LOCUS       NM_001025163            4751 bp    mRNA    linear   ROD 14-OCT-2021
DEFINITION  Mus musculus zinc finger protein 78 (Zfp78), transcript variant 1,
            mRNA.
ACCESSION   NM_001025163
VERSION     NM_001025163.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4751)
  AUTHORS   Yokoyama S, Ito Y, Ueno-Kudoh H, Shimizu H, Uchibe K, Albini S,
            Mitsuoka K, Miyaki S, Kiso M, Nagai A, Hikata T, Osada T, Fukuda N,
            Yamashita S, Harada D, Mezzano V, Kasai M, Puri PL, Hayashizaki Y,
            Okado H, Hashimoto M and Asahara H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   2  (bases 1 to 4751)
  AUTHORS   Okazaki N, F-Kikuno R, Ohara R, Inamoto S, Koseki H, Hiraoka S,
            Saga Y, Seino S, Nishimura M, Kaisho T, Hoshino K, Kitamura H,
            Nagase T, Ohara O and Koga H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: IV. The complete nucleotide sequences of 500 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 11 (3), 205-218 (2004)
   PUBMED   15368895
REFERENCE   3  (bases 1 to 4751)
  AUTHORS   Carninci P, Waki K, Shiraki T, Konno H, Shibata K, Itoh M, Aizawa
            K, Arakawa T, Ishii Y, Sasaki D, Bono H, Kondo S, Sugahara Y, Saito
            R, Osato N, Fukuda S, Sato K, Watahiki A, Hirozane-Kishikawa T,
            Nakamura M, Shibata Y, Yasunishi A, Kikuchi N, Yoshiki A, Kusakabe
            M, Gustincich S, Beisel K, Pavan W, Aidinis V, Nakagawara A, Held
            WA, Iwata H, Kono T, Nakauchi H, Lyons P, Wells C, Hume DA,
            Fagiolini M, Hensch TK, Brinkmeier M, Camper S, Hirota J, Mombaerts
            P, Muramatsu M, Okazaki Y, Kawai J and Hayashizaki Y.
  TITLE     Targeting a complex transcriptome: the construction of the mouse
            full-length cDNA encyclopedia
  JOURNAL   Genome Res 13 (6B), 1273-1289 (2003)
   PUBMED   12819125
REFERENCE   4  (bases 1 to 4751)
  AUTHORS   Marine JC, Gilbert DJ, Bellefroid EJ, Martial JA, Ihle JN, Copeland
            NG and Jenkins NA.
  TITLE     Chromosomal location of fifteen unique mouse KRAB-containing zinc
            finger loci
  JOURNAL   Mamm Genome 7 (6), 413-416 (1996)
   PUBMED   8662221
REFERENCE   5  (bases 1 to 4751)
  AUTHORS   Bellefroid EJ, Marine JC, Matera AG, Bourguignon C, Desai T, Healy
            KC, Bray-Ward P, Martial JA, Ihle JN and Ward DC.
  TITLE     Emergence of the ZNF91 Kruppel-associated box-containing zinc
            finger gene family in the last common ancestor of anthropoidea
  JOURNAL   Proc Natl Acad Sci U S A 92 (23), 10757-10761 (1995)
   PUBMED   7479878
REFERENCE   6  (bases 1 to 4751)
  AUTHORS   Ihle JN, Smith-White B, Sisson B, Parker D, Blair DG, Schultz A,
            Kozak C, Lunsford RD, Askew D, Weinstein Y et al.
  TITLE     Activation of the c-H-ras proto-oncogene by retrovirus insertion
            and chromosomal rearrangement in a Moloney leukemia virus-induced
            T-cell leukemia
  JOURNAL   J Virol 63 (7), 2959-2966 (1989)
   PUBMED   2542606
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB603663.2, BY768295.1 and AK173164.1.
