LOCUS       NM_001362725            4146 bp    mRNA    linear   ROD 05-JUN-2024
DEFINITION  Mus musculus zinc finger protein 62 (Zfp62), transcript variant 3,
            mRNA.
ACCESSION   NM_001362725 XM_006533195
VERSION     NM_001362725.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4146)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   2  (bases 1 to 4146)
  AUTHORS   Choi,M.Y., Romer,A.I., Hu,M., Lepourcelet,M., Mechoor,A.,
            Yesilaltay,A., Krieger,M., Gray,P.A. and Shivdasani,R.A.
  TITLE     A dynamic expression survey identifies transcription factors
            relevant in mouse digestive tract development
  JOURNAL   Development 133 (20), 4119-4129 (2006)
   PUBMED   16971476
REFERENCE   3  (bases 1 to 4146)
  AUTHORS   Hunt,C.R., Parsian,A.J. and Kozak,C.A.
  TITLE     Genetic mapping of mouse heat shock protein genes Hsc4a to
            chromosome 11 and Hsc74 to chromosome 18 and two Hsc74 pseudogenes
            to chromosomes X and 8
  JOURNAL   Genomics 56 (3), 358-360 (1999)
   PUBMED   10087208
REFERENCE   4  (bases 1 to 4146)
  AUTHORS   Agata,Y., Matsuda,E. and Shimizu,A.
  TITLE     Rapid and efficient cloning of cDNAs encoding Kruppel-like zinc
            finger proteins by degenerate PCR
  JOURNAL   Gene 213 (1-2), 55-64 (1998)
   PUBMED   9630514
REFERENCE   5  (bases 1 to 4146)
  AUTHORS   Polimeni,M., Giorgi,S., De Gregorio,L., Dragani,T.A., Molinaro,M.,
            Cossu,G. and Bouche,M.
  TITLE     Differentiation dependent expression in muscle cells of ZT3, a
            novel zinc finger factor differentially expressed in embryonic and
            adult tissues
  JOURNAL   Mech Dev 54 (1), 107-117 (1996)
   PUBMED   8808410
REFERENCE   6  (bases 1 to 4146)
  AUTHORS   Danciger,M., Brady,J., Adamson,M.C., Farber,D.B., Piatigorsky,J.
            and Kozak,C.A.
  TITLE     Chromosomal localization of the genes for five zinc finger proteins
            expressed in mouse lens
  JOURNAL   Genomics 28 (1), 39-43 (1995)
   PUBMED   7590745
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL606829.13 and BE635021.1.
            
            On Apr 26, 2018 this sequence version replaced XM_006533195.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK088060.1, AK157730.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849385, SAMN01164131
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-251               AL606829.13        51951-52201
            252-333             AL606829.13        61354-61435
            334-386             AL606829.13        62249-62301
            387-4138            AL606829.13        63723-67474
            4139-4146           BE635021.1         1-8                 c
FEATURES             Location/Qualifiers
     source          1..4146
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 29.23 cM"
     gene            1..4146
                     /gene="Zfp62"
                     /note="zinc finger protein 62"
                     /db_xref="GeneID:22720"
                     /db_xref="MGI:MGI:99662"
     exon            1..251
                     /gene="Zfp62"
                     /inference="alignment:Splign:2.1.0"
     exon            252..333
                     /gene="Zfp62"
                     /inference="alignment:Splign:2.1.0"
     exon            334..386
                     /gene="Zfp62"
                     /inference="alignment:Splign:2.1.0"
     CDS             386..3130
                     /gene="Zfp62"
                     /note="isoform 1 is encoded by transcript variant 3; ZT3"
                     /codon_start=1
