LOCUS       NM_001404059            6412 bp    mRNA    linear   ROD 13-JUN-2024
DEFINITION  Mus musculus zinc finger protein 646 (Zfp646), transcript variant
            3, mRNA.
ACCESSION   NM_001404059 XM_017322215
VERSION     NM_001404059.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 6412)
  AUTHORS   Guo,G., Huss,M., Tong,G.Q., Wang,C., Li Sun,L., Clarke,N.D. and
            Robson,P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
REFERENCE   2  (bases 1 to 6412)
  AUTHORS   Okazaki,N., Kikuno,R., Ohara,R., Inamoto,S., Koseki,H., Hiraoka,S.,
            Saga,Y., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: III. the complete nucleotide sequences of 500 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 10 (4), 167-180 (2003)
   PUBMED   14621295
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC149222.4.
            
            On Apr 7, 2022 this sequence version replaced XM_017322215.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR17784650.1392483.1,
                                           SRR10223971.8178.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-304               AC149222.4         76850-77153         c
            305-509             AC149222.4         75955-76159         c
            510-5858            AC149222.4         70144-75492         c
            5859-6412           AC149222.4         68066-68619         c
FEATURES             Location/Qualifiers
     source          1..6412
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 69.8 cM"
     gene            1..6412
                     /gene="Zfp646"
                     /gene_synonym="6820429M01"
                     /note="zinc finger protein 646"
                     /db_xref="GeneID:233905"
                     /db_xref="MGI:MGI:3665412"
     exon            1..304
                     /gene="Zfp646"
                     /gene_synonym="6820429M01"
                     /inference="alignment:Splign:2.1.0"
     exon            305..509
                     /gene="Zfp646"
                     /gene_synonym="6820429M01"
                     /inference="alignment:Splign:2.1.0"
     exon            510..5858
                     /gene="Zfp646"
                     /gene_synonym="6820429M01"
                     /inference="alignment:Splign:2.1.0"
     CDS             593..5959
                     /gene="Zfp646"
                     /gene_synonym="6820429M01"
                     /codon_start=1
                     /product="zinc finger protein 646"
                     /protein_id="NP_001390988.1"
                     /db_xref="GeneID:233905"
                     /db_xref="MGI:MGI:3665412"
                     /translation="MEDMPLSFSCSDCQRHFPNLPELARHRELRHSSAKQDGEEADGI
                     PHPYGSHPENLANHQRNHETLFFPCTTCGKDFSNRLALQSHMRTHAPESHRRHGPPHA
                     METAPHLGSETMATDSWGQRLGSGEGWENQTKLVRETHDWESGADPRAASGTWEDPPT
                     KQRQGLEMQPDSKGGTADWVPAVSSEGASPLPTPASNLLSNLEQYLAESVVNFTEAQE
                     PTEPLPTEGERKYRCSECGKTYKHAGSLTNHRQSHTLGIYPCSICFKEFSNLMALKNH
                     SRLHAQYRPYHCPHCPRAFRLPRDLLEHQQSHEGLKQEQPWEDKEMPTTNGHADERSW
                     GQLSKTGMLNGSGELSSSGQLEDGGSEEYRPFCCGDCGRTYRHAGSLINHRKSHQTGI
                     YPCSICSKQLFNAAALKNHIRAHHRPRQGAGEGGQSSVSSTALTSAENTPKVDEVPTA
                     SLDHRPYKCNECGRAYRHRGSLVNHRHSHRTGEYQCSLCPRKYPNLMALRNHVRVHCK
