LOCUS       NM_001347245            6362 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus zinc finger protein 654 (Zfp654), mRNA.
ACCESSION   NM_001347245 XM_006522586
VERSION     NM_001347245.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 6362)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 6362)
  AUTHORS   Guo,G., Huss,M., Tong,G.Q., Wang,C., Li Sun,L., Clarke,N.D. and
            Robson,P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT030641.11 and BC068018.1.
            
            On Nov 19, 2016 this sequence version replaced XM_006522586.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660813.20652.1,
                                           SRR9219381.298897.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-257               CT030641.11        17225-17481
            258-403             CT030641.11        38339-38484
            404-485             CT030641.11        54242-54323
            486-621             CT030641.11        74392-74527
            622-824             CT030641.11        76977-77179
            825-964             CT030641.11        77722-77861
            965-1106            CT030641.11        80502-80643
            1107-1587           CT030641.11        82146-82626
            1588-6362           BC068018.1         1-4775
FEATURES             Location/Qualifiers
     source          1..6362
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 37.1 cM"
     gene            1..6362
                     /gene="Zfp654"
                     /gene_synonym="1600021C16Rik; 1810008K20Rik; 433036;
                     Gm5488; Znf654"
                     /note="zinc finger protein 654"
                     /db_xref="GeneID:72020"
                     /db_xref="MGI:MGI:1919270"
     exon            1..257
                     /gene="Zfp654"
                     /gene_synonym="1600021C16Rik; 1810008K20Rik; 433036;
                     Gm5488; Znf654"
                     /inference="alignment:Splign:2.1.0"
     CDS             72..3410
                     /gene="Zfp654"
                     /gene_synonym="1600021C16Rik; 1810008K20Rik; 433036;
                     Gm5488; Znf654"
                     /codon_start=1
                     /product="zinc finger protein 654"
                     /protein_id="NP_001334174.1"
                     /db_xref="CCDS:CCDS84250.1"
                     /db_xref="GeneID:72020"
                     /db_xref="MGI:MGI:1919270"
                     /translation="MAEEESDQEAERLGEELVAIVESPPGPVGLLAAGDGRGGAGGGG
                     CGGGVGISSRDYCRRFCQVVEDYAGRWQVPLPQLQVLQTALCCFTSASASFPDECEHV
                     QYVLSSLAVSFFELLLFFGRDEFYEEPLKDILGSFQECQNHLRRYGNVNLELVTRIIK
                     DGGPWEDPVLQAVLKAQPASQEIVNKYLSSENPLFFELRARYLIACERIPEAMALIKS
                     CINHPEISKDLYFHQALFTCLFMSPVEDQLFREHLLKTDCKSGIDIICNTEKEGKTLL
                     ALQLCESFLIPQLQNGDMYYIWELIFLWSKLQLKSNPSKQVFVDQCYQLLRTATNVRV
                     IFPFMKIIKDEVEEEGLQICVEICGCALQLDLHDDPETKCLIYKTIAHFLPNDLEIVR
                     VCALSVFFLERSLDAYHTVEELYRRPDEEYSEGMSTVQNRVRFELLPILKKGLFFDPE
                     FWNFVMIKKNCVALLRDKSAVKLLNENTLENPSSSLKKRVDQQSVEEDQSTGETDPDD
                     ASVVQPKGQVNVKRSLSALNTSKVDHSVPRHRCMLCNKEFLGGHIVRHAQAHQKKGSF
                     ACVICGRKFRNRGLMQKHLKNHVKKIQRQQIATAQQDDPEVITLEEINGSKSLISFEN
                     GNSNTKGLEIETLTASSERNKEVIREHMAEFIKIPIAIPENAIENIIENGKPDASFNN
                     ISESLPQCDDDYEEEENEDDYEDDYDLNQETSVLHKINGTVCHPKDVYATDQEGNFKC
                     PALGCVRIFKRIGFLNMHARTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHL
                     NRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCSFPECHELFEDLPLLYEH
                     EAQHYLSKTPESSAQLSEVVPNHQEIDPFSNENQTIHHPVSTSKSRKYSTEPKTYIDT
