtact
     2641 ctacatggaa gatctcacac aggtcaaaga gctcttagga atgtaaggga tggggagaaa
     2701 tcttcagtaa atgttcctaa accacccatc attggtgagt tcttgatgca gtcatctcag
     2761 gcatccctcc ctgtcctcag gtcctgtgca tatacctgct aagtatttcc atttaggttt
     2821 ggccccttag cctcctgatc caaaacacaa ttgttttgct tggacttttt caaatgtctg
     2881 taatccatct tgtttccttc aagtttatta ctcatttatt ttacagtcag aaaatttctt
     2941 tttaaaaata tacatgttat ttatgtaact cttctaatac tcattgtaaa atgtttattt
     3001 aatgcacata aaatgtttag ccacatgatt gactgtatta agtttggatg gagaacatcc
     3061 cttcaatgat taggagacac atcagcacag aacacagaga ggccacacac agaggcaaag
     3121 gaacatgagg gggtatccct gagccaatgc tttattgggc ccagggttac agatttcctt
     3181 tgttgagtcg caacaagcag gcatgagttc tgggaggtca tctcaggtgt agaaagtgat
     3241 cattgcgaca tatgtgccca gtccatcttc agcagtgcat ttaaagggag cagtgaaggc
     3301 aggcagcccc ctttgacggg ttcttgttct tggcaccagc ttgagccact tgtggatggt
     3361 gtgatactag gaagtgtcaa aggtgactga cctacacctc cagcctggga aagttaaaac
     3421 ttcaatgaaa tagataccaa gagaacataa aatgaaagga cttcaataca ctgacccata
     3481 ggggtgctta gaaaatgtgt tagaccagaa aaattatttc taaaccatgg cctctcaaat
     3541 ttggaactta ggtgatgaca acaatttaga aactgaaagt gtcttcaggt ggaacaatta
     3601 gtatgtgtag tgtatttaag atggaagctt tctaatgatc ctaaaggtta tgttttctta
     3661 ttggtaaaga aattaaatct ggtctggtac gtagaatctg ttttaggaag tgcctagaag
     3721 ttaaagactg gaacaaagaa ttagaattta tttgggaaaa aatacacatg tgtatatata
     3781 gtctaggtca caaaagaaac attcttatat ttactaacaa gcccccagca ggccagtcta
     3841 gccgaaacag ggagccccag gcttaccatg agatcctatc tcaaaatgta aggtggaggg
     3901 cgacagactc ccaacaccga ctaatggtct ccacacacac gcacatgggc aatcaagcct
     3961 acaaatgcat atatacaaat aaataaataa aagtaaaatt tgaaagggtg attgtggctg
     4021 tgtttggagg cacacacatc tcatttcagc actctggagg tagagacaga tgggtctctg
     4081 agttagagat cagccaggtt tacagagttc tagggcagtc agggctacat agcgaggcct
     4141 tggataaaaa caaactgaaa gatcacatgc aagatgagta cacactgcag aaataggaaa
     4201 acaggggaca caaacttcca ttctcgttgt tccagaggac tctgggtggt ttttgtaaag
     4261 tccatctcat ggtaggttct gttggactgt atgcctgcct ttccttgttt atcctaagtt
     4321 cattctcttc ctctaccccc cacccaattt gttatcaaat tgccagggct ggcgagatgg
     4381 ctcagtggtt aagagcgctt gctggttttg cagaggactt ggatttgggt cccagcaccc
     4441 atatagcagc tcacaactgt ctgtaaccca acttccaggg gatgctcttt tctgggctcc
     4501 acaagaactg taggcacgca atgcacacaa tacatgaaga caaaacactc atccacataa
     4561 aataaaagca agtctttcag gggctggaga gatggctcag atgttaagag cagtctgctc
     4621 ttcccaaaat cctgagttca attcccagca accatatggt ggctcacaac catttatcct
     4681 gggatctgat gccctcttct ggaaagcgga tgtacataca gatagagcat catttacata
     4741 aaataataaa ccaacctttc aaaaaatctt tgtggtgaca atgctgcaat attgtttttg
     4801 cttaagaatt ttttagtata aaatttcctt ctggttatat gaggtgtttg tgaagcataa
     4861 atggttttat atttagatgt tggtttcttt tctaaaatat ttcattacgg tatgcacata
     4921 tttaccactc agaaaaaaaa ataacacttt tgttctcaaa cattttatat aaagaatatt
     4981 ctgcttgctc agcggtagtg acacacactt ttaaaaccag cccttccaga ggcagaggca
     5041 ggcagatctc cgagttcgag gccagcctgg tctacagagt gagttccaga acatccagag
     5101 ccacacaaca ctctctcaga tgataactga atgacaaaaa taggcagctc acagtcctaa
     5161 atgggacatt cttgtatacc ttctcaaggg tctgggaaca tcgtattaga cgaaggagaa
     5221 agaatgtaag agtctgagaa tggcaaggag tgctgtggaa tggttttggg catgttgtgc
     5281 tcatgaactc atagaaactg attaccagca caagattgct ggtaattacc agcgccgatc
     5341 aatattatag ccattgatag aggaagggcg tacccctcca cacctagctg aggagctata
     5401 agcaaatgat ggcagctgag agagtgggag tcatttttct ttggggatgt ggcctctggt
     5461 agattgttca tgtcacactc cactggtata ctggtaggcg gcactaacag ggctatattt
     5521 aaaaaaaaag tgtggtgggg tggcaaaagg aatgtggaag tattggggat ggttgggaga
     5581 ggagatgtgt tggatatgat caagatacag tatatataca tgtatgaaac cgacaaagaa
     5641 taaactgcgc tcccctcacc tca
//