                     ATRRSTDPGTEGSPSPVKKEQHDPVGMEAAFHGDEEHACKREEEATSNPSMADRTVPQ
                     VCSICGMLFEDLKSLEHHSVTHREGEKSRTDSTVSPTRTFACQDCGKSYRHSGSLINH
                     RQTHQTGDFSCGACAKHFHTMAAMKSHLRRHSRQWNRRRQKQDSGTGEVATLPPGGAW
                     TLKLENDEDPDSSQDPLGESPCETEDNLERDGDCLQAGSRGNECVLKREEACFLGDKE
                     GTEEGLEEREACFLDDLGTPGDECNETGFCGGLPGMDSDRKRGICHSDSSSHPADADT
                     VWKAAATHTCSDCGDSFSHAAGLLSHRSCHPPGIYQCSLCPKEFDSLPALRSHFQTHR
                     PGEVASAQPFLCCLCGMIFPGRTGYRRHLRQAHGASAMTEGSEEEEEGTAETASTHSP
                     PLQLSEAELLNQLQREVEALDGAGYGHICGCCGQTYDDLGSLERHHQSQSSSNRTENV
                     PSHLEGAGDATEMVADHGFEGTVTSVSEEGGDIKSEEGVGGTVADSLCMQAGESFLES
                     HPRPFQCNQCGKTYRHGGSLVNHRKIHQTGDFICPVCSRCYPNLAAYRNHLRNHPRCK
                     GSEPQMGPISEAGGCSEPQNAAEAGQEQAVIGQLQEELKVEPLEELAGVKEEVWEGTA
                     VKEEELEQELETGCQTEVTSERPFSCEVCGRTYKHAGSLINHRQSHQTGHFGCQACSK
                     GFSNLMSLKNHRRIHADPRQFRCSECGKAFRLRKQLANHQRVHAERRRSRGTQKLTRE
                     DRPFRCGQCGRTYRHAGSLMNHQCNPEASRYSCPFCFKTYSNRTALKDHQRVHSDSQQ
                     RRQSGCPQRAAAVRCTLCGCGFSGQGSLEQHLQEHEDTKLEVASGQGGQHATEGSEEN
                     LDDWGLEGRSDGTEVLQVEHETKRPGGHSQSPSSPACSGGTESTQQVGKVDGSQGDRG
                     QMNHNGAWVLQDQLTKPEGKLEDTVSRNPCHLSESQSNGPTLRYRDSWKGADSGSQLQ
                     PESHCCSQCGKAYCQPDGLLNPSINGKDCHICLLCSKEFLNPVTTEIHNHTTAQRFAC
                     SNCSKVCESHSELATHMKTHAVEHSQMSGQMEKTRGPQAGMAEVGPPGPGKAQEAPSE
                     LPGDPEENGVPANGGQGIHFPAAEDKERPFCCAQCGRSYRHAGSLLNHQKAHTIGLYP
                     CSLCPKLLPNLLSLKNHSRTHTDPKRYSCNICGKAFRTAARLQGHGRVHAPQEGPFTC
                     SHCPRRFRHRISFLRHQQQHQEEWPVSSSGASVAPAASREDSSTASLPNPSPQWPADL
                     SLSL"
     exon            5859..6412
                     /gene="Zfp646"
                     /gene_synonym="6820429M01"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      6412
                     /gene="Zfp646"
                     /gene_synonym="6820429M01"
                     /note="major polyA site"
ORIGIN      
        1 aggacacttc ctggttcctg gtaacaatag gaagtgtccg cggaactggg ctagactctg
       61 ggttcatacc agctgtccct gctccctcta cctcctcctc tctcccgcac ctttccctca
      121 gctaccactc ccgggtaccc tggctgagtg tgcgtgtgta tgggctcgag aactctcgca
      181 ccagccacca cttatggctc gcggctgcag ttagggtaag ggtcccagtg cgcaggcgcg
      241 ctcccgttca cgacctccaa cggacgcgcc ggcggcggga accagaaggc actcctggtg
      301 cgaggtgacc actgaagcca ggttcgtccc taagagggcc tctaccttct acaacacata
      361 ggtgaccact gaagaaagca gctgctctgc cattcttttc agaccactcg gtttagctga
      421 agagtgaaga aagaaaggtt gcacgtctgt gtaaggcctg cccaacagtc gtggctgtct
      481 ccttcaatct caactctcag gagtctgagg cctcagccct tctgcagaga gaatgctgct
      541 gccacctgtc tgtccctcct gagcctccag gggttttcta ccgctttgcc tcatggagga
      601 catgcccctc tcattcagtt gctctgactg tcagcgccac tttcctaacc tcccagaact
      661 ggcacggcat cgagaactgc gccattcatc tgctaagcag gacggggagg aagccgatgg
      721 catccctcac ccctatggca gtcacccgga gaacttggcc aaccatcaga ggaaccatga
      781 gactcttttt ttcccctgta ccacctgtgg caaggatttt tctaatcgct tggccctcca
      841 gagccatatg aggactcatg ctcctgagag ccaccgaagg cacgggcctc cacatgccat
      901 ggaaaccgct ccacaccttg ggagtgagac catggctact gactcctggg gtcagaggct
      961 tggatctggg gaaggctggg aaaatcagac gaagttggta cgagagacac atgactggga
