LOCUS       NM_001381899            4117 bp    mRNA    linear   ROD 01-MAY-2024
DEFINITION  Mus musculus zinc finger protein 711 (Zfp711), transcript variant
            3, mRNA.
ACCESSION   NM_001381899 XM_017318495
VERSION     NM_001381899.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4117)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 4117)
  AUTHORS   Farini,D., Cesari,E., Weatheritt,R.J., La Sala,G., Naro,C.,
            Pagliarini,V., Bonvissuto,D., Medici,V., Guerra,M., Di Pietro,C.,
            Rizzo,F.R., Musella,A., Carola,V., Centonze,D., Blencowe,B.J.,
            Marazziti,D. and Sette,C.
  TITLE     A Dynamic Splicing Program Ensures Proper Synaptic Connections in
            the Developing Cerebellum
  JOURNAL   Cell Rep 31 (9), 107703 (2020)
   PUBMED   32492419
REFERENCE   3  (bases 1 to 4117)
  AUTHORS   Kasowitz,S.D., Ma,J., Anderson,S.J., Leu,N.A., Xu,Y., Gregory,B.D.,
            Schultz,R.M. and Wang,P.J.
  TITLE     Nuclear m6A reader YTHDC1 regulates alternative polyadenylation and
            splicing during mouse oocyte development
  JOURNAL   PLoS Genet 14 (5), e1007412 (2018)
   PUBMED   29799838
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 4117)
  AUTHORS   Church,D.M., Goodstadt,L., Hillier,L.W., Zody,M.C., Goldstein,S.,
            She,X., Bult,C.J., Agarwala,R., Cherry,J.L., DiCuccio,M.,
            Hlavina,W., Kapustin,Y., Meric,P., Maglott,D., Birtle,Z.,
            Marques,A.C., Graves,T., Zhou,S., Teague,B., Potamousis,K.,
            Churas,C., Place,M., Herschleb,J., Runnheim,R., Forrest,D.,
            Amos-Landgraf,J., Schwartz,D.C., Cheng,Z., Lindblad-Toh,K.,
            Eichler,E.E. and Ponting,C.P.
  CONSRTM   Mouse Genome Sequencing Consortium
  TITLE     Lineage-specific biology revealed by a finished genome assembly of
            the mouse
  JOURNAL   PLoS Biol 7 (5), e1000112 (2009)
   PUBMED   19468303
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL831771.5.
            
            On Apr 20, 2020 this sequence version replaced XM_017318495.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7652917.249205.1,
                                           SRR9219380.48654.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-176               AL831771.5         68434-68609
            177-294             AL831771.5         70369-70486
            295-399             AL831771.5         71972-72076
            400-942             AL831771.5         82597-83139
            943-1098            AL831771.5         91656-91811
            1099-1236           AL831771.5         92443-92580
            1237-1281           AL831771.5         95808-95852
            1282-1425           AL831771.5         99530-99673
            1426-4117           AL831771.5         100083-102774
FEATURES             Location/Qualifiers
     source          1..4117
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 48.76 cM"
     gene            1..4117
                     /gene="Zfp711"
                     /gene_synonym="2810409C01Rik; A230078I01Rik; Znf711"
                     /note="zinc finger protein 711"
                     /db_xref="GeneID:245595"
                     /db_xref="MGI:MGI:3045342"
     exon            1..176
                     /gene="Zfp711"
                     /gene_synonym="2810409C01Rik; A230078I01Rik; Znf711"
                     /inference="alignment:Splign:2.1.0"
     exon            177..294
                     /gene="Zfp711"
                     /gene_synonym="2810409C01Rik; A230078I01Rik; Znf711"
                     /inference="alignment:Splign:2.1.0"
     exon            295..399
                     /gene="Zfp711"
                     /gene_synonym="2810409C01Rik; A230078I01Rik; Znf711"
                     /inference="alignment:Splign:2.1.0"
     CDS             321..2603
                     /gene="Zfp711"
                     /gene_synonym="2810409C01Rik; A230078I01Rik; Znf711"
                     /note="isoform 2 is encoded by transcript variant 3"
                     /codon_start=1
