LOCUS       NM_001402903            3989 bp    mRNA    linear   ROD 17-APR-2022
DEFINITION  Mus musculus zinc finger protein 65 (Zfp65), transcript variant 2,
            mRNA.
ACCESSION   NM_001402903 XM_030247247
VERSION     NM_001402903.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3989)
  AUTHORS   Guo G, Huss M, Tong GQ, Wang C, Li Sun L, Clarke ND and Robson P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
REFERENCE   2  (bases 1 to 3989)
  AUTHORS   Taniwaki T, Haruna K, Nakamura H, Sekimoto T, Oike Y, Imaizumi T,
            Saito F, Muta M, Soejima Y, Utoh A, Nakagata N, Araki M, Yamamura K
            and Araki K.
  TITLE     Characterization of an exchangeable gene trap using pU-17 carrying
            a stop codon-beta geo cassette
  JOURNAL   Dev Growth Differ 47 (3), 163-172 (2005)
   PUBMED   15840001
REFERENCE   3  (bases 1 to 3989)
  AUTHORS   Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng
            EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC,
            Babbitt PC and Ferrin TE.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   4  (bases 1 to 3989)
  AUTHORS   Araki K, Imaizumi T, Sekimoto T, Yoshinobu K, Yoshimuta J, Akizuki
            M, Miura K, Araki M and Yamamura K.
  TITLE     Exchangeable gene trap using the Cre/mutated lox system
  JOURNAL   Cell Mol Biol (Noisy-le-grand) 45 (5), 737-750 (1999)
   PUBMED   10512203
REFERENCE   5  (bases 1 to 3989)
  AUTHORS   Marine JC, Gilbert DJ, Bellefroid EJ, Martial JA, Ihle JN, Copeland
            NG and Jenkins NA.
  TITLE     Chromosomal location of fifteen unique mouse KRAB-containing zinc
            finger loci
  JOURNAL   Mamm Genome 7 (6), 413-416 (1996)
   PUBMED   8662221
REFERENCE   6  (bases 1 to 3989)
  AUTHORS   Bellefroid EJ, Marine JC, Matera AG, Bourguignon C, Desai T, Healy
            KC, Bray-Ward P, Martial JA, Ihle JN and Ward DC.
  TITLE     Emergence of the ZNF91 Kruppel-associated box-containing zinc
            finger gene family in the last common ancestor of anthropoidea
  JOURNAL   Proc Natl Acad Sci U S A 92 (23), 10757-10761 (1995)
   PUBMED   7479878
REFERENCE   7  (bases 1 to 3989)
  AUTHORS   Ihle JN, Smith-White B, Sisson B, Parker D, Blair DG, Schultz A,
            Kozak C, Lunsford RD, Askew D, Weinstein Y et al.
  TITLE     Activation of the c-H-ras proto-oncogene by retrovirus insertion
            and chromosomal rearrangement in a Moloney leukemia virus-induced
            T-cell leukemia
  JOURNAL   J Virol 63 (7), 2959-2966 (1989)
   PUBMED   2542606
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CT030194.5.
            
            On Mar 23, 2022 this sequence version replaced XM_030247247.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR17253012.5055261.1,
                                           SRR17253011.6102566.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849379
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-145               CT030194.5         87482-87626         c
            146-272             CT030194.5         74175-74301         c
            273-368             CT030194.5         73609-73704         c
            369-3989            CT030194.5         68603-72223         c
FEATURES             Location/Qualifiers
     source          1..3989
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 34.7 cM"
     gene            1..3989
                     /gene="Zfp65"
                     /gene_synonym="KRAB5; pz114; Zfp71-rs1"
                     /note="zinc finger protein 65"
