LOCUS       NM_001401859            4806 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus zinc finger protein 729b (Zfp729b), transcript variant
            2, mRNA.
ACCESSION   NM_001401859
VERSION     NM_001401859.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4806)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT573016.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR17253012.1963392.1,
                                           SRR17253011.10043508.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849383 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-106               CT573016.5         9862-9967
            107-233             CT573016.5         22735-22861
            234-329             CT573016.5         24199-24294
            330-4806            CT573016.5         25595-30071
FEATURES             Location/Qualifiers
     source          1..4806
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 34.59 cM"
     gene            1..4806
                     /gene="Zfp729b"
                     /note="zinc finger protein 729b"
                     /db_xref="GeneID:100416706"
                     /db_xref="MGI:MGI:2145180"
     exon            1..106
                     /gene="Zfp729b"
                     /inference="alignment:Splign:2.1.0"
     CDS             71..3238
                     /gene="Zfp729b"
                     /note="isoform 2 is encoded by transcript variant 2; Novel
                     C2H2 type zinc finger protein (AA987161)"
                     /codon_start=1
                     /product="zinc finger protein isoform 2"
                     /protein_id="NP_001388788.1"
                     /db_xref="GeneID:100416706"
                     /db_xref="MGI:MGI:2145180"
                     /translation="MEVSAGSSAIFQEMLSFKDVAIDFSAEERECLDPAQWKLYRNVM
                     LENYDNLVFLGLTSSKPYLVTCLEQIQEPSDVKRGAATSMLPECREYGKVFEWSKVFQ
                     NHQIIDLEVKPYRSEERAKSFHIPSLSSEESTIHAGEKPYKCEVCGKAFCIPLLLSKH
                     KIIHKGENLYKCEVCGKAFQHPSRLSRHKKIHSEEKPYKCEVCGKAFHFPSLLLVHKR
                     VHTGEKPYKCEVCGKAFHYPSILSKHKRIHTGEKPYKCEECGKAFHISSFLSKHKIIH
                     RGEKPYKCEVCGKAFHYPSRLSNHKKIHSVEKPYKCEICGKAFRILSLLSKHKIIHTE
                     ENPYKCEVCGKAFDYPSRLSTHAKMHTGEKPYKCEVCEKAFRSLSSLSKHRRIHMGDN
                     YYNSELCSNAFVYPSRLSKHKKICRGEKPYKCEVCGKAFHVSSLLSKHRTIHTGEKLY
                     KCEVCGKAFYYPSRLSTHKRIHTGEKPYKCEVCGKAFCFPPSLSKHKRIHTGEKPYKC
                     KECGKAFRFPSSLSAHKKIHTGEKPYKCEVCGKAFHYPSLLSKHKIIHTGEKPYKCDI
                     CDQAFHVPSKLSHHKIIHTGEKPYKCEVCGKAFHYSSLLSKHKIIHTGKKPYKCEVCD
                     KAFHYPSRLFSHTKMHTGEKPYKCEVCGKAFCSPSSLSKHKRIHKVEKAYSCEICGKT
                     FCIPLLLSKHKIIHTGENHYNSEVCSKFFVYPSRLPKHKKIYKREKPYNCDVCGKAFD
                     YPSRLSKHKKIHTREKPYKCDVCGKAFHIASLLLVHKGIHTGEKPYKCEDCGKAFYYP
                     SFLSKHKRIHTGEKPYQCEVCGKAFHVSSSLSKHRIIHTGERPYKCEVCGKAFRFSSS
                     LSKHKRIHTGKKPYKCEECGKAFHFPSLLSKHKISHTREKFYNCDLCSKTFHYPSLLS
                     KHKMIHMEGKPHKCDVCGKAFHYPSKLSNHKKIHTGEKPYKCEVCGNVFRFPSSLSEH
                     KKTHTGENPYKCEVCGKAFCSASLLSKHKIIHIGKKPYKCEVCGKAFHYPSRLSKHKA
                     IHGAGEMSRVEGTGCPSRGPEFNSQ"
     exon            107..233
                     /gene="Zfp729b"
