LOCUS       NM_173769               3751 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus zinc finger protein 641 (Zfp641), transcript variant
            1, mRNA.
ACCESSION   NM_173769
VERSION     NM_173769.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3751)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3751)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC105982.10.
            
            On Nov 17, 2017 this sequence version replaced NM_173769.3.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK036826.1, AK087530.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164139 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-107               AC105982.10        145950-146056       c
            108-316             AC105982.10        143515-143723       c
            317-408             AC105982.10        142781-142872       c
            409-538             AC105982.10        141066-141195       c
            539-652             AC105982.10        140373-140486       c
            653-3751            AC105982.10        136017-139115       c
FEATURES             Location/Qualifiers
     source          1..3751
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="15"
                     /map="15 54.29 cM"
     gene            1..3751
                     /gene="Zfp641"
                     /gene_synonym="9930016F01Rik; Znf641"
                     /note="zinc finger protein 641"
                     /db_xref="GeneID:239652"
                     /db_xref="MGI:MGI:2442788"
     exon            1..107
                     /gene="Zfp641"
                     /gene_synonym="9930016F01Rik; Znf641"
                     /inference="alignment:Splign:2.1.0"
     exon            108..316
                     /gene="Zfp641"
                     /gene_synonym="9930016F01Rik; Znf641"
                     /inference="alignment:Splign:2.1.0"
     CDS             133..1401
                     /gene="Zfp641"
                     /gene_synonym="9930016F01Rik; Znf641"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="zinc finger protein 641 isoform 1"
                     /protein_id="NP_776130.1"
                     /db_xref="CCDS:CCDS27789.1"
                     /db_xref="GeneID:239652"
                     /db_xref="MGI:MGI:2442788"
                     /translation="MLSEQAVGLGTGWEPMNTQLDAAELQSERGTREEGSWRTAPRPL
                     EHLHCGLEDEPLSLQEKATSVPWVPAVPQEGNTGDWEMAAALLAAGSQGLVTIKDVSL
                     CFSQEEWRSLDPSQTDFYGEYVMQENCGIVVSLRFPIPKLDMLSQQEGGEDQWAPDPQ
                     DVEGRDILKVTYTGDGGEPQGDTPELQVEPPRTLSSVTEDTALWNPGQGPSWESMPRN
                     STGMLLSPRFLQEDTFSRHLHRTDTDSLLKPHTCPQCGKQFVWGSHLARHQQTHTGER
                     PYSCLKCEKSFGRRHHLIRHQKTHLHDKPSRCSECGKSFRCSSHLASHQRVHADSKSC
                     KGQDFGESPAAQHCVPPVPKCHVCTECGKSFGRRHHLVRHWLTHTGEKPFHCPRCEKS
                     FGRKHHLDRHLLTHQGQSPGSSWDRRTAAF"
     exon            317..408
                     /gene="Zfp641"
                     /gene_synonym="9930016F01Rik; Znf641"
                     /inference="alignment:Splign:2.1.0"
     exon            409..538
                     /gene="Zfp641"
                     /gene_synonym="9930016F01Rik; Znf641"
                     /inference="alignment:Splign:2.1.0"
     exon            539..652
                     /gene="Zfp641"
                     /gene_synonym="9930016F01Rik; Znf641"
                     /inference="alignment:Splign:2.1.0"
     exon            653..3751
                     /gene="Zfp641"
                     /gene_synonym="9930016F01Rik; Znf641"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggatttcctg tgcccgcccc gcgccggccc tgtcgcttgt cgcttgctgt gcgggccgcg
       61 ggctcggccg cgccgggcgg gaggtaacgc caaggggccg agccggggtc acagtgtgtg
      121 cttgctgcag acatgctttc ggaacaggct gtaggcctgg gcacgggatg ggagccaatg
      181 aatacacagc tggatgcggc agaactccag tcagaaagag ggacccggga agagggctcg
      241 tggagaacag caccaaggcc gctggagcac cttcactgtg gtcttgaaga cgagccactg
      301 tcccttcagg agaaggcaac ttctgttccc tgggttccgg ccgttcccca ggaggggaac
      361 actggagact gggaaatggc agccgcactt cttgcagccg gatcccaggg cctagtaact