                     /product="zinc finger protein 711 isoform 2"
                     /protein_id="NP_001368828.1"
                     /db_xref="GeneID:245595"
                     /db_xref="MGI:MGI:3045342"
                     /translation="MESGGGSLGLHTSDARMAHTMIMQDFVAGMAGTAHIDGDHIVVS
                     VPEAVLVSDVVTDDGITLDHGLAAEVVHGPDIITETDVVTEGVIVPEAVLEADVAIEE
                     DLEEDDGDHILTSELITETVRVPEQVFVADLVSGPDGHLEHVVQDCVSGVDSPTMVSE
                     EVLVTNSDTETVIQAGGGVPGSTVTIKTEEDDDDDVKSTSEDYLMISLDDVGEKLEHM
                     GNTPLKIASDGSQEDVKEDAFGSEVIKVYIFKAEAEDDVEIGGTEIVTESEYSSGHSV
                     AGVLDQSRMQREKMVYMAVKDSSQEQDDINERRVSRRYEECQAPGNTFDSALENRNTT
                     AAQYLQICDSMNTNKVLKQKIKKRRRGETRQWQTAVIIGPDGQPLTVYPCHICTKKFK
                     SRGFLKRHMKNHPDHLMRKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEY
                     TRRYREASPLSSNKLILRDKEPKMHKCKYCDYETAEQGLLNRHLLAVHSKSFPHVCVE
                     CGKGFRHPSELKKHMRTHTGEKPYQCQYCAFRCADQSNLKTHIKSKHGSNLPYKCEHC
                     PQAFGDERELQRHLDLFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCD
                     KGFHRPSELKKHSDIHKGRKIHQCRHCDFKTSDPFILSGHILSVHTKDQSLKCKRCKR
                     GFRQQNELKKHMKTHTGRKIYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEFCKKG
                     FRRPSEKKQHIMRHHKETLM"
     exon            400..942
                     /gene="Zfp711"
                     /gene_synonym="2810409C01Rik; A230078I01Rik; Znf711"
                     /inference="alignment:Splign:2.1.0"
     exon            943..1098
                     /gene="Zfp711"
                     /gene_synonym="2810409C01Rik; A230078I01Rik; Znf711"
                     /inference="alignment:Splign:2.1.0"
     exon            1099..1236
                     /gene="Zfp711"
                     /gene_synonym="2810409C01Rik; A230078I01Rik; Znf711"
                     /inference="alignment:Splign:2.1.0"
     exon            1237..1281
                     /gene="Zfp711"
                     /gene_synonym="2810409C01Rik; A230078I01Rik; Znf711"
                     /inference="alignment:Splign:2.1.0"
     exon            1282..1425
                     /gene="Zfp711"
                     /gene_synonym="2810409C01Rik; A230078I01Rik; Znf711"
                     /inference="alignment:Splign:2.1.0"
     exon            1426..4117
                     /gene="Zfp711"
                     /gene_synonym="2810409C01Rik; A230078I01Rik; Znf711"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4091..4096
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp711"
                     /gene_synonym="2810409C01Rik; A230078I01Rik; Znf711"
                     /note="hexamer: AATAAA"
     polyA_site      4117
                     /gene="Zfp711"
                     /gene_synonym="2810409C01Rik; A230078I01Rik; Znf711"
                     /note="major polyA site"
ORIGIN      
        1 gcagacgcag agtagctcgt gattggctcg ggctgcggaa cctcggaatc ccgaacgaac
       61 gccaggacct tccaggtcca cggctgccgc cccccgcggc agttgagagc gcggcctccg
      121 actgcctggc ggcggggaag gcggtggcgg ttgcagcccc gcggaggcgg tgacaggtaa
      181 agaccgtttt cccaaagaaa atgaattgtt ttgaaggaaa aaaataagaa attttgcaaa
      241 aattacttta taatccttaa gaaaatcttc atttcttcaa tctacttgta aaagatacat
      301 gtgaatgagc tttgctaagg atggagtcag gtggtggaag tcttggattg cacacttcag
      361 atgctagaat ggctcatacc atgattatgc aggattttgt ggctggaatg gctggtactg
      421 cacatatcga tggagaccat attgtagttt cagttcctga agctgtatta gtttctgatg
      481 ttgtcacaga tgatgggata actctcgatc atggccttgc agctgaagtt gtccatgggc
      541 ctgatattat tacagagact gatgtggtaa cagaaggggt gattgttcct gaagctgtgc
      601 ttgaagccga tgttgccatt gaagaagatt tggaagaaga tgatggagat catatcttaa
      661 cttctgagct tattacagaa accgttaggg tacctgagca ggtttttgtg gctgatcttg
      721 tttctggtcc tgatggacat ttggaacatg tggtccaaga ttgtgtttca ggtgtggact
      781 ctcccacaat ggtgtcagaa gaagttcttg taactaattc agatacagaa actgtgattc
      841 aagcaggtgg tggtgttcct ggttctactg ttaccataaa aacggaagaa gatgatgatg