            
            Transcript Variant: This variant (1) encodes the longer isoform
            (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK134974.1, BC085322.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-304               BB603663.2         2-305
            305-386             BY768295.1         306-387
            387-4751            AK173164.1         311-4675
FEATURES             Location/Qualifiers
     source          1..4751
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 3.69 cM"
     gene            1..4751
                     /gene="Zfp78"
                     /gene_synonym="A330079D15; KRAB12; Zfp77"
                     /note="zinc finger protein 78"
                     /db_xref="GeneID:330463"
                     /db_xref="MGI:MGI:107783"
     exon            1..40
                     /gene="Zfp78"
                     /gene_synonym="A330079D15; KRAB12; Zfp77"
                     /inference="alignment:Splign:2.1.0"
     exon            41..131
                     /gene="Zfp78"
                     /gene_synonym="A330079D15; KRAB12; Zfp77"
                     /inference="alignment:Splign:2.1.0"
     CDS             99..1637
                     /gene="Zfp78"
                     /gene_synonym="A330079D15; KRAB12; Zfp77"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="zinc finger protein 471 isoform 1"
                     /protein_id="NP_001020334.1"
                     /db_xref="CCDS:CCDS20774.1"
                     /db_xref="GeneID:330463"
                     /db_xref="MGI:MGI:107783"
                     /translation="MTVELMKAMLQEAVTFNDVAIDFSPEEWDWLNPAQRSLYRTVVL
                     ENYRNLVSVGACISKPSLISLLEHGKEPWEVKGQVTGSRVQGGKSVQKTHELSLRQLV
                     FEDVAVENTTSLGCESLTSGRKQKCKDLLDRQMSQEIFNLKETVTHKGTHTKEIGYKH
                     TESLKSAHLDSVEENIYTHKSNKKSFSKNPKVWKYKKIWAGKTIFKCNECEKTFTHSS
                     AVTVHQRIHTGEKPYQCTVCGKAFKQSHHLAQHHTTHTHEKLFQCEECKKAFSQNSYL
                     TVHRRIHTGEKPYKCKECAKSFRQPAHLAQHHRIHTGEKPYKCEICGKAFNHSMSLTG
                     HQRVHSGEKPYKCKDCGKAFRQSIHLVVHSRIHTGEEPYECNECGKTFRESSQLTIHQ
                     RNHTGEKPFECKQCGKFFNRSAYLARHQKIHTGEKPYECNECGKTFTHAAYLIRHKRV
                     HTGEKPYKCAECGKAFGDGSSRAQHQRLHTGQRPYVCEKCGRAFRRKSSLNCHQRYHT
                     GKKL"
     exon            132..258
                     /gene="Zfp78"
                     /gene_synonym="A330079D15; KRAB12; Zfp77"
                     /inference="alignment:Splign:2.1.0"
     exon            259..354
                     /gene="Zfp78"
                     /gene_synonym="A330079D15; KRAB12; Zfp77"
                     /inference="alignment:Splign:2.1.0"
     exon            355..4751
                     /gene="Zfp78"
                     /gene_synonym="A330079D15; KRAB12; Zfp77"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtaggaaacc tcccagcgtt cctcggttga cagcgtctgg gttggacttc ccaggataca