                     MEKKTDSLVHNGNEHSDDTVSNISLIDQKMPAIEPNPENTHSTTDLVNGHSEIEQTPL
                     VTSDPTLKIDINRNRTENGSILPSVESQEHSALSVSQAPSKPNLTSEQTSYGLIVTKP
                     FVRPLPPSYLDERYLSMPKRRKFLTDIVDACSDQDNMYKKPVKRLRCGKCLTTYCNAE
                     ALEAHLAQKKCQTLFGFDSDDESA"
     exon            258..403
                     /gene="Zfp654"
                     /gene_synonym="1600021C16Rik; 1810008K20Rik; 433036;
                     Gm5488; Znf654"
                     /inference="alignment:Splign:2.1.0"
     exon            404..485
                     /gene="Zfp654"
                     /gene_synonym="1600021C16Rik; 1810008K20Rik; 433036;
                     Gm5488; Znf654"
                     /inference="alignment:Splign:2.1.0"
     exon            486..621
                     /gene="Zfp654"
                     /gene_synonym="1600021C16Rik; 1810008K20Rik; 433036;
                     Gm5488; Znf654"
                     /inference="alignment:Splign:2.1.0"
     exon            622..824
                     /gene="Zfp654"
                     /gene_synonym="1600021C16Rik; 1810008K20Rik; 433036;
                     Gm5488; Znf654"
                     /inference="alignment:Splign:2.1.0"
     exon            825..964
                     /gene="Zfp654"
                     /gene_synonym="1600021C16Rik; 1810008K20Rik; 433036;
                     Gm5488; Znf654"
                     /inference="alignment:Splign:2.1.0"
     exon            965..1106
                     /gene="Zfp654"
                     /gene_synonym="1600021C16Rik; 1810008K20Rik; 433036;
                     Gm5488; Znf654"
                     /inference="alignment:Splign:2.1.0"
     exon            1107..3402
                     /gene="Zfp654"
                     /gene_synonym="1600021C16Rik; 1810008K20Rik; 433036;
                     Gm5488; Znf654"
                     /inference="alignment:Splign:2.1.0"
     exon            3403..6332
                     /gene="Zfp654"
                     /gene_synonym="1600021C16Rik; 1810008K20Rik; 433036;
                     Gm5488; Znf654"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3802..3807
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp654"
                     /gene_synonym="1600021C16Rik; 1810008K20Rik; 433036;
                     Gm5488; Znf654"
                     /note="hexamer: AATAAA"
     polyA_site      3827
                     /gene="Zfp654"
                     /gene_synonym="1600021C16Rik; 1810008K20Rik; 433036;
                     Gm5488; Znf654"
                     /note="major polyA site"
     regulatory      6308..6313
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp654"
                     /gene_synonym="1600021C16Rik; 1810008K20Rik; 433036;
                     Gm5488; Znf654"
                     /note="hexamer: AATAAA"
     polyA_site      6332
                     /gene="Zfp654"
                     /gene_synonym="1600021C16Rik; 1810008K20Rik; 433036;
                     Gm5488; Znf654"
                     /note="major polyA site"
ORIGIN      
        1 gcagcggcgg cggcagcggc ggcggcggcg gcggcgcagg ggctgggtac gcgctgggcg
       61 gcgagagcct catggcggag gaagagagcg accaagaggc cgagcgcctc ggagaagagc
      121 tcgtggccat tgtggagtcc cccccgggcc cagtggggct cctagctgcg ggcgacggca
      181 gagggggggc cggcggcggc ggctgtggcg gcggcgtcgg gatcagcagc cgggattact
      241 gccgacgctt ctgtcaggtg gttgaagatt acgctggacg ttggcaggtc ccgttgccac
      301 agcttcaggt tcttcagact gcactgtgct gtttcacgtc agccagcgcg tcgttcccag
      361 acgagtgtga gcacgtacag tatgttttga gtagtcttgc tgtgagtttc tttgagttgc
      421 tcctattctt tggaagagat gagttttatg aagaaccctt aaaggatatt cttggctcat
