LOCUS       NM_175480               4902 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus zinc finger protein 612 (Zfp612), mRNA.
ACCESSION   NM_175480
VERSION     NM_175480.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4902)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 4902)
  AUTHORS   Wiese,C.B., Ireland,S., Fleming,N.L., Yu,J., Valerius,M.T.,
            Georgas,K., Chiu,H.S., Brennan,J., Armstrong,J., Little,M.H.,
            McMahon,A.P. and Southard-Smith,E.M.
  TITLE     A genome-wide screen to identify transcription factors expressed in
            pelvic Ganglia of the lower urinary tract
  JOURNAL   Front Neurosci 6, 130 (2012)
   PUBMED   22988430
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 4902)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   4  (bases 1 to 4902)
  AUTHORS   Takeda,K., Ho,V.C., Takeda,H., Duan,L.J., Nagy,A. and Fong,G.H.
  TITLE     Placental but not heart defects are associated with elevated
            hypoxia-inducible factor alpha levels in mice lacking prolyl
            hydroxylase domain protein 2
  JOURNAL   Mol Cell Biol 26 (22), 8336-8346 (2006)
   PUBMED   16966370
REFERENCE   5  (bases 1 to 4902)
  AUTHORS   Mager,J., Schultz,R.M., Brunk,B.P. and Bartolomei,M.S.
  TITLE     Identification of candidate maternal-effect genes through
            comparison of multiple microarray data sets
  JOURNAL   Mamm Genome 17 (9), 941-949 (2006)
   PUBMED   16964442
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY123080.1, AK046220.1, AI603944.1, AK162867.1 and AC124409.5.
            
            On Jan 14, 2010 this sequence version replaced NM_175480.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC048413.1, AK046220.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849379
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-76                BY123080.1         2-77
            77-2058             AK046220.1         2-1983
            2059-2337           AI603944.1         102-380
            2338-4081           AK162867.1         73-1816
            4082-4082           AC124409.5         49438-49438         c
            4083-4889           AK162867.1         1817-2623
            4890-4902           AC124409.5         48618-48630         c
FEATURES             Location/Qualifiers
     source          1..4902
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 57.41 cM"
     gene            1..4902
                     /gene="Zfp612"
                     /gene_synonym="B230354B21Rik"
                     /note="zinc finger protein 612"
                     /db_xref="GeneID:234725"
                     /db_xref="MGI:MGI:2443465"
     exon            1..271
                     /gene="Zfp612"
                     /gene_synonym="B230354B21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            272..336
                     /gene="Zfp612"
                     /gene_synonym="B230354B21Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             313..2331
                     /gene="Zfp612"
                     /gene_synonym="B230354B21Rik"
                     /codon_start=1
                     /product="zinc finger protein 23"
                     /protein_id="NP_780689.3"
                     /db_xref="CCDS:CCDS22660.1"
                     /db_xref="GeneID:234725"
                     /db_xref="MGI:MGI:2443465"
                     /translation="MIPSVWPQKSVTFEDVAVYFTQTEWDGLSPGQRALYRDVMLENY
