LOCUS       NM_001353989            5652 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus zinc finger protein 660 (Zfp660), transcript variant
            1, mRNA.
ACCESSION   NM_001353989
VERSION     NM_001353989.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5652)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5652)
  AUTHORS   Carninci P, Kasukawa T, Katayama S, Gough J, Frith MC, Maeda N,
            Oyama R, Ravasi T, Lenhard B, Wells C, Kodzius R, Shimokawa K,
            Bajic VB, Brenner SE, Batalov S, Forrest AR, Zavolan M, Davis MJ,
            Wilming LG, Aidinis V, Allen JE, Ambesi-Impiombato A, Apweiler R,
            Aturaliya RN, Bailey TL, Bansal M, Baxter L, Beisel KW, Bersano T,
            Bono H, Chalk AM, Chiu KP, Choudhary V, Christoffels A, Clutterbuck
            DR, Crowe ML, Dalla E, Dalrymple BP, de Bono B, Della Gatta G, di
            Bernardo D, Down T, Engstrom P, Fagiolini M, Faulkner G, Fletcher
            CF, Fukushima T, Furuno M, Futaki S, Gariboldi M, Georgii-Hemming
            P, Gingeras TR, Gojobori T, Green RE, Gustincich S, Harbers M,
            Hayashi Y, Hensch TK, Hirokawa N, Hill D, Huminiecki L, Iacono M,
            Ikeo K, Iwama A, Ishikawa T, Jakt M, Kanapin A, Katoh M, Kawasawa
            Y, Kelso J, Kitamura H, Kitano H, Kollias G, Krishnan SP, Kruger A,
            Kummerfeld SK, Kurochkin IV, Lareau LF, Lazarevic D, Lipovich L,
            Liu J, Liuni S, McWilliam S, Madan Babu M, Madera M, Marchionni L,
            Matsuda H, Matsuzawa S, Miki H, Mignone F, Miyake S, Morris K,
            Mottagui-Tabar S, Mulder N, Nakano N, Nakauchi H, Ng P, Nilsson R,
            Nishiguchi S, Nishikawa S, Nori F, Ohara O, Okazaki Y, Orlando V,
            Pang KC, Pavan WJ, Pavesi G, Pesole G, Petrovsky N, Piazza S, Reed
            J, Reid JF, Ring BZ, Ringwald M, Rost B, Ruan Y, Salzberg SL,
            Sandelin A, Schneider C, Schonbach C, Sekiguchi K, Semple CA, Seno
            S, Sessa L, Sheng Y, Shibata Y, Shimada H, Shimada K, Silva D,
            Sinclair B, Sperling S, Stupka E, Sugiura K, Sultana R, Takenaka Y,
            Taki K, Tammoja K, Tan SL, Tang S, Taylor MS, Tegner J, Teichmann
            SA, Ueda HR, van Nimwegen E, Verardo R, Wei CL, Yagi K, Yamanishi
            H, Zabarovsky E, Zhu S, Zimmer A, Hide W, Bult C, Grimmond SM,
            Teasdale RD, Liu ET, Brusic V, Quackenbush J, Wahlestedt C, Mattick
            JS, Hume DA, Kai C, Sasaki D, Tomaru Y, Fukuda S, Kanamori-Katayama
            M, Suzuki M, Aoki J, Arakawa T, Iida J, Imamura K, Itoh M, Kato T,
            Kawaji H, Kawagashira N, Kawashima T, Kojima M, Kondo S, Konno H,
            Nakano K, Ninomiya N, Nishio T, Okada M, Plessy C, Shibata K,
            Shiraki T, Suzuki S, Tagami M, Waki K, Watahiki A, Okamura-Oho Y,
            Suzuki H, Kawai J and Hayashizaki Y.
  CONSRTM   FANTOM Consortium; RIKEN Genome Exploration Research Group and
            Genome Science Group (Genome Network Project Core Group)
  TITLE     The transcriptional landscape of the mammalian genome
  JOURNAL   Science 309 (5740), 1559-1563 (2005)
   PUBMED   16141072
  REMARK    Erratum:[Science. 2006 Mar 24;311(5768):1713]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC125374.4.