      901 atgatgtcaa gagcacttcc gaagactact taatgatatc tttggatgat gtgggagaga
      961 agttagagca tatggggaac acgccattga aaatcgctag cgatggttca caagaagatg
     1021 ttaaagaaga tgcatttggt tcagaagtga taaaagtata tatctttaaa gcagaggctg
     1081 aagatgatgt tgaaataggt gggacagaaa ttgtcacaga gagtgaatac agcagtggcc
     1141 attctgtagc tggagtgctt gaccagagcc gaatgcagcg agagaaaatg gtttacatgg
     1201 cagtgaaaga ttcttcccag gaacaggatg atatcaatga gagacgagtt tctcgaaggt
     1261 atgaagaatg tcaagcacca ggaaacactt ttgactcagc attagaaaac agaaacacta
     1321 cagcagcaca gtaccttcaa atttgtgata gcatgaacac aaataaagtt cttaaacaaa
     1381 aaatcaagaa gaggagaagg ggagaaacaa ggcagtggca aacagctgtt ataataggtc
     1441 ctgatggaca gcccttgaca gtataccctt gccatatttg cacaaaaaag tttaaatcca
     1501 ggggattctt aaaaagacac atgaagaatc atcccgatca tttgatgaga aagaagtacc
     1561 agtgtacaga ttgtgatttc acaactaaca agaaagtgag tttccataac cacttagaaa
     1621 gccataagct cataaacaag gttgataaaa cccatgaatt tacagaatac actcgaagat
     1681 acagagaagc tagtccactg agttcaaata aactcatttt aagagacaag gaaccgaaga
     1741 tgcacaagtg caagtactgt gattacgaaa ctgccgaaca aggactgtta aatagacatt
     1801 tgctggctgt tcatagcaag agttttcctc atgtttgtgt tgagtgtggg aagggttttc
     1861 gtcatccttc tgaactcaag aaacatatga gaacccatac tggtgagaag ccatatcagt
     1921 gtcagtactg tgcattcaga tgtgcagatc aatcaaacct gaaaacgcac attaagtcta
     1981 agcatggtag caacttgccc tataaatgtg agcattgtcc tcaagccttt ggtgatgaga
     2041 gagagcttca gcgccatctg gatttgtttc aaggacataa aacacaccaa tgtcctcatt
     2101 gtgatcataa gagcaccaac tcaagtgacc ttaagcggca catcatatct gtccatacca
     2161 aggactttcc tcacaaatgt gaagtctgtg ataaaggttt tcatcgtcct tcagagctta
     2221 aaaaacatag tgatattcat aagggtagga agattcacca gtgtaggcat tgtgacttta
     2281 aaacctcaga tccatttatt cttagtggtc atatcctttc agttcatact aaagatcagt
     2341 cattgaagtg taaaaggtgc aagagaggat tcagacaaca gaatgagctg aaaaagcaca
     2401 tgaagactca tactggaagg aagatttacc aatgtgaata ttgtgaatac agcaccacag
     2461 atgcatctgg attcaaacga catgtgattt caatacatac gaaagactat ccacacaggt
     2521 gtgaattctg caaaaaggga ttccgaagac catcagaaaa aaagcagcat ataatgaggc
     2581 accacaagga gactcttatg tagtaagatc gaaataagga aagatgtcat ttacaaaata
     2641 aaatatacta tttgggagga aaatctcact gtttgatctg gtttcaaagc ttgatattaa
     2701 atcataaatt tacattcttt gtattaaaga tcttgaaata tttggactag aaaggcagtc
     2761 tcatagccct ttgaaaatta tctaaagaat ttaaggagta ccataggacg gttgcagagg
     2821 aacttaactg tcattaacag tattatatgc ataactaaac tacagagggg gaaagttaag
     2881 acaccttatt tgattggtta cactagagat aagtgtttct ggaaggagaa tacataattg
     2941 atttagaaat gctttgctgt agcaagcagc ctcactttta tgcaatttta gaaatagggt
     3001 ggggaaagaa aatgcagtca tccatcagtc acttagtcat tgaacctttt atattgtacc
     3061 tggacattgg attccagaaa cagcaaatgt tttgtgtatt tgttacaagg aatctcactc
     3121 tggtaaaaca agttacattg attcagtcct agttttaaaa aggcagaact tcagagttgt
     3181 tgatatttta tcacaggaca tgaagtttaa gacatagcat tctgtgctga aacctgaagg
     3241 gaaatataag aaataaagag ttccagtttt gatgttcaag tagattcagt atggcatata
     3301 tgataaaagt gtttgagtca aatgtggctt tctaaaatgg atgcaagtat gttaaaaagt
     3361 caacactatg tttcttataa tctgaatgtt aaattgagag aacagttttc ttaaatatga
     3421 aaatatttag aatttttagg gcatttttag taagtatgac tcttcaagtc ttacttgctc
     3481 taatgtttaa aggtgcaatt ttatgccatt attgaaaatt ttgattttta aaatctatat
     3541 accatattct taacataaat tttcaatgag gtggtattta tgcagtattt aacagaacaa
     3601 tatgctgcca atagagtttg gaggtgggta ttcagtttac agtgtataaa tttaaaatat
     3661 gcatccctta acaacgcttt gtgttagcat gctgcaaatc aaaatggcgc ttaatattaa
     3721 aacctggtgt agggaatttt aatgaaaatc ctgttcataa atgtaatgca tatgatgtgt
     3781 acttttaagt tctagtcccc aaatttagtt tatattcagc tgttcagcat aactaatgtg
     3841 taattttcct tcacgctata ttgtggcttt gtgttttaag taatattctc ctttctgttt
     3901 ttgcaccaga taagaatctg ttacttgaaa acaaattttt ttatctttct taacttcaga
     3961 atactaaatt tggaaaatct actaaacttg tgtgttatgt ggctgtaaat gatgtacacg
     4021 ctgtaaaata agattgttac tgttacgtgg acttattatt tctaaatgtt actcattgaa
     4081 atgagcatac aataaaaagc atttattgca cttcaaa
//