     1021 atctggagct gaccccaggg cagcgtcagg gacgtgggaa gatccaccta ccaaacaaag
     1081 acaaggctta gaaatgcagc cagattctaa aggaggtacg gcggactggg tgcccgccgt
     1141 cagttccgaa ggagcatcac cactccccac tccagcgagc aaccttctta gcaatttgga
     1201 acagtatttg gctgaatcag tagtgaactt cacagaggcc caggagccca ctgagcctct
     1261 tcctactgag ggggagcgaa agtacaggtg cagtgagtgc gggaagacct ataagcatgc
     1321 cgggagcctc accaaccacc gccagagtca cactctgggc atctaccctt gttccatctg
     1381 tttcaaggag ttctctaacc tcatggccct gaagaaccac tcgagactcc atgcccagta
     1441 tcggccttac cactgtcctc actgcccccg tgcctttcgg ctccccaggg atctgctgga
     1501 acatcagcag tcccatgagg ggctaaagca ggaacaacca tgggaagaca aagagatgcc
     1561 taccacaaat ggacacgcag atgagaggag ttggggtcag ctatctaaaa cagggatgtt
     1621 gaatggttct ggggagctca gctcttctgg acagctagaa gatggcggct cagaggaata
     1681 tcgacctttc tgttgtggag actgtggccg tacctaccgt catgcaggta gtctcatcaa
     1741 ccatcgaaaa agccaccaaa caggtatcta cccctgttcc atttgttcca agcagctatt
     1801 caatgcagct gctctgaaaa accatattcg tgctcatcat agaccccggc aaggagctgg
     1861 ggaaggtggt cagtcatcag tgtcctcaac tgctcttacg tcagccgaga atactccaaa
     1921 agtggacgag gtccccactg ccagcctgga ccatcgtccc tataagtgta atgagtgtgg
     1981 tcgggcttac cgccacagag ggagcctggt gaaccaccgc cacagccacc ggacaggaga
     2041 gtaccagtgt tcactttgtc ctcgaaaata ccccaacctt atggctctgc gcaaccatgt
     2101 gcgggtacat tgcaaggcta cacgccgaag tacagatcca gggactgaag gttcacccag
     2161 ccctgtcaag aaagaacaac atgatccagt gggaatggaa gcagcattcc acggagatga
     2221 ggaacatgca tgcaaacgtg aagaagaggc caccagtaac ccctcaatgg cagataggac
     2281 agtgccacag gtgtgtagca tttgtggaat gttgtttgaa gatctcaaaa gtctcgaaca
     2341 tcatagcgtg acccacaggg aaggagaaaa aagcaggaca gacagcacgg tgtcaccaac
     2401 tagaacattt gcttgccaag actgtggcaa gagctatcgc cactcaggca gccttattaa
     2461 ccataggcag acccatcaga caggagactt cagttgtggg gcctgtgcca agcatttcca
     2521 taccatggct gcgatgaaaa gccatttacg gcgtcacagt cggcagtgga acagaaggcg
     2581 gcagaagcaa gatagtggta caggggaagt agccacgctc ccacctgggg gcgcctggac
     2641 cctgaagctg gaaaacgacg aggacccaga ttcttcccaa gatcctttgg gagaaagtcc
     2701 ttgtgaaact gaagacaacc tggaaaggga tggggactgt ttgcaggctg gatctagagg
     2761 caacgaatgt gtgcttaaaa gggaggaagc ctgttttctg ggtgataaag agggcactga
     2821 ggaaggacta gaagagagag aggcctgttt ccttgacgac ctaggcaccc caggtgatga
     2881 gtgcaatgaa actggcttct gtggtggcct ccctgggatg gacagtgacc ggaagagggg
     2941 catctgccac tctgactcct cctcccaccc tgctgacgct gacactgtct ggaaggccgc
     3001 agccactcac acctgttctg actgtggaga ttctttctcc catgctgctg gcctgttgag
     3061 ccataggtcc tgccaccctc caggcatcta tcaatgctct ctctgtccaa aggaatttga
     3121 ttctctgcct gcccttcgaa gtcacttcca gacccatcgg ccaggagagg tagcctcagc
     3181 acagcccttc ctctgctgcc tgtgcggtat gatctttcct gggaggactg gctacaggcg
     3241 tcatctgcgc caggctcatg gagcttctgc catgactgag ggctcagaag aagaggagga
     3301 aggcacagca gaaacagcct ctacccatag tcctcccctg caactctcag aagcagagct
     3361 gctgaatcaa ctgcagcgtg aggtggaagc tctagatgga gcaggttatg gtcatatttg
     3421 tggttgctgt ggtcagacct atgatgacct ggggagcctg gagcgtcacc accaaagtca
     3481 aagttctagc aataggacag agaatgttcc tagccatttg gaaggagcag gtgatgcaac
     3541 agaaatggtt gcagatcatg gctttgaggg cacagtgacc tccgtctcag aagaaggtgg
     3601 ggacataaag tctgaagagg gagtaggtgg cacagttgca gacagccttt gcatgcaggc
     3661 tggtgaaagc tttctggagt cccaccctcg ccctttccaa tgtaaccagt gtggcaagac
