LOCUS       NM_026999               1033 bp    mRNA    linear   ROD 17-DEC-2024
DEFINITION  Mus musculus zinc finger protein 688 (Zfp688), mRNA.
ACCESSION   NM_026999 XM_355943
VERSION     NM_026999.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1033)
  AUTHORS   Biase,F.H., Cao,X. and Zhong,S.
  TITLE     Cell fate inclination within 2-cell and 4-cell mouse embryos
            revealed by single-cell RNA sequencing
  JOURNAL   Genome Res 24 (11), 1787-1796 (2014)
   PUBMED   25096407
REFERENCE   2  (bases 1 to 1033)
  AUTHORS   Tamplin,O.J., Cox,B.J. and Rossant,J.
  TITLE     Integrated microarray and ChIP analysis identifies multiple Foxa2
            dependent target genes in the notochord
  JOURNAL   Dev Biol 360 (2), 415-425 (2011)
   PUBMED   22008794
REFERENCE   3  (bases 1 to 1033)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   4  (bases 1 to 1033)
  AUTHORS   McClintock,T.S., Glasser,C.E., Bose,S.C. and Bergman,D.A.
  TITLE     Tissue expression patterns identify mouse cilia genes
  JOURNAL   Physiol Genomics 32 (2), 198-206 (2008)
   PUBMED   17971504
  REMARK    GeneRIF: Zfp688 is most abundantly expressed in tissues rich in
            highly ciliated cells, such as olfactory sensory neurons, and is
            predicted to be important to cilia.
REFERENCE   5  (bases 1 to 1033)
  AUTHORS   Evsikov,A.V., Graber,J.H., Brockman,J.M., Hampl,A., Holbrook,A.E.,
            Singh,P., Eppig,J.J., Solter,D. and Knowles,B.B.
  TITLE     Cracking the egg: molecular dynamics and evolutionary aspects of
            the transition from the fully grown oocyte to embryo
  JOURNAL   Genes Dev 20 (19), 2713-2727 (2006)
   PUBMED   17015433
REFERENCE   6  (bases 1 to 1033)
  AUTHORS   Blackshaw,S., Harpavat,S., Trimarchi,J., Cai,L., Huang,H.,
            Kuo,W.P., Weber,G., Lee,K., Fraioli,R.E., Cho,S.H., Yung,R.,
            Asch,E., Ohno-Machado,L., Wong,W.H. and Cepko,C.L.
  TITLE     Genomic analysis of mouse retinal development
  JOURNAL   PLoS Biol 2 (9), E247 (2004)
   PUBMED   15226823
REFERENCE   7  (bases 1 to 1033)
  AUTHORS   VanBuren,V., Piao,Y., Dudekula,D.B., Qian,Y., Carter,M.G.,
            Martin,P.R., Stagg,C.A., Bassey,U.C., Aiba,K., Hamatani,T.,
            Kargul,G.J., Luo,A.G., Kelso,J., Hide,W. and Ko,M.S.
  TITLE     Assembly, verification, and initial annotation of the NIA mouse
            7.4K cDNA clone set
  JOURNAL   Genome Res 12 (12), 1999-2003 (2002)
   PUBMED   12466305
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            DV654233.1, BQ550868.1, BC038680.1 and AI447502.1.
            
            On Sep 3, 2010 this sequence version replaced NM_026999.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DV654233.1, BQ550868.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-149               DV654233.1         1-149
            150-639             BQ550868.1         59-548
            640-1006            BC038680.1         211-577
            1007-1033           AI447502.1         1-27                c
FEATURES             Location/Qualifiers
     source          1..1033
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 69.51 cM"
     gene            1..1033
                     /gene="Zfp688"
                     /gene_synonym="2810407K09Rik"
                     /note="zinc finger protein 688"
                     /db_xref="GeneID:69234"
                     /db_xref="MGI:MGI:1916484"
     exon            1..226
                     /gene="Zfp688"
                     /gene_synonym="2810407K09Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             31..855
                     /gene="Zfp688"
                     /gene_synonym="2810407K09Rik"
                     /codon_start=1
                     /product="zinc finger protein 688"
                     /protein_id="NP_081275.3"
                     /db_xref="CCDS:CCDS21866.2"
                     /db_xref="GeneID:69234"
                     /db_xref="MGI:MGI:1916484"
                     /translation="MAPPPASLLVPMPGEIWPGFRKPELVSFADVAVYFSPQEWGCLR
                     PAQRTLYREVMRETYGLLGALGFPGPKPALISWMEQGSEAWSPAAQDPEEGESLGGAP
                     RGDIPNETEWGCKEGGERPAEAPAQLQPKEVVEHKTYSMATKSSAGAQPPTKAAPDQI
                     AGVQLPVQVPNTDIQASQRRHVCVDCGRRFTYPSLLVSHRRMHSGERPFPCPECGVRF
                     KRKFAVKAHQWIHRSCSGGRRGRRPGIRAVPGAPVRGDRDPPVLFRHYPDIFEECG"
     exon            227..340
                     /gene="Zfp688"
                     /gene_synonym="2810407K09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            341..1016
                     /gene="Zfp688"
                     /gene_synonym="2810407K09Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      994..999
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp688"
                     /gene_synonym="2810407K09Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      1015
                     /gene="Zfp688"
                     /gene_synonym="2810407K09Rik"
                     /note="major polyA site"
ORIGIN      
        1 agccaagccg ctgcctgggc aggatccccg atggcgccac ccccggcctc actgctggtt
       61 ccgatgcctg gggagatctg gcccggtttc aggaagcctg agcttgtgag cttcgcggac
      121 gtggccgtgt acttctcccc gcaggagtgg gggtgtctgc ggcccgcgca gagaaccctg
      181 tatcgggagg tgatgcgcga gacctacggc ctcctgggcg cgctcgggtt cccgggcccc
      241 aaaccagccc tcatctcttg gatggaacag gggagtgagg cttggagccc cgccgcccag
      301 gatcctgagg agggggaaag cctgggagga gctccgagag gagacattcc aaatgagaca
      361 gagtggggct gcaaggaagg aggagagaga ccggcagagg ctcctgctca gttgcaacct
      421 aaagaggtgg ttgaacataa gacttattcc atggctacca agtcctctgc aggggcacag
      481 ccacctacca aagctgcccc agaccagata gcaggtgtgc agcttcctgt ccaggtacca
      541 aacaccgata ttcaggccag ccagcgacgt catgtgtgtg tggactgtgg acgccggttt
      601 acctatccat ctttgctggt cagccaccgg cgcatgcact ctggtgagcg acccttcccc
      661 tgcccagagt gtggtgtacg cttcaagagg aagttcgcag tgaaagcaca ccaatggatc
      721 caccgttcct gctcaggggg tcgccgcggc cgaaggcctg ggatcagggc tgtgcctgga
      781 gccccagtcc gaggtgaccg ggatccacca gtgctctttc ggcactatcc agacattttt
      841 gaggagtgtg ggtgagttga atggccgcct ccgtctggag gtccggagcc tggagttgaa
      901 catgaacttg gcaactgaga caaatgagtc aagacttctt gaggatctct tgtaaacttg
      961 taaaaaaaaa tttgcctgta aagattcata cagattaaac ctgacacctc ccctccaaaa
     1021 aaaaaaaaaa aaa
//