                     /inference="alignment:Splign:2.1.0"
     exon            234..329
                     /gene="Zfp729b"
                     /inference="alignment:Splign:2.1.0"
     exon            330..4806
                     /gene="Zfp729b"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4781..4786
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp729b"
                     /note="hexamer: AATAAA"
     polyA_site      4806
                     /gene="Zfp729b"
                     /note="major polyA site"
ORIGIN      
        1 cttattcttc aaacttcact cctcaaatgt gtgcagttgt cctcctcagc gctgcatctg
       61 gatttctgac atggaggtta gtgcagggag cagcgccatc tttcaggaaa tgctgtcatt
      121 caaggatgtg gccattgatt tctctgcaga ggagagggaa tgccttgatc ctgctcagtg
      181 gaaactgtac aggaatgtga tgttggagaa ttatgacaat cttgtgttcc tgggtcttac
      241 ttcgtctaag ccatatctgg tcacatgtct ggagcaaata caagagcctt cagatgtgaa
      301 aagaggagca gctacctcta tgctcccaga atgcagagaa tatggaaaag tttttgagtg
      361 gtccaaagtg tttcaaaatc accagataat tgacttagaa gtgaagccct acaggagtga
      421 agaacgtgcc aagtccttcc atattccatc attaagttct gaagagagca caattcatgc
      481 aggagaaaaa ccttacaaat gtgaagtttg tggcaaggcc ttctgcattc cattattact
      541 ttctaaacac aagataattc ataaaggaga gaatctctac aagtgtgaag tgtgtggcaa
      601 ggccttccaa catccatcaa gactttccag acataagaag attcattcag aagagaaacc
      661 atacaagtgt gaagtatgtg gaaaagcctt ccactttcca tcattacttt tggtacacaa
      721 gagagttcat acaggagaaa aaccatacaa gtgtgaagta tgtggcaagg cctttcatta
      781 tccatcaata ctctctaaac acaagcgaat tcatacagga gagaaaccat acaagtgtga
      841 agaatgtggc aaggccttcc acatttcatc atttctttct aaacacaaaa taattcatag
      901 aggagaaaaa ccctacaagt gtgaggtatg tggcaaggcc ttccattatc catcaagact
      961 ttccaaccat aagaaaatcc attcagtaga gaaaccatac aagtgtgaaa tatgtgggaa
     1021 ggccttccgc attttatcac tcctttctaa gcacaagata attcatacag aagagaatcc
     1081 ttacaagtgt gaagtatgtg gcaaggcttt cgattatccc tcaagacttt ctacccatgc
     1141 aaaaatgcat acaggagaga aaccatacaa gtgtgaagta tgtgaaaagg ctttccgttc
     1201 tctgtcatca ctttctaaac acaggagaat tcatatggga gataattatt ataacagtga
     1261 attatgtagc aatgccttcg tttatccttc aagactttct aaacataaga aaatttgtag
     1321 aggagagaag ccctacaaat gtgaagtatg tggcaaggcc ttccatgttt catcactgct
     1381 ttctaaacac aggacaattc atacaggaga aaaactctat aagtgtgaag tatgtgggaa
     1441 ggccttctat tatccatcaa gactttccac gcataagaga attcatacag gagaaaagcc
     1501 atacaagtgt gaagtatgtg gaaaggcgtt ctgttttcca ccatcactat ctaaacacaa
     1561 gagaattcac acaggagaga aaccatacaa gtgtaaagaa tgtgggaagg ccttccgatt
     1621 tccatcatca ctatctgcac acaagaaaat tcatacggga gaaaaaccct acaagtgtga
     1681 agtttgtggc aaggccttcc attatccatc attactttct aaacacaaga taattcatac
     1741 aggagaaaaa ccctataagt gtgacatatg tgaccaggca tttcatgttc catcaaaact
     1801 ttctcatcac aagataattc atacaggaga aaaaccctac aagtgtgaag tatgtggcaa
     1861 ggccttccat tattcatcac tactttctaa acacaagatt attcatacag gaaaaaaacc
     1921 ctacaagtgt gaagtgtgtg acaaggcctt ccattatcca tcaagacttt ttagccatac
     1981 aaaaatgcat actggagaga aaccatacaa gtgtgaagtg tgtggaaagg ccttctgttc
     2041 tccatcatca ctttctaaac acaagagaat tcataaagtt gaaaaagcct acagttgtga
     2101 gatttgtgga aaaaccttct gcattccatt attactttct aaacacaaga taattcatac
     2161 aggtgagaat cactataaca gtgaggtatg tagcaagttc tttgtttatc cttcaagact