                     /product="zinc finger protein 62 isoform 1"
                     /protein_id="NP_001349654.1"
                     /db_xref="GeneID:22720"
                     /db_xref="MGI:MGI:99662"
                     /translation="MSYLKTTMEDEESSKKNENDSNADSQCPSVGFFHKDHMQKSKTG
                     DTCDLFPKWKILKEGKSSIREMIDTHTNAANIKLEQDDETSEKSFYPSTNTMHQTIPT
                     EPNCTKQGEHTENINGNVHPAHIADKKLHKCDECGKSFKYNSRLVQHKIMHTGEKRYE
                     CDDCRGTFRSSSSLRVHKRIHTGEKPYKCDECGKAYMSYSSLINHKSTHSGEKNCKCD
                     ECGKSFNYSSVLDQHKRIHTGEKPYECGECGKAFRNSSGLRVHKRIHTGEKPYECDTC
                     GKTFSNSSGLRVHKRIHTGEKPYECDECGKAFITCRTLLNHKSIHFGDKPYKCDECEK
                     SFNYSSLLIQHKVIHTGEKPYECDECGKAFRNSSGLIVHKRIHTGEKPYKCDICGKAF
                     SYSSGLAVHKSIHPGKKAHECKDCGKSFSYNSLLLQHKTIHTGERPYVCDVCGKTFRN
                     NSGLKVHRRLHTGEKPYKCDVCGKAYISRSSLKNHKGIHMGEKPYKCSYCEKSFNYSS
                     ALEQHKRIHTREKPFGCDECGKAFRNNSGLKVHKRIHTGERPYKCEECGKAYISLSSL
                     INHKSVHPGEKPFKCDECEKAFITYRTLLNHKKIHLGEKPYKCDVCEKSFNYTSLLSQ
                     HKRVHTREKPFECDRCEKVFRNNSSLKVHKRIHTGEKPYECDICGKAYISHSSLINHK
                     STHPGKTSYTCDECGKAFFSSRTLISHKRVHLGEKPFKCVECGKSFSYSSLLSQHKRI
                     HTGEKPYVCDWCGKAFRNSSGLTVHKRIHTGEKPYGCDECEKAYISHSSLINHKSVHR
                     GKQPYNCECGKSFNYRSVLDQHKRIHTGKKPYRCNDCGKAFNIRSNLTKHKRIHTGEE
                     SLNMANMESHSGTFQKMIYYEGGNSLDGTRMQMPVWEAEHAKSQRNQIEEKLYEYNNF
                     "
     exon            387..4139
                     /gene="Zfp62"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4088..4093
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp62"
                     /note="hexamer: AATAAA"
     polyA_site      4108
                     /gene="Zfp62"
                     /note="major polyA site"
     polyA_site      4137
                     /gene="Zfp62"
ORIGIN      
        1 gaattgcaat aaaagtccaa gacaactaga acccccttcc tctccgggca gaccagccgg
       61 gattaggagg ccagcagagc acccacaaac tgcgggtcac gtgcgcgatc agagcccgac
      121 catcgagtca gtcctccagc ttcccagagc ggcctcggaa gtgcccctgc ggctcgggtc
      181 tttccggcca ggcagtccgc gcttttgtcc cgccggcggc cgggctcccg cggtgccgcc
      241 acagccagta cgaagttgaa atggaaggtc taaaattgaa aagtaaatgg atggaaaatc
      301 tgatatatgt ggacatggca gagtatagat aaggtgaaga aactgctgta caaagaagtt
      361 aaatagctat cccaaaggtc atataatgtc atatttgaag acaaccatgg aggatgagga
      421 gtcgtctaaa aagaatgaaa atgattcaaa tgcagactct cagtgcccaa gtgtgggatt
      481 ttttcataag gatcatatgc agaaatctaa gaccggtgac acttgtgact tgtttcctaa
      541 atggaaaata ctgaaggaag gcaaaagtag tatcagagaa atgattgaca cacatacaaa
      601 cgcagcaaat ataaaactag agcaggatga tgagacatct gagaaaagtt tctacccaag
      661 tacaaataca atgcaccaga ctatccccac agaaccaaat tgtactaaac aaggtgagca
      721 cacagagaac attaatggaa acgtacaccc tgctcatatt gctgataaga aattacataa
      781 gtgtgatgag tgtggaaaat ccttcaaata caattctcgt cttgttcaac ataaaattat
      841 gcacactgga gaaaagcgct acgagtgtga tgactgtagg gggacttttc ggagtagctc
      901 cagtcttcga gtccacaagc gcatccatac tggggaaaag ccctataagt gtgatgagtg
      961 tggcaaagcc tacatgtcct actctagcct tataaaccac aaaagcactc attctgggga
     1021 gaagaactgc aaatgtgacg aatgtggaaa atccttcaat tatagttctg ttctggacca
     1081 gcataaaagg atccacaccg gagagaagcc ctatgaatgt ggtgagtgtg gaaaggcctt
     1141 cagaaacagt tctggtttga gagtccacaa aaggatccac acaggggaga agccctatga
     1201 atgtgatacc tgtgggaaaa ccttcagtaa tagttctggc ctgagggtcc acaaaaggat
     1261 ccatacaggt gagaaaccct atgaatgtga tgaatgtggg aaggcattca ttacttgcag