            
            On Jun 18, 2019 this sequence version replaced NM_001353989.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR9219381.217284.1,
                                           SRR9219382.100226.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-88                AC125374.4         53772-53859         c
            89-187              AC125374.4         52858-52956         c
            188-5652            AC125374.4         42949-48413         c
FEATURES             Location/Qualifiers
     source          1..5652
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 73.22 cM"
     gene            1..5652
                     /gene="Zfp660"
                     /gene_synonym="EG623911; EG666257; Gm8008; Znf660 Gm8008"
                     /note="zinc finger protein 660"
                     /db_xref="GeneID:666257"
                     /db_xref="MGI:MGI:3645415"
     exon            1..88
                     /gene="Zfp660"
                     /gene_synonym="EG623911; EG666257; Gm8008; Znf660 Gm8008"
                     /inference="alignment:Splign:2.1.0"
     exon            89..187
                     /gene="Zfp660"
                     /gene_synonym="EG623911; EG666257; Gm8008; Znf660 Gm8008"
                     /inference="alignment:Splign:2.1.0"
     exon            188..5652
                     /gene="Zfp660"
                     /gene_synonym="EG623911; EG666257; Gm8008; Znf660 Gm8008"
                     /inference="alignment:Splign:2.1.0"
     CDS             485..1498
                     /gene="Zfp660"
                     /gene_synonym="EG623911; EG666257; Gm8008; Znf660 Gm8008"
                     /codon_start=1
                     /product="zinc finger protein 660"
                     /protein_id="NP_001340918.1"
                     /db_xref="GeneID:666257"
                     /db_xref="MGI:MGI:3645415"
                     /translation="MQRKTGKFKHKTFEDSKSPTEGSDPEHENSGPQFCASMTGKRGH
                     GERRQFVCTECGKAFSQSANLTVHERIHTGEKPYKCKECGKAFSHSSNLVVHRRIHTG
                     LKPYTCSDCGKAFSGKSHLSRHQEVHSGEKTHKCKECGKAFSRSSGLISHHRVHTGEK
                     PYTCIECGKAFSRSSNLTQHQRMHRGKKIYKCKECGKTCGSNTKIMDHQRIHTGEKPY
                     ECAECGKAFIFRKALNEHQRLHRREKPYKCNECGKAFTSNRNLIDHQRVHTGEKPYKC
                     NECGKTFRQTSQVILHLRTHTKEKPYKCSECGRAYRYSSQLIQHQRKHNEEKETLLFT
                     SQV"
ORIGIN      
        1 gttgcctaga agggcctcag gcgcaaggaa ggcatgcaag tctctgttgc cactcgccgg
       61 ctttgttcgg aggactgcgt gtggttcgcg actcaagatc ttccgcactg aatccaagga
      121 ggcgttcagg aaaagtgtgc tggacagatc cttaggagcg caacatttac tgtgtttgag
      181 aatgacgttc tctgcttttg aacactcacc cttctacgta aggctctgtg acctactcca
      241 tcttgtcttc ctaaaataat tctcacccta ttacaggaag gtggggcgta tacacgttct
      301 ctttcctgtc aggtggtgaa atagactgaa gggggtatta attctaagac atcattcctg
      361 aaaatcagaa tcatgtttta cccccaagag aattaattgc acataagtgt tgcagaggaa
      421 gtaaaagatt taaaaggaaa agagaagagg aaaagggtca ctgagatgcc cctggctgga
      481 gaggatgcag agaaagacag gaaagttcaa acataagaca tttgaagata gcaagtcgcc
      541 cactgaagga agtgacccag agcatgaaaa cagtggtcct cagttctgtg cctccatgac