       61 gttgttctcc aagagagaag ccaggaggag gataagacat gacagttgaa ctaatgaaag
      121 ccatgctaca ggaagcagtg acattcaacg atgttgcaat agacttttct ccggaggagt
      181 gggactggct gaatcctgct cagaggagtt tgtacaggac tgtggtgctg gagaactacc
      241 ggaacttggt ctctgtggga gcttgcattt ccaaaccatc tctaatctcc ttattggaac
      301 atgggaagga gccttgggag gtgaagggtc aggtgacagg aagcagagta caaggtggta
      361 aatctgtaca gaagacacac gaattatctc tcaggcagtt ggtgtttgag gatgtggcag
      421 tggagaacac tacaagtctt ggttgtgagt ctctcacttc tggaaggaag cagaaatgca
      481 aagaccttct ggatagacag atgagtcaag aaatatttaa cctgaaagaa acagtcactc
      541 acaaaggaac ccacactaaa gaaataggct acaaacacac cgaatcctta aaatctgccc
      601 atctggatag tgtagaagag aatatttata ctcacaagtc aaataagaaa agcttctcca
      661 aaaatcccaa ggtatggaaa tacaagaaaa tctgggcagg gaagaccatt tttaaatgta
      721 atgaatgtga gaaaaccttc acccacagct cagctgttac agttcaccag agaattcaca
      781 cgggggagaa accatatcaa tgcaccgtct gcggaaaggc cttcaagcag agccaccacc
      841 tggctcagca ccacacaaca cacacccacg agaaactctt ccagtgtgag gaatgtaaga
      901 aagccttcag ccagaattca tacctcactg tacaccggag aattcacacc ggagaaaaac
      961 cgtataaatg taaggagtgc gcaaagtcct tcaggcagcc tgcccacctg gctcagcacc
     1021 acaggattca cacgggtgag aaaccttaca agtgtgaaat ctgtgggaaa gcctttaacc
     1081 acagcatgtc actcactggc caccaaagag tacattctgg agagaaacca tataaatgca
     1141 aggactgtgg gaaagctttt cggcagagta tacaccttgt tgttcactca agaattcata
     1201 ctggagaaga gccctatgaa tgtaacgaat gtgggaagac ctttagggag agttcccagc
     1261 tgactattca tcagagaaac cacacgggag aaaaaccttt tgaatgtaag cagtgtggta
     1321 aatttttcaa tagaagtgcc tatcttgcca gacatcagaa aatccataca ggagagaaac
     1381 cttatgagtg taatgaatgc ggcaaaacct tcacacatgc tgcctatctt ataagacaca
     1441 agagggtcca tactggagag aagccttaca aatgtgcgga atgtggaaag gcatttggtg
     1501 atggctcctc ccgtgctcag catcagagac ttcacactgg tcagaggccc tatgtatgtg
     1561 agaaatgtgg aagggccttc agaagaaagt catcccttaa ttgccaccaa aggtatcaca
     1621 ctggaaagaa actgtaaaaa tgtgtccccc atggcaaacc ctttagccgc ctacgaacct
     1681 gtagcgttca tcagagaatt tagctttcaa ccagattgtt cactgtactc tacatggaag
     1741 atctcacaca ggtcaaagag ctcttaggaa tgtaagggat ggggagaaat cttcagtaaa
     1801 tgttcctaaa ccacccatca ttggtgagtt cttgatgcag tcatctcagg catccctccc
     1861 tgtcctcagg tcctgtgcat atacctgcta agtatttcca tttaggtttg gccccttagc
     1921 ctcctgatcc aaaacacaat tgttttgctt ggactttttc aaatgtctgt aatccatctt
     1981 gtttccttca agtttattac tcatttattt tacagtcaga aaatttcttt ttaaaaatat
     2041 acatgttatt tatgtaactc ttctaatact cattgtaaaa tgtttattta atgcacataa
     2101 aatgtttagc cacatgattg actgtattaa gtttggatgg agaacatccc ttcaatgatt
     2161 aggagacaca tcagcacaga acacagagag gccacacaca gaggcaaagg aacatgaggg
     2221 ggtatccctg agccaatgct ttattgggcc cagggttaca gatttccttt gttgagtcgc
     2281 aacaagcagg catgagttct gggaggtcat ctcaggtgta gaaagtgatc attgcgacat
     2341 atgtgcccag tccatcttca gcagtgcatt taaagggagc agtgaaggca ggcagccccc