     2221 tcctaaacat aagaaaattt ataaaagaga gaaaccatac aattgtgatg tatgtgggaa
     2281 ggccttcgat tatccatcaa gactttctaa acataagaaa attcatacaa gagagaaacc
     2341 gtacaagtgt gatgtatgtg gaaaggcctt ccacattgca tcattactat tagtacacaa
     2401 gggaattcat actggagaaa aaccctacaa gtgtgaagat tgtgggaagg ctttctatta
     2461 tccatcattt ctttctaaac acaagagaat tcatacagga gaaaaaccgt accagtgtga
     2521 agtgtgtggc aaggccttcc atgtttcatc atcactatct aaacacagga taattcatac
     2581 aggagagaga ccatacaagt gtgaagtgtg tgggaaggcc ttccgctttt catcatcact
     2641 atctaaacac aagagaattc atacaggaaa gaaaccctac aagtgtgaag aatgtggcaa
     2701 ggccttccat tttccatcat tgctttctaa acacaagata agtcatacta gagaaaaatt
     2761 ctacaattgt gacttatgta gcaagacctt ccattatcca tcattacttt ctaaacacaa
     2821 gatgattcat atggaaggaa aaccccacaa gtgtgatgta tgtggtaagg ccttccatta
     2881 tccttcaaaa ctttccaatc ataagaaaat tcacacagga gagaaaccct acaagtgtga
     2941 agtatgtgga aatgtcttcc gttttccatc gtcactttct gaacacaaga aaactcatac
     3001 tggagagaat ccatacaagt gtgaagtatg tggcaaggcc ttctgttctg catcattact
     3061 ttctaaacac aagataattc atataggaaa gaagccctac aaatgtgaag tgtgtggcaa
     3121 ggccttccat tatccgtcac gactttccaa gcataaggca attcatggtg ctggagagat
     3181 gtctagagtt gagggcactg gatgcccttc cagaggtcct gagtttaatt cccagtaact
     3241 acatggtggc tcacaaccat ccgatgccct cttctggtat gcagatgtac atgcagatag
     3301 agatgtcata tacataaaat aaacaaatct ttaaaaaata ttgatggtat attgcttggt
     3361 accaaaagaa aagaaaaaat gaaattcaca caggagagaa acagtagtag tctgaagtat
     3421 gtagacgggc ctcaaatttc atcatcactt ttggtacaga agaaaattca tacaggagaa
     3481 aatccctaca agtgtgtagt gtgtggcaag gatttccatt gtccaacatt actttctaaa
     3541 tacaggagaa gtcactcagg aaaacaaaaa aacaaaccta caagtataaa gtatgtatcc
     3601 tggccttctg tgctcaacaa aaacattagg gatcatgaaa gaatccattc tgcagataaa
     3661 ccatacaact ctaaagaatg tagcaaatac ttcagaagtt ccatagcata tgctgagcac
     3721 aggataattc ctactgtaca gaaatattac aattgtggag aatgtggcaa aaactattac
     3781 ttgtcttctg gtcttaagca acattcagga attcatctgt tagagaaacc acacaagtgt
     3841 gaagaatgtt ccaaggtctt ttgtacttac taagaactgt aaaacacctc agttcataca
     3901 agactgaaat gcctcatgtg aaaaatgttg caaacccttt aatagacttt cttgtatgtc
     3961 tcaacacaag gtactccaag ctggagtgaa atagtacaaa tgttaaaaat attcacagta
     4021 cattaacact tcttcagaca ctaagttatc gaaagctttc tgctgaatgg aaactatgta
     4081 agattgagaa atgtggtaaa taaagccttt ggaatcattc acacaaccat gtcaaaaata
     4141 caaatgtcag actgtttatt ctctggattt gaggctgatc tttccttgct gtcttttgtt
     4201 tcttctgttt gagaatcaga acacttctat accattgttg caaaagtagt cacttgtttt
     4261 tatgttgtaa tagatcacac ataagagatt gccttgagtc tcacataaca catggactgt
     4321 ggtctcataa tgttgtaatt attaaatact atatggacct ttcaagttgt aggctatttt
     4381 acttaggagg tgaaagtaag gttggggaaa agggaagaaa tgttgtgatt aaagctctgt
     4441 ggctaaggct agcatgagtt tgggaacaaa cttaaaagac aagacccata cccatgttag
     4501 tattccaagt acccacaaaa taggtaatta cctctgcaga tttttctctg acctccatgt
     4561 gtgggctccc acatatacat acatacatac acccagacaa aataaaccta aattatgttt
     4621 tggaattatg cttgtgtttt atgcagacag gggtcaagaa ttaatgctta tatcttaatt
     4681 ctcagctact acttgagtat catatctgtc tccattccac catgttccct aagcatgctt
     4741 tctaaaataa tgataatgta caaaactgta aacaagctcc aataaatgct ttgtttataa
     4801 gagtta
//