                     /db_xref="GeneID:235907"
                     /db_xref="MGI:MGI:107769"
     exon            1..145
                     /gene="Zfp65"
                     /gene_synonym="KRAB5; pz114; Zfp71-rs1"
                     /inference="alignment:Splign:2.1.0"
     CDS             110..1312
                     /gene="Zfp65"
                     /gene_synonym="KRAB5; pz114; Zfp71-rs1"
                     /note="isoform 2 is encoded by transcript variant 2; zinc
                     finger protein 71, related sequence 1"
                     /codon_start=1
                     /product="zinc finger protein 71, related sequence isoform
                     2"
                     /protein_id="NP_001389832.1"
                     /db_xref="GeneID:235907"
                     /db_xref="MGI:MGI:107769"
                     /translation="MEVSAGSSATFQEMLSFRDVAIDFSEEEWECLGPAQWNLYRDVM
                     LENYSHLVFLGLALSKPYLVTCLEKIQETSGVKRGGAPFMLPGGKCYTCTECGKIFEW
                     KKVFQNHQMLDLRMNPYKCEECAKSFHSPSLSSKESRIHTGGKPYKCEVCGKAFCIPL
                     LLSKHKIIHTVEKPYKCDICGKAFQYPSKLSRHKQIHSEEKPYKCEVCGMAFHFPSLL
                     LVHKRIHTGEKPYKCEECGKAFRNSSFLSKHKIIHRGEKPYKCEVCGKDFHYPSRLYN
                     HKKIHSGEKPYKCELCGKAFCFPSSLSKHKRIHTGEKPYKCKECEKPFCYLSSLSKHK
                     IIHTGEKPYKCDLCGKAFRYPSLLSEHKVIHTGNKPYKCEVCGKAFHFSSQLKKHKKI
                     HGAGDMAQ"
     exon            146..272
                     /gene="Zfp65"
                     /gene_synonym="KRAB5; pz114; Zfp71-rs1"
                     /inference="alignment:Splign:2.1.0"
     exon            273..368
                     /gene="Zfp65"
                     /gene_synonym="KRAB5; pz114; Zfp71-rs1"
                     /inference="alignment:Splign:2.1.0"
     exon            369..3989
                     /gene="Zfp65"
                     /gene_synonym="KRAB5; pz114; Zfp71-rs1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gacgtcatca gaaagggccc tcggactcgt gcttccttat tctttcttca aacttcactc
       61 ctcaaatgta tgcagttgtc ctactcaaag ctgcatctag atttctgaga tggaggttag
      121 tgcagggagc agcgccactt ttcaggaaat gctgtcattc agggatgtgg ccattgattt
      181 ctctgaagag gagtgggaat gcctaggtcc tgctcagtgg aatttgtaca gggatgtgat
      241 gctggagaat tacagccacc ttgtgttcct gggtcttgct ttgtctaagc catatctggt
      301 cacatgtctg gagaaaatac aagagacttc aggtgtgaaa agaggaggag ctccatttat
      361 gctcccagga ggaaaatgct atacgtgcac agagtgtggc aaaatctttg agtggaaaaa
      421 agtgtttcaa aatcaccaga tgcttgattt acgaatgaat ccctacaagt gtgaagaatg
      481 tgccaagtct ttccatagtc catcattaag ttctaaagag agcagaattc atacaggagg
      541 gaaaccttac aaatgtgaag tttgtggcaa ggccttctgc attccattat tactttctaa
      601 acacaagata attcatacag tagagaaacc ctacaagtgt gatatatgtg gcaaggcctt
      661 ccaatatcca tcaaaacttt ccagacataa acagattcat tcagaagaga aaccatacaa
      721 gtgtgaagta tgtggaatgg ccttccactt tccatcatta cttttggtac acaagcgaat
      781 tcatacagga gagaagccat acaagtgtga agaatgtggc aaggccttcc gcaattcatc
      841 atttctttct aaacacaaaa taattcatag aggagaaaaa ccctacaagt gtgaggtatg
      901 tggcaaggac ttccattatc catcaagact ttacaaccat aagaaaatcc attcaggaga
      961 gaaaccatac aagtgtgaat tatgtgggaa ggccttctgt tttccttcat cactatctaa
     1021 acacaagaga attcacacag gagagaaacc atacaaatgt aaagagtgtg aaaagccctt
     1081 ctgctatctg tcctcacttt ctaaacacaa gatcattcat acaggagaga aaccctacaa
     1141 gtgtgactta tgtggcaagg ccttccgtta tccatcatta ctttctgaac acaaggtaat