     3721 ctatcgccac ggaggcagct tggtaaacca ccgaaagatc caccagacag gtgatttcat
     3781 ctgtcctgtc tgttcccgct gctaccccaa tctggctgcc taccggaatc atctgcggaa
     3841 tcaccctcgc tgcaaaggct cagagcccca aatggggccc atctcagaag caggaggctg
     3901 cagtgagccc cagaatgcag cagaggcagg gcaggagcag gctgtcatag ggcaactcca
     3961 ggaagagctt aaagtggagc ccttggagga gctggcaggt gtcaaagaag aagtgtggga
     4021 ggggaccgct gtaaaggaag aggagctgga gcaggagttg gagacaggct gtcagactga
     4081 ggtcacctcg gagcggccct ttagctgtga agtgtgtggc cgcacctaca agcatgctgg
     4141 cagccttatc aatcaccggc agagccacca gactggccac tttggctgcc aggcctgctc
     4201 caagggtttc tcaaacctca tgtcactcaa gaaccaccgg cgcatccatg cagaccctcg
     4261 acagttccgc tgcagtgagt gtgggaaagc ctttcgcctg cgaaagcagc tggccaacca
     4321 ccagcgagtc catgctgagc gacgcaggag taggggcacc cagaaactga ctcgtgagga
     4381 ccggcctttc agatgtgggc agtgtggccg gacttaccgc catgctggca gtctcatgaa
     4441 ccaccagtgc aaccctgagg ccagccgtta cagctgccct ttctgtttta agacctattc
     4501 caaccgcaca gccctgaaag accatcagag ggtacattct gatagtcaac agcggcgaca
     4561 gtcaggatgt ccccagaggg cagcagctgt acgttgtacc ctatgtggct gtggcttttc
     4621 tggccaggga tctctagagc agcatctaca ggagcatgag gacaccaaac tagaggtagc
     4681 cagtggccag ggaggccaac atgctacaga aggcagtgag gagaaccttg atgactgggg
     4741 actggagggc aggtcagatg gtactgaggt actgcaggtg gaacatgaaa ccaagaggcc
     4801 tgggggacac agtcagagtc ccagtagccc agcgtgttca ggaggcacag aatccacaca
     4861 gcaggtgggg aaagtagatg ggagtcaagg agacagagga caaatgaacc acaatggtgc
     4921 ctgggttctt caggatcagt taaccaagcc agaaggcaag ttggaagaca ctgtctccag
     4981 gaatccttgt cacctctctg agagccagtc caatggtcct actctaagat acagggatag
     5041 ttggaaaggt gctgacagcg gctctcaact ccaaccagaa agccactgct gcagccagtg
     5101 tggcaaggcc tactgccaac ctgatggcct cttgaacccc agcattaatg ggaaagactg
     5161 tcacatttgt ctgctctgtt ccaaagagtt cttgaatcct gtgaccactg agatccacaa
     5221 ccacactact gcccagcgct ttgcttgtag taattgtagc aaagtgtgtg agtcccacag
     5281 tgaactggcc acacacatga agactcatgc tgttgagcac agtcagatgt caggtcagat
     5341 ggagaagacc agaggtccac aggctgggat ggcagaggtg ggtcctcctg gtccagggaa
     5401 agctcaggag gccccatcag aacttcctgg agacccagag gagaatgggg tgccagctaa
     5461 cggaggacaa ggaatacatt tcccagcagc tgaagacaag gagcgtccct tttgctgtgc
     5521 tcagtgtggg cgttcatacc gccatgccgg tagcctgctg aaccaccaga aggcccacac
     5581 cattggactc tacccctgtt ccctgtgtcc caaacttctg cctaacctgc tgtctctcaa
     5641 gaaccacagt cggacccaca cggaccccaa gcgctacagc tgcaacatct gtggcaaggc
     5701 tttcagaacc gctgcccggc ttcagggcca tggacgggtc catgcacccc aggagggacc
     5761 attcacctgt tctcattgtc ctcgccgctt ccgccaccga atcagctttc tgcgacacca
     5821 gcagcagcac caggaagagt ggccagtgtc gagctcagga gcctcagtgg caccagcagc
     5881 aagcagagag gattcctcta cagcctcgct tccgaacccc tcaccccagt ggcctgcaga
     5941 cctcagtctc tccctctgaa tgacaggtct ccaaagaaca gttgactgaa ggatggggca
     6001 ggcagggaga ggcttgctct cctcattttg ctcaggagtt gcttgggcat ccccatctcc
     6061 tcttcccacg aagaggaccc taatctggct ttttccccca agaagggcat gaggtagtct
     6121 tcatgtctgt gcccatgaag gatgaaggat ctccttccca accctttgtc accatgattt
     6181 tccagggcca gactctgcca aaatgcagag agagccagat tctcacccag ggagaggcag
     6241 atcagagaga accactggtg cgaaagctgc ctgtgacagg ggagcctttt actatagttt
     6301 gtaacttatt ttctaaaatc tattttgtaa caatttaagt tttaaaaaag gaaattgctc
     6361 cccaaacccc ccacccccaa ggaaaaaaaa aacaactttt tttttcacaa ca
//