                     RNLASVGFPLLKPAVISQLEERKDLENLFQLATGTDSQGLWTECTAVQSGNNLTKEVH
                     EEEKSTLFELQKDFSQETNFSKTYILGQQQEIRSAGSERGSASATDGRAKASSVEGCL
                     FSQTPQLSQDHTSSTGELYSDTKLSKSERITTEERPLKPRELAEASQGSPQVNQLPEI
                     CDVEKPYQCAECGKAFSVKAKFVWHQRLHNGEKPFKCVECGKCFSYSSHYITHQTIHS
                     GEKPYQCKVCGKAFSVNGSLVRHQRIHTGEKPYQCKDCGAGFGCSSAYITHQRTHTGE
                     KPYECSDCGKAFNVNAKLIQHQRIHTGEKPYECDVCGKGFRCSTQLRQHQSIHTGEKP
                     HRCSECGKGFTKNAKLIQHQRVHTGEKPYACSDCGKTFSAKGKLIQHQRIHTGERPYE
                     CSECGKSFRCNSQLRQHLRIHTGEKPYKCSECGKAFNVNAKLMQHRRTHTGEKPFECK
                     ECGKCFTSKRNLLDHQRAHTGEKPYQCSECGKAFSINAKLTRHQQIHTREKPFKCMEC
                     EKAFSCSSDYIVHQRIHTGEKPFQCGECGKAFHVNAHLIRHQRSHTGEKPFRCTECGK
                     GFSLSSDCIIHQTVHTWKKPYVCNVCGKTFRFSFQLSQHQDVHNEDKS"
     exon            337..463
                     /gene="Zfp612"
                     /gene_synonym="B230354B21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            464..571
                     /gene="Zfp612"
                     /gene_synonym="B230354B21Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            572..4902
                     /gene="Zfp612"
                     /gene_synonym="B230354B21Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3138..3143
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp612"
                     /gene_synonym="B230354B21Rik"
                     /note="hexamer: AACAAA"
     polyA_site      3163
                     /gene="Zfp612"
                     /gene_synonym="B230354B21Rik"
     regulatory      4871..4876
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp612"
                     /gene_synonym="B230354B21Rik"
                     /note="hexamer: AATAAA"
     polyA_site      4891
                     /gene="Zfp612"
                     /gene_synonym="B230354B21Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggaccgtgct gcgcaggtga gtgcggaccc attgcggttc gcggtgtgtc ttggcggaca
       61 gcacgcaggg gctcccgcag ccagcctcgc gggccaccaa gtctccgtgt ccacagcggt
      121 gacgcttgag tggcgaccat tgtcagaccc agaaaactca gcaggtggcg gatcggggaa
      181 gctgtgtcac ttcacagagg ggtagctgcg tgcgggggcg aagcggctcg aggtgacatc
      241 gcaggtctct tgacccgccg cggccctgca gctccagtcc ttccttgaga gggagaccag
      301 gtgacagcag ccatgatccc atcggtttgg ccccagaagt cggtgacctt tgaggacgtg
      361 gctgtgtact tcacccagac ggaatgggat ggtctgtctc ctgggcagag agcgctgtac
      421 agggatgtca tgctggagaa ctataggaac ctggcctctg taggatttcc acttctcaaa
      481 cctgctgtga tctcacagct agaggaacga aaggatctgg aaaacctgtt tcagctggcc
      541 actggaacgg actcccaggg cctctggact gaatgtactg ctgtccagtc cggcaataat
      601 ctgacaaaag aagtgcatga agaagaaaag agtacattat ttgaacttca gaaggacttt
      661 tctcaggaaa caaacttttc aaaaacgtat attttgggcc aacaacagga aatccggtca
      721 gcaggaagtg agagggggag tgccagtgcc accgatggaa gagctaaggc gagctctgtg
      781 gaagggtgtt tgtttagtca gactccacaa ttgtcccagg atcataccag ctccactgga
      841 gagctatatt ctgataccaa acttagtaag agtgaaagaa tcactacaga ggaaagacct
      901 ctgaaaccca gagaattagc agaggcttct caaggcagcc ctcaagttaa tcagcttcca
      961 gagatctgtg atgtggagaa gccctaccag tgtgcagaat gtggcaaagc cttcagtgtt
     1021 aaagccaagt tcgtctggca tcagagactt cataatggag agaaaccttt caaatgtgtg
     1081 gaatgtggga agtgcttcag ctacagttcc cactacatca cacatcagac aatccacagt