      481 tccaggaatg ccagaaccac ctccgcagat atggaaatgt gaatcttgaa ctggtgactc
      541 gaatcattaa agatggtggc ccatgggaag acccagtgtt gcaagctgtt cttaaagccc
      601 aaccggcatc tcaggagata gtgaacaaat acttaagttc tgaaaatcca ctgttctttg
      661 aactacgtgc cagataccta attgcctgtg aacgcatacc tgaagcaatg gctcttatta
      721 aatcttgtat aaatcaccct gaaatcagca aagacttgta cttccatcaa gcactcttca
      781 cctgtctgtt tatgtcacct gtagaagatc agctattccg tgagcatttg ttgaaaactg
      841 actgtaagag tggaattgat atcatctgta acactgaaaa agaaggcaag actttgctag
      901 ccttacagct ctgtgaatcc tttcttattc cacagctcca gaatggggac atgtactaca
      961 tatgggagtt gattttccta tggagtaaac tacagcttaa atctaatcct tccaaacaag
     1021 tgtttgtaga tcagtgttac cagcttttaa gaacagcaac taatgtgaga gtcatatttc
     1081 cttttatgaa aatcattaaa gatgaggttg aagaagaagg cctacaaatt tgtgttgaga
     1141 tctgtggttg tgctctccag cttgatctcc atgatgatcc tgaaactaaa tgtctaattt
     1201 ataaaacaat tgcacatttt ttgccaaatg atctagagat tgtcagggtt tgtgctctct
     1261 cagtattttt tcttgagcgt tccttagatg cctaccacac cgttgaagag ctttacagac
     1321 gtccggatga agagtatagt gaaggcatga gtactgttca aaaccgtgtt cgttttgaat
     1381 tacttccaat tttgaaaaag ggattgtttt ttgatcctga gttttggaac ttcgtaatga
     1441 ttaagaaaaa ctgtgtggca ttactgcgtg ataaatcagc agtgaaactt ctaaatgaaa
     1501 atacactgga aaatccttca agtagtctaa aaaagagagt ggaccagcag agtgtggaag
     1561 aagatcagag cactggagag actgatcctg atgatgcgtc tgtagtgcaa cctaaaggac
     1621 aggttaatgt gaagagaagc ctgtctgctc ttaacacctc caaagtggat catagtgtcc
     1681 caagacatcg gtgcatgtta tgcaacaagg aatttcttgg tggccacatt gtaaggcatg
     1741 cccaggctca tcagaaaaaa ggcagttttg catgtgtgat atgtggtagg aaatttagga
     1801 acagaggact tatgcagaag catttaaaaa atcacgttaa gaagattcag agacagcaga
     1861 ttgctactgc acaacaggat gatccagaag tcatcacttt ggaagaaata aatggttcca
     1921 aatctttaat ttcctttgaa aatgggaatt caaatactaa gggcttggaa atagagacat
     1981 tgacggcttc cagtgagaga aacaaagagg tcatccgtga acacatggct gagttcatta
     2041 aaattcccat tgctatacca gagaatgcta tagaaaacat tattgaaaat ggcaaaccag
     2101 atgcttcttt caataatatc tcagaatctt tacctcagtg tgatgatgac tatgaagagg
     2161 aagagaatga agatgattat gaagatgatt atgatttgaa tcaagaaaca tcagtgcttc
     2221 acaaaatcaa tggaactgtg tgccatccaa aagatgtata tgctacagac caagaaggca
     2281 acttcaagtg tcctgctctt ggctgtgtaa ggatatttaa aagaattggg ttcctaaata
     2341 tgcatgcaag gactgtgcat ccaactgatt taaatgtgcg gcaaactgta atgaagtgga
     2401 gtaaaggaaa gtgcaaattt tgccaaaggc agtttgagga ttctcaacat tttatagatc
     2461 accttaatag acacagctat ccaaatgtgt acttctgttt gcatttcaat tgcaatgagt
     2521 catttaagct gccatttcag cttgcccagc atacaaaaag tcacaggata tttcaagctc
     2581 agtgtagttt tccagaatgc catgagcttt ttgaagatct tcctctgtta tatgaacatg
     2641 aagcccagca ttacttgagc aaaacaccag aatcatctgc acagctgagt gaagtggttc
     2701 ctaaccatca agaaatagac ccatttagta atgagaacca aactattcat catccagttt
     2761 ctactagtaa gtcaaggaaa tattctacag aaccaaagac atatatagac actatggaaa
     2821 agaaaacaga cagtttagtt cataatggaa atgaacattc tgatgatact gtttcaaata
     2881 taagcttgat agaccaaaag atgcctgcca tagagccaaa tcctgaaaat actcatagta
     2941 ccactgactt agtcaatgga cacagtgaaa tagagcaaac accattagtt acatcagatc
     3001 ctactctgaa aatagatata aacagaaaca ggacagaaaa tggttctatt ttacccagtg
     3061 ttgaatcaca agaacacagt gccctgtcag tatctcaggc accatccaaa ccaaatctta
     3121 caagtgaaca gacttcatat ggcttaattg taacaaagcc atttgtcaga cctttgcccc
     3181 ccagttacct tgatgaacga taccttagta tgccaaaacg cagaaaattt ctcaccgata
     3241 ttgtagatgc ctgttctgat caagataaca tgtataaaaa accagtgaaa agattacgat
     3301 gtggcaaatg cctgaccacc tactgtaatg cagaagcact tgaggctcac cttgcacaaa
     3361 agaaatgtca gacactcttt ggatttgatt cagatgatga aagtgcctga taatgtctca