      601 ggggaagaga ggtcatggtg aaaggagaca gtttgtgtgc actgagtgtg gaaaagcctt
      661 cagtcagagt gccaacctca ctgtgcatga gcgaatccac acaggagaga agccttataa
      721 gtgtaaggaa tgtggaaaag ccttcagtca cagctccaac cttgtggttc atcgaagaat
      781 ccacacggga cttaagccgt acacgtgcag tgattgtggg aaggcattca gtgggaagtc
      841 acatctcagc cggcaccagg aagtccacag tggggagaaa acgcacaaat gtaaagagtg
      901 tgggaaagcc ttcagccgga gctcaggact tatctctcat cacagagttc atactggcga
      961 gaagccctac acttgtattg agtgtgggaa agcctttagc aggagttcaa acctcactca
     1021 acatcagaga atgcacagag ggaaaaagat ttacaaatgt aaagagtgtg ggaaaacatg
     1081 tggttctaat acaaagatta tggaccatca gagaattcac actggggaga agccctacga
     1141 gtgtgccgag tgtgggaaag ccttcatctt caggaaggct cttaatgaac accagagact
     1201 ccaccgcaga gagaaacctt acaaatgtaa tgagtgtggg aaagccttta cttctaaccg
     1261 aaaccttata gatcatcaga gagttcacac tggagagaag ccttataaat gtaatgaatg
     1321 tggtaagaca ttcaggcaga catctcaggt tattctacat ttgagaactc atactaaaga
     1381 gaaaccctat aagtgtagtg agtgtgggag agcttatcgt tacagctccc agctcattca
     1441 gcatcaaagg aagcacaatg aagagaaaga aaccttactg tttaccagcc aggtgtgatg
     1501 gcacttgccg ttaatcccgg catttaggag acattagttt taggccagcc tggtctacat
     1561 agcgagttct agactagcca aggccacaaa gtgagaccct gtcttaggga aaaaaatggc
     1621 aataatgtta attactactt tttcgaaaat tagatttttt aataacatta aaattaattc
     1681 tgcttctaca aatccgtaca cagaaaatag taagtagcta aagtctaaca aaagggatat
     1741 tcatgccaac attatacata gctaaagggg aaaacaaaga aacaaacaaa ataccaaacc
     1801 aaacaaccaa acagagacca cccaaactgt agattattat atgagcagtg tgaaaggaat
     1861 gatagtctat tcatattatg cttctgaaac cattttgttt ttaaaagaat ttttaatgta
     1921 tgccatggga gaaatttctg gataacatgg aaagtggagg aatgaaatat ccagataaaa
     1981 tattttcacc taggaaaacg gagaaagaga agaaccaaac ctaaattttc accatagtta
     2041 tctcgaggtg ataggttgta gattatttct attttcttct gtatactttt ctaggctttc
     2101 tagattttct acaatgagag tgttactttt atatttacaa aaaagtataa tctattttaa
     2161 atacaagcac atgcttgttt ttaattcagt ggtaggaaaa gtacctattg tgtagtcttt
     2221 aaatcttggg attcacccta atcctggcac tggcagaagt ggaattatga gcgaatccat
     2281 ttcttttaga atccacttcc tgctactgaa gggggtggaa ctttagtgca ccccttagtg
     2341 tgtagtgaaa taatcgtcct ataatggatg actgagctcc acccttccaa cagagatgtc
     2401 tagacaatta gaggagacct gagtcctgac ccactggctg agcaccagct tcactacttt
     2461 agatgagtga tgacactgct cggacttgtg tgagaagggg aaggttgttc acttcagagg
     2521 gatatgtgag gattaagtga aatgatgcta tgattatgtc acacttggca cgtgacagaa
     2581 cagagcgcac acctttaata ccagcatttg ggaggcagag gcaggcagat ctctgcgttt
     2641 gagcccaccc cgatctacac agtgggctcc aggacagcca gggctacaca gaaatcctgt
     2701 cttgaaaaac aaaacttgtc tgagttgaga agaaaatggg taacaaccta tcattttatt
     2761 attataataa tatatttatt tttattttat tggtgttttt cctgcatgtg tgtctgtgtg
     2821 gggtgtcaga tctcctgaaa ctagagttac agacaattgt gagctgccat gtgattgctg
     2881 gggattgaac ctgggtcctc tgtaagaaca gccctgagcc atctcttcag cctccaaaat
     2941 atcattttat atggttttga ttaaagggaa atctggcgca tgcctttaat cccagcactc
     3001 gggaggcaga ggcaggcaaa tttctgagtt cgaggccagc ctggtctaca gagtgagttt
     3061 caggacagcc agggctacac agagaaaccc tgtctcgggg ggaaaaaagg ggggggggaa