     1321 aacacttcta aatcataaaa gcatccactt tggtgataaa ccttataaat gtgatgagtg
     1381 tgaaaaatct tttaattaca gctctctcct cattcagcat aaagtcatcc acactggtga
     1441 gaaaccttat gaatgtgatg aatgtgggaa ggccttcagg aacagctcag gccttatagt
     1501 gcataaaagg atccacacag gagagaaacc ttacaagtgt gatatctgtg gcaaagcatt
     1561 cagctatagt tcaggccttg cagtccataa aagcattcat cctggaaaga aagcccatga
     1621 atgtaaagac tgtggcaagt cctttagtta taactcactt cttcttcagc ataagaccat
     1681 tcatactgga gaaagacctt atgtatgtga tgtgtgtggc aaaacgttca ggaacaattc
     1741 aggtctcaaa gttcatcgga gactccatac tggggaaaaa ccatataagt gtgatgtatg
     1801 tgggaaggcc tatatctcac gctcaagcct taaaaatcac aaaggaatcc acatggggga
     1861 gaagccctat aaatgcagct attgtgagaa atctttcaac tacagttctg cccttgaaca
     1921 acataaaagg attcatacaa gggagaagcc ctttgggtgt gatgagtgtg gaaaagcctt
     1981 cagaaacaat tcaggcctta aagtacataa gcgaattcac acaggggaga gaccttacaa
     2041 atgtgaagaa tgtggaaaag cctacatctc actctcaagc cttataaatc ataaaagtgt
     2101 acaccctggg gaaaagccct ttaagtgtga tgagtgtgag aaagccttca tcacatacag
     2161 aacacttcta aaccacaaaa aaattcatct tggagaaaag ccctataaat gcgatgtgtg
     2221 tgagaaatct tttaactaca cctcactcct ttctcaacac aaaagagttc atactagaga
     2281 gaaacccttt gaatgtgaca ggtgtgagaa ggtcttcaga aacaactcaa gccttaaagt
     2341 gcataaaaga atacacactg gggagaagcc ctatgagtgt gacatatgtg gaaaagccta
     2401 catctcacac tcaagcctta ttaaccataa aagtacacac cctggcaaga cgtcctatac
     2461 atgtgatgaa tgcggaaaag catttttctc aagcagaact cttataagcc ataagagagt
     2521 ccatcttggg gaaaagccct tcaagtgtgt tgagtgtggg aagtcgttca gctacagctc
     2581 acttctttcc caacacaaga ggatccacac aggggagaaa ccttatgtat gtgattggtg
     2641 tgggaaggca ttcaggaaca gctcaggcct cacagtacat aaaaggatcc acacaggaga
     2701 gaaaccctat gggtgtgatg aatgtgaaaa ggcatacatt tcacactcaa gtcttattaa
     2761 tcataaaagt gtccaccgtg gaaagcagcc ctataattgt gagtgtggga aatctttcaa
     2821 ttacagatct gtccttgacc aacataaaag aatccacact ggaaaaaagc catatcgatg
     2881 taatgattgt gggaaggcat ttaatatcag gtcaaacctt accaagcaca aaagaatcca
     2941 tacaggagag gaatctttaa atatggcaaa tatggaaagt catagtggca cattccagaa
     3001 gatgatctac tatgagggag ggaattctct ggatgggacc agaatgcaga tgcctgtgtg
     3061 ggaggcagag catgccaagt ctcaaagaaa tcaaatagaa gaaaaacttt atgaatataa
     3121 caatttctga ggtccttagt catggtttat aattttcata gtatgagtga aagaaagaat
     3181 tctaagtgct catgaacaat tctatgtgat tcagttatag caagaacagt tttagtgtca
     3241 aaatagtcga acactttagg actataaaat accactggat ttaaagcctt taaaagtggc
     3301 ggaacattta aaaaatataa tctggacata aaacataaag ataagggtct ttagttagaa
     3361 atcattcact acaaagatcc tatttggata aataagtgaa taagaatgta taaagttggt
     3421 ataattttga gctctatact tcagtcagtg gaaaaaagat ccaagaaggg cctccaacag
     3481 gcaaattcag ggagaggatg gtttcaggga atatcagttt attagtgggt catgaattat
     3541 agacttaaca gtaatggttt gtggtaggaa gatcacaact tctgaaacac tttggatgtc
     3601 ctaggaaaag aaaaggcata atctgtgaca taatcacttc aaatgcatat tagttgaaat
     3661 atactattaa ttgaactggt aagactaaag tttcaaatga actcccttaa tagataatat
     3721 atatggtaaa tgaaaacctg gaaggtgaca ttcacatata ctgaaagaat ggaaaggatt
     3781 ttagtatctt cagttaagta atggaacaca tcttcaacat gaatttgcac cttacagaaa
     3841 actttcaggg aatcctatga ataaaaaaaa aatgtttcaa aggatggctt tttattacaa
     3901 gagctaaata agtaccagta attaagaaga aattcatgtt ttaaaaacaa tactttgttt
     3961 cagaaagcat tgtaaaaatg ttatgtacga catacatgtg tatattgtct gtagtaaaat
     4021 atgaatatgt tcaaaactca cttggccata aaggccaaat agttatggca agataagggg
     4081 taaaaacaat aaatgcctca aatgtaaata ggctgtgact tgttttagat ggacaaataa
     4141 aaaaaa
//