     3421 gaacgatttg ttgatcatgc agtagtgttt aaaaaaagca ctacaagaaa atgcatcatc
     3481 agcttgctat ttccctgatg gccttaattt tagagtggtc tcggattact aaagaaaaga
     3541 caaagcacat tttctggaat gaacttgcag aggagatgtg ccggcttaga ctccaaaagg
     3601 gttataaaac tcccaaagta ccagttatcc atgaaaccac actttaaaaa agtttatggt
     3661 gattaatagc agcatgttca gttttgcttt atgtgaaaac acatttgggt aactagtcag
     3721 aaatacaaac cagctatggc cttactgaag aaaggaaaaa gttgattcat tctaagatga
     3781 gatggagggg agctggttta caataaacat gtaaaacact ctgaaaatgg aatttgtttt
     3841 cttgtcctgc atattcatta tgtcttccct tctggtcaac atattttaaa gaatcattca
     3901 ttgctcttta gtttgtgata taatttagaa gctgatacat agaaataaag tttgatttat
     3961 gaccatgctg tctactaaca attgtaactt gttttaggca attaagtaga caggtcaaag
     4021 ttcagtgaat ggcatgccac cattgaaaaa tttaaaacaa aacaaaaaca gtgcttggct
     4081 aataagctct tgataagaac cttcaatgcc ccacttttgt aaagtcagtg atttaaaggc
     4141 agcagcctta agtagacaag aaaagtgcca tcggatactt tgggggtggt ggtgaaaaga
     4201 atctaagacc atcacattct acatagttga aggaaaacac tgaattgaaa aatcttgaat
     4261 gtgaataatg gtaaaagcac actgggatat tcctatctgt acatattagg actttgctag
     4321 atgattcata gtaaaatcct ttatacatta gtatgagtta tctaagtatg gtcctatgaa
     4381 aataattggc ttaaaagtat gtcagttaag agtccaagag ttcattttat tcagttagga
     4441 gaattaattc aaagttaagc catactaaca tgctttcttc atcagtgatg aatttggcct
     4501 gcatagtagt ttttatattt aaggaagtac ttacatcaaa atttgcacaa caggaataca
     4561 gtaacatata ttaatgcact gttgttcttg gtgaccattc gaagaaagat tttaacttat
     4621 taagttatta aaacaaatat tttagtttaa aaaatcttcc agatatttcc cacctgtctg
     4681 ttatgaaaag gaaaatacat aaagatctcc tttacctgat agtatataag tctaaacgag
     4741 acaaaaacat acaaacacaa aggtgaattc tttaaacaca ttagtatgcc aattaagtgt
     4801 cccagctact ccagcatggt tttgtgtaaa tcagacaatg tcatcatact acaaatttta
     4861 ggaacattct tgaggttagg aaaataggac attactttca gggtggcatt cagactttta
     4921 aaaactatgt tttccaataa tgctctatca gaatatttat ttttttatta tttaccatgg
     4981 gcatttgcaa ctatgcaatg atggtcacta gtccattccg atcaaattga agtttgtttt
     5041 agttttatta tgtagcctac attaggctgt gtaatttacg tgaagataac agataagtac
     5101 aactcatatg ttttaaatcc tttaagttca actcaaaatg ttttccatat ttcttgacac
     5161 taaaaatgta ataattgact tttagttcat attaaaagta catcttgtaa taaaaatcct
     5221 gtttggaaac tggttcattt gcacaatgaa tttttggggg aacataattt ctgctttgta
     5281 cactttgcag ttaataacat tttaccattt tttaacttta ttttttacag gttgtaacca
     5341 ctgatataga tacaaatcca taaagcatta cattttctta gtttgtgtgc aaagatgtgt
     5401 taagcaaatt ccgcctgtta ttttattttg tcttttaagc ttaatttgaa ggttttcttt
     5461 tggcttttgt tgctaggaga acattttcct atagataaaa ttggttcata tataatcaac
     5521 acaaaatgtc gtgtaaaatt ctgtttgacc acatttttct aacctcttta tatacttctc
     5581 aattttacct gttgaaagaa tttgtgcatt ctattttgtt ttttctccaa agcattttgc
     5641 ttttgtgtaa atccagcagt tgtgatttgt gattcagaag ggaaggaagc tttcatccac
     5701 ccacatgctt ttccttctcc ttggtttcta ctcatgtttt gaggatacac gaactccttt
     5761 taaatgtttg ttttacaata attatatgtg gtcaagtaag gtcaaggaaa gtgcagatct
     5821 gaatccttgc tgctcagaca cagaagatgc acaggaaaga atctccgtgg ataaggacac
     5881 tggtactttg ggctctagcc atattcattt ttaaaaaaaa acaccaatat ataacaaact
     5941 acaatttata tcattgatct gtgattcttt tccaatcaca ctgaacattt agctgtactt
     6001 tcatgtttgg tttaatagtg tatgaatgaa aagcctaaaa gggatgatag tgtttatttt
     6061 ttaatttatt tggtactgtc aaacaccttt tcagaatgag caaatgctgc atttgcattt
     6121 tggtattgtt atgtgaaaga tattacagat tcagcaagaa ggaaaatttg tgcttccttg
     6181 ttgaacatta aattatttta ctttgcattt tataaaagta caaattaaaa ctgagccatt
     6241 gaactgcaat aaatcaacaa tagtgtctca tttcaagaaa ttttttgtat tgtacataga
     6301 tttgttcaat aaaacattgt ccttgttgat aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     6361 aa
//