     3121 tctgtaagac aatgctggaa ggtactctcc cgatgctgag aggatgcttt taaatcatgt
     3181 gtactgcatt ctagatggag ctcaataggc tgattctcca catcagctct ctctgtctct
     3241 ctagtcttct tgcaggctaa caataaatac cctaaatgtt taacatgtct ctagggcaat
     3301 agtttccagt cttctggaga tgaatttgtt tttgtgtgtt tagggatgga tcgattttca
     3361 ttgttttatg acttgaaaga agcaaaacat tgtctctaca gaggaataaa tatcactgaa
     3421 gtaagaaggc tgtaaactcg agaaaaatgc agtgctctgc aaaaaagtct ttgccgagct
     3481 ggcaatagct actcatttct ggtttttagc ctaacagatt aaagctttat ctccaactag
     3541 tgattggaaa cattgtcttc taacagttgg tgtagtgtca gaagcctcct cttagatggc
     3601 aagttttgga tgttggagct tagaatcctt ggattcatag tttgctcaca cgaagtagtc
     3661 cctgatgctc aagtgtgagc ctttcacctc ctgagtctac ttttgactgc tgcttcacaa
     3721 accttttgtg agaagcaaga aaaatgtggg atttgttttt gtgtgcaaag tatgaaactc
     3781 aagggggcag gtcacatggc ccagtgtgta aaggcaattg cctgaccaac ctgagtgtca
     3841 tcccagaacc cacgtaaagg tgaaaggaaa gagctgactc cacaaagttg tcttctgact
     3901 tccatacttg tgccgtggca tgtgagtgcc tgaacactct gtcacacaca ggcacacatc
     3961 tggcgcacat ataaaataac agtaagatat tttacagtat ggaacttatc agttgtagaa
     4021 aattatttta aataacttat taaaatccca ttccatcaag ccagatgtgg tggcccaaca
     4081 ctgaggaggc agaggcagat gcatctctga ctttggggcc aacctggtcc acagagggag
     4141 tgagttccag gatagctagg gctacctaga gaaacactgt ctcaaaaaga caaaaacaaa
     4201 caagcaaaat tcctttccat cactcataga tgtggcaggt gtcttatttg tcttatacat
     4261 atcacctcct tatttagaat ataattattt tattagcctt ggaaaaactg agctgacctt
     4321 cctgatatct gatccttccc actccactat tctttctata tgtatccctt attaactata
     4381 gactttcatc atgttcagag tctttctagt caatgcccca gacccagaag ccataaaaga
     4441 actgttacat gtcaccaacc gtgataacaa agtcacagat acataacaaa ctggggttgg
     4501 ctatcacagt gcatgccttc ctccaagcgc tcaggaagtg gatctctgtg agtaggaggc
     4561 tagcatggtc tacctagcca gttccagacc ctgtcccaaa gaaacaaact gggaacaacc
     4621 tgcagctcca atcctcagag tcaggtttca ggtggaaacc aagaaaactc actccaaaga
     4681 tggaagctta taaatgaaag cttcctttcc tgagcgctca gggaggcagt cagcttggga
     4741 tctgaacctc gtccctgagg ggaagctgta tcacagattt agaggaaaat gaggggggct
     4801 gaggggggct taggatcagc caatcatgtt ttgacattaa gggttaagtg agggaatatc
     4861 tgttggagac tgagcctttt ccaggacacc tggctttaag gcccttaact catcctccta
     4921 gatgtttggt ctggagctca agggaacaaa ggagctggtt agatgggtgc agttgatgag
     4981 agccgggcag gcagtctgtt atatattttt acaattcaga cacctttgtt aaaataacag
     5041 caagttttac ataaactggt aggtttatga ggcaattaag aaaatctttg gaggggcagg
     5101 gtaggagcag gtccctgagc ctggagatat gaacactgct tgaccctgtt aacaaaatgg
     5161 gggagcaaaa tgggagaatt gcttttgaga aggctgggct ccggtggctt gctccttata
     5221 gtcagcaaag ccctgccatt cctttgagca tatgagttta caagactcag ctgttatctc
     5281 ttcctttgaa aatacaatat cttcctgaaa tagtgttcct gaataggctt tgaatgtttt
     5341 tcttttatct gcaattcagg gttacctctc atgaatgcca cctatacttg tgtgcttatg
     5401 cgttctgtta agtgtgttca cacattgaac ttttgtttag atttttgcct ctcctgattg
     5461 gttatcagca agcttgtaag ggtctgactg tattaaatcg atgaggaggc tcataaatca
     5521 gtgatgtgac tgttaaacct taaaacttgt aggatgtttg caccctttgg cccaacagtt
     5581 tttcttctag aaaagtatcc tggagaaatg aacaagattt aataataaat ggacaaaatt
     5641 taataataac aa
//