     2401 tttgacgggt tcttgttctt ggcaccagct tgagccactt gtggatggtg tgatactagg
     2461 aagtgtcaaa ggtgactgac ctacacctcc agcctgggaa agttaaaact tcaatgaaat
     2521 agataccaag agaacataaa atgaaaggac ttcaatacac tgacccatag gggtgcttag
     2581 aaaatgtgtt agaccagaaa aattatttct aaaccatggc ctctcaaatt tggaacttag
     2641 gtgatgacaa caatttagaa actgaaagtg tcttcaggtg gaacaattag tatgtgtagt
     2701 gtatttaaga tggaagcttt ctaatgatcc taaaggttat gttttcttat tggtaaagaa
     2761 attaaatctg gtctggtacg tagaatctgt tttaggaagt gcctagaagt taaagactgg
     2821 aacaaagaat tagaatttat ttgggaaaaa atacacatgt gtatatatag tctaggtcac
     2881 aaaagaaaca ttcttatatt tactaacaag cccccagcag gccagtctag ccgaaacagg
     2941 gagccccagg cttaccatga gatcctatct caaaatgtaa ggtggagggc gacagactcc
     3001 caacaccgac taatggtctc cacacacacg cacatgggca atcaagccta caaatgcata
     3061 tatacaaata aataaataaa agtaaaattt gaaagggtga ttgtggctgt gtttggaggc
     3121 acacacatct catttcagca ctctggaggt agagacagat gggtctctga gttagagatc
     3181 agccaggttt acagagttct agggcagtca gggctacata gcgaggcctt ggataaaaac
     3241 aaactgaaag atcacatgca agatgagtac acactgcaga aataggaaaa caggggacac
     3301 aaacttccat tctcgttgtt ccagaggact ctgggtggtt tttgtaaagt ccatctcatg
     3361 gtaggttctg ttggactgta tgcctgcctt tccttgttta tcctaagttc attctcttcc
     3421 tctacccccc acccaatttg ttatcaaatt gccagggctg gcgagatggc tcagtggtta
     3481 agagcgcttg ctggttttgc agaggacttg gatttgggtc ccagcaccca tatagcagct
     3541 cacaactgtc tgtaacccaa cttccagggg atgctctttt ctgggctcca caagaactgt
     3601 aggcacgcaa tgcacacaat acatgaagac aaaacactca tccacataaa ataaaagcaa
     3661 gtctttcagg ggctggagag atggctcaga tgttaagagc agtctgctct tcccaaaatc
     3721 ctgagttcaa ttcccagcaa ccatatggtg gctcacaacc atttatcctg ggatctgatg
     3781 ccctcttctg gaaagcggat gtacatacag atagagcatc atttacataa aataataaac
     3841 caacctttca aaaaatcttt gtggtgacaa tgctgcaata ttgtttttgc ttaagaattt
     3901 tttagtataa aatttccttc tggttatatg aggtgtttgt gaagcataaa tggttttata
     3961 tttagatgtt ggtttctttt ctaaaatatt tcattacggt atgcacatat ttaccactca
     4021 gaaaaaaaaa taacactttt gttctcaaac attttatata aagaatattc tgcttgctca
     4081 gcggtagtga cacacacttt taaaaccagc ccttccagag gcagaggcag gcagatctcc
     4141 gagttcgagg ccagcctggt ctacagagtg agttccagaa catccagagc cacacaacac
     4201 tctctcagat gataactgaa tgacaaaaat aggcagctca cagtcctaaa tgggacattc
     4261 ttgtatacct tctcaagggt ctgggaacat cgtattagac gaaggagaaa gaatgtaaga
     4321 gtctgagaat ggcaaggagt gctgtggaat ggttttgggc atgttgtgct catgaactca
     4381 tagaaactga ttaccagcac aagattgctg gtaattacca gcgccgatca atattatagc
     4441 cattgataga ggaagggcgt acccctccac acctagctga ggagctataa gcaaatgatg
     4501 gcagctgaga gagtgggagt catttttctt tggggatgtg gcctctggta gattgttcat
     4561 gtcacactcc actggtatac tggtaggcgg cactaacagg gctatattta aaaaaaaagt
     4621 gtggtggggt ggcaaaagga atgtggaagt attggggatg gttgggagag gagatgtgtt
     4681 ggatatgatc aagatacagt atatatacat gtatgaaacc gacaaagaat aaactgcgct
     4741 cccctcacct c
//