      421 atcaaggatg tgtccttgtg cttctctcag gaggagtggc ggagcctgga cccctcgcag
      481 acagactttt acggagaata tgtcatgcag gaaaactgtg ggatcgtcgt ctctctgagg
      541 tttcccatcc ccaaattgga catgctttct caacaagagg gaggagaaga ccaatgggcc
      601 cctgaccccc aggatgtaga aggaagggac atcctgaagg tcacatatac aggagacgga
      661 ggtgaacccc agggtgatac tcctgagcta caggtggaac ctcccagaac attatccagt
      721 gtgactgaag atactgctct ctggaaccca gggcagggtc caagctggga gtccatgccc
      781 aggaactcca caggaatgct cctaagccca cgcttccttc aggaggacac cttctctcgc
      841 catctacaca gaacagacac agactctctc ttaaaaccac acacgtgccc tcaatgtggg
      901 aaacagtttg tgtggggctc ccaccttgcc cgacatcagc aaacccacac tggagagagg
      961 ccctacagct gcctcaagtg tgagaaaagc tttgggcgaa ggcaccacct gatcaggcac
     1021 cagaaaaccc atctgcatga caagccaagc aggtgctctg agtgcggcaa gagtttccga
     1081 tgcagctcgc acctggccag ccaccagaga gtgcacgcag acagcaagtc ctgcaagggc
     1141 caagactttg gagagagtcc tgcggctcag cactgcgtgc ctcccgtgcc aaagtgccat
     1201 gtgtgcactg aatgtgggaa gagctttggc cggaggcacc acctggtgag acactggctg
     1261 acccacaccg gggagaagcc cttccattgc cctcgctgtg agaagagctt tggccgcaag
     1321 caccacctag ataggcacct gctgacccac cagggacaga gtcctgggag cagctgggac
     1381 agaaggacag ctgccttttg aaatctgtct cttctgtagc catggtcata tctgtcagcc
     1441 ggtgctacca gcagccactg ccagagctgg ccctctcctg taccctgagg gccagagtat
     1501 ttctcaccat ttctgtgaga caacgtggga aaacagagtt ctctgggcaa aattgtggga
     1561 aatggtgcaa agtatgtatg tgtgaggcta ttcatgctga acctactctc aagggaacca
     1621 gcagtgatag ctgaggtcca ttctcactgg ttggggtcca tgtggtacca gttcccaagt
     1681 atttactcta cacagagaga aagtgaaagc ggctgttagt atatcaaggg ctctgagaac
     1741 ccccacagtc aatttctatt catgtaatgt ttcctaaatt tgtttggctc caagatctac
     1801 atcaaattct acagaatggg tgactccatg aagtactggg ctaagatgaa aggaagaaac
     1861 aggaaagaga tggtgatcag gcattcggag cttgagagca aggggccaga cactctcatg
     1921 tgggtctgcc tcctctcttc ctcttctctc ttcccctgtg atcacatgcc tctcactcct
     1981 ccctctgaaa agtatagagt gagctttcac tcccagttca tagtccctca tcctgtacac
     2041 acacacacac acacacacac acacacacac gttcaacatg cacataccac acacaaccac
     2101 atggatgcat atgcacacac atgcacacat gctacacaca cacacacaca cacacacaca
     2161 gctgagagat caggttacag agctaaagag tgaactttgt tacccaagta atcaaggccc
     2221 acacagaagg aaaaactatc cccttgaaca gagctttctc ttgtctgtgt ttttgtgtcc
     2281 gtgtgtgtac gtgtgcaggg tctttgaaga cagcatgctc agtgcgaaat gtacaagtta
     2341 ggttttctag gaactgtgtt ctagggataa gggtagtggg gacggtatga gttttggttt
     2401 tgtttaaacg tattctgagt ggtacaggga gtcgtagtgg gatggtgtaa caatggcttg
     2461 agttgtgtac aaagttttcc ttggtattcc tgggatgtag acagttgtgg atttgtatat
     2521 ctaggtctga atccctggga ggaaattccc ttcccctaca gagacggaaa gggacagtga
     2581 cttgttgttg ttgttgacct cgagcaatgt gatggtggtt cgtgctgcgt ggggttctgt
     2641 cttgttttgt ttcacgtgct aaaactatca ggacaggggt cacagccctg ggagttactc
     2701 ttgtcatcct agtttggctt tcatcaaagg gaagaatggt tgctgagcct ctcattctcc
     2761 caggaaaaag aaccggagga gaaaaggctg ttgcttacct tgccgacctg aggctactga
     2821 gcttcctgaa ggtgttcctg ctgcctctgg aaagggcttc acactttggc tcttgcctct
     2881 gaggttagcg cctgcaccag ggttcagaca gatgtcccca tgcctgtcag ttcacgagtt
     2941 ttcactgttt ttttcttttt ggtgactgtg ttaatacaca tcttacaact taacctctat
     3001 ttaagagaag tttggagtca gggaggaaca gaagcaaaga atgtaagagg gggtgtcttc
     3061 aaggctcacg cacgggctgc tgcttctcct tgagatattt atttctcgaa cactgttaga
     3121 attagccaga gaagacacag gaggaagtga ttttcagcga tctagttaat gagtgctctg
     3181 cttgagaaaa gctgggtgaa tcagagagag ctcttgggcc cttggctcga gaggaatgga
     3241 aacagagtta ttctgctgac taggcatttt ggttaaattg agcagcccag cctccaacct
     3301 ctttctgcag ctgctcagaa cagcctccct tcttgagcta ggatgcattc tcttgcttgt
     3361 gttctgatga atcaagcaaa aaaaaaaaag ggggggggca accttgcaag caggccttag
     3421 tctccgggga ttggagtcgt tctagagtca atgtgatgag aatgagaaaa ctcgcccact
     3481 ttaatacaca tatttacgat aaagtcagct ctgtgcaaag caatcccttc ggaatccggt
     3541 agaaaccagg cagaaaagta gacatttaca actcactcat ttgcatatgc attggacaag
     3601 tggactcaga gcctgccctt ggcatctcca aaggagagga acagttggtg gtggtgtctc
     3661 tctcacatcc ttaatcccag cttcagggag gcagagagag atggtttctg cgttctggat
     3721 gagccaaggc aatgtaatga gatcctgtct g
//