     1201 tcatacagga aataaaccct acaagtgtga agtatgtggc aaagccttcc atttttcctc
     1261 acaacttaaa aagcataaga aaattcatgg ggctggagac atggctcagt agttaaatca
     1321 actgtctgca ctttcaattg tgctgtcctg agttcaattc ctggcaacta catgctggct
     1381 cacaaccatg tatgatggaa tctgtttccc tattctggta tgtagggata catgcaggta
     1441 gagaactcat acacataaaa taaatatgtt attttaaaaa ttgatggtat gttacctggt
     1501 gcctaaaaaa gaataccaga gaacaaccaa cgctactaat ggaataatgt ggcaaggact
     1561 tccaatgacc agcactattt tctaacccca agagaaatca tatgggaaag aaaccctcca
     1621 attaggaagt atgtagcctg atcctctatt gtccataatt actttctgaa cacaggagaa
     1681 tacacacagg ttagaaaccc tacatttatt aagtgcaagt caactccttt agaatttgcc
     1741 agttttttct actcgtttta tgtggaaaag ccttttctac aaatatacac cagtgtttac
     1801 acaaattaac tcatagtgtg gtgatattta caaatacaaa gaatatgtcc aagtgttcaa
     1861 aaaaaaactt tagggatcat caaaaattca tttttgagga aagcagaaaa cccggtctga
     1921 ccagggtcac aagtcccttc cagtcggccc aagcaccggg tcaccttggg ctcgaagtcc
     1981 gcaggcaccc ccaaggtccc tagggacaca atgaaactaa caaaagttat gaacatggat
     2041 ttaacagata tctacagaac attttatcct aaagcaaaag gatatacctt cttctcatca
     2101 cctcatggta ccttctccaa aattgaccat ataattggtc acaaaatagg cctcaacaga
     2161 tacaaaaata tggaaatcag tctggcagtt cctcagaaaa ttggacatag tactaccaga
     2221 gggttgtcca atacctctcc tgggcatcta tccagaagat gttccaactg gtaagaaaga
     2281 cacatgctcc actatgttca tagcagcctt atttataata gccagaagct ggaaaaaacc
     2341 tagatgtccc tcaacagagg aatggataca gaaaatgtgg tacatttaca taatggagta
     2401 cttctcagct attaaaaaga atgaattttt gaaatttcta ggcaaatgga tggacctgga
     2461 gggcatcatc ctgagtgagg taacccaatc acaaaagaac tcacatgata tgtactcact
     2521 gataagtgga tattatccca gaaatttaga atatccaaga tacaagatac aatttgcaaa
     2581 acacatgaaa ctcaagaaga acaaagagca aagtgtggag actttgccca ttcttaaaat
     2641 tgggaacaaa acacccatgg aaagagttac agagacaaag tttggagctg agatgaaagg
     2701 atggaccatc tagagactgc catacccagg gatccatcct ataatcagcc accaaacgct
     2761 gacaccattt catacactag aaagattttg ctgaaaggat ccagatatag ctgtctctta
     2821 tgaggctatg ccagggccca gcaaatagag aagtggatgc tcacagtcag ctactggatg
     2881 gatcacaggg ttcccaatgg tggagctaga gaaagtaccc aaggagctaa agaggtctgc
     2941 acccctatag gtggaacaac aatatgaact aaccagtacc ccccagagct cgtgtcttta
     3001 cctgcatatg tatcaggaga tggcctagtc gaccatcatt ggaaagagag gcccattggt
     3061 cttgcaaact ttatatgctt cagtaaaagg gaacgccagg gctaagaagt gggagtgggt
     3121 gggtagagga ttgggagcaa tggtataggg gacttttggg atagtattgg aaatgtaaat
     3181 gaagaaaata cccaatgaaa aaattttttt aaaaattaag agaactgtaa ataaataaat
     3241 aaataaatgt catcaaccca tgaagaaaaa aaatttcatt ttgcagagaa aacatataaa
     3301 tctaaagaat gtggcaaata tcagaagtta caaagcatga tctgaatacc ggataattcc
     3361 tactggagag aaacattaca attgtggaga atgtggcaaa acctattacc agtcttgtgg
     3421 tcttaaacaa cattcaaaaa ttcacctatg agagaaacca cacgagtgtg gagaatgttc
     3481 caaggtcttt tgtacttact aagaacttgt gaaacacctc ataattcata caaaactgaa
     3541 ataccacatg tggaaaatgt tgcaaacctt tattaaactt tcttatattt ctcaaagtaa
     3601 ttcaaactgg agtgaaataa tagaaatgtt aaatattcat aatatgttaa cacttcttca
     3661 gacactaaaa gctccttcct gaataaaaac catataagat tgaggaatgg ggcaagtaaa
     3721 gactttggaa tcattcacac aatcatgcca aaagtagagc tgtcagatta tgtgtttgtt
     3781 ctccgcattt agggctgatc tttcctgggt gtcttttgtt tcttctgttt tagaatcaga
     3841 acacatattc tataccagtg agtagtaaaa atagtgtctt gttcttatgt tgtaagagct
     3901 cacacataag agattgcctt gagtgtcatg tgacacatgg accgtgagtt ttcatagtgt
     3961 tgtaattatt aaatctttta tggaccttt
//