     1141 ggagagaagc cttatcagtg taaggtatgc ggcaaggcct tcagtgttaa tggaagtctc
     1201 gttagacacc agaggatcca cacaggagag aagccgtatc agtgcaagga ctgcggggct
     1261 ggcttcggct gcagttctgc gtacattact catcagagaa cccacactgg agagaagcct
     1321 tacgagtgta gtgactgtgg gaaagccttc aatgttaacg caaaactgat tcagcatcaa
     1381 agaattcaca ctggagagaa gccttatgag tgcgatgtgt gcgggaaggg cttccggtgc
     1441 agcacccagc ttaggcagca tcagagtata cacactgggg aaaagccgca tcgctgcagc
     1501 gagtgtggga aaggcttcac taaaaatgca aagctcattc aacatcagcg agtgcacacg
     1561 ggggagaagc cctacgcctg cagtgactgc ggaaagactt tcagtgccaa agggaagctg
     1621 atccagcacc agaggatcca cacgggcgag cggccgtatg aatgcagtga gtgtgggaag
     1681 tctttcaggt gtaactccca gcttcggcag catctgagaa tccatactgg ggagaagcca
     1741 tataagtgca gtgagtgtgg caaggccttc aacgtcaatg cgaagctgat gcagcaccgg
     1801 agaacccaca ccggggagaa gcccttcgaa tgcaaggagt gcgggaaatg ctttacttct
     1861 aaaagaaacc tgctggatca ccagcgagcc cacaccggag aaaagccgta tcaatgtagc
     1921 gagtgtggga aagctttcag tatcaatgcc aagttaacca gacatcagca aatacatacc
     1981 agggagaagc ctttcaagtg tatggaatgc gagaaagcgt tcagctgtag ctctgactat
     2041 attgtgcacc agaggatcca cactggagag aaaccctttc agtgtggcga gtgtggcaaa
     2101 gccttccacg tcaatgctca cttaattaga caccagagaa gccatactgg ggagaaacct
     2161 ttccggtgca cagaatgtgg caagggcttc agccttagtt ctgactgtat tatacatcag
     2221 actgtccata cttggaagaa accctatgta tgtaacgtat gtgggaaaac tttcaggttt
     2281 agcttccaac taagccagca ccaagatgtt cacaatgaag acaaatccta atgaagaaaa
     2341 aaaaaactaa aaaaacaaaa aaaccccaac ccaccaacca aacaaacaaa aaaacacccc
     2401 aaaaacaaca acaacaacaa acccacacag atacacaaaa taataccaac aaacaagcca
     2461 aaaccaaacc aaccaaccaa acctatgttt aataagaaac ggattgtggc tcatcaatta
     2521 ttacttggag gaaaaccatt agagggaaat gattgtggca gtcttcattt ggaaacaatt
     2581 tttctctttt atttttaatc aggatgagca gctggaaaaa tatatcaaaa ataacgtttt
     2641 ttaaaaatgt atatttgttt ttcaagacag ggtttccctg tgtagctttg gctatcctgg
     2701 agctggctgt gtagaccagg ctggcctcca actcagatgc acctgcctct gcctcctgag
     2761 tgctgatgtt aaaggtgtgc atcaccacca cccaactaat aacttgattt atagcagtaa
     2821 ccagtcagga aatataatga aagaaaacat cctattccca gcagcaccac gaaaagtaga
     2881 ttttctagga attttgtggg gctgaagaaa atgagggatt ctcaactgag ggagaccaaa
     2941 ggaaacaaat acaagaaggc ggagagaaat gaatgtattg ctgcttcatt ttgacaacaa
     3001 gaatgcatta cactttcttt aaaaggggga aaagcaaaca ttaaaataaa aattgttcaa
     3061 agaagccttt aaaaacatca gatccaaagt ggagatgaac aagaaggaaa atgttggcaa
     3121 atgaccactc aaaaataaac aaacctgtgt gtttggttgt aaatacttcc aaataagttt
     3181 gagttgtaaa acacagacat acacacacac acaaatggaa agacctttgt aaaatctgtg
     3241 atataaagtg taatatctag tgctcagatt ttaacaaaag ataacttaaa aatcaatagt
     3301 gacattaaca gacagtattc tagagtcaca agagttctaa agaaccccaa ggagtgcaaa
     3361 ttagtgaaga cttgcatgca tgtcacattg agtatatgat atgcttaccc cccaatcctc
     3421 tgcagccctc agtgaatgta gatgctgtat ttgctatcga tgcctgccat acaagcatac
     3481 actatattaa cagcatgtta gagttcctac tttgtattga ctgaactctt caaacatagc
     3541 tacgccctga aggaaggtat cctgctttga ttttgatgct ttgtgaattg ggctccatga
     3601 agatgttgga attcttgaga taccctttga aatctcttac cccctttaag aaaaatgtaa
     3661 gccattagta agagcacttg agctgcccag aagctgagaa acagctgttg tttctctgtt
     3721 gtcaactggt aatagttaag aaaagttttc ttacttaaaa cacctctagt accaaatatt
     3781 catgtttcca caccagttca attgtttgaa gacaccaact ggatgtcctc caatctatat
     3841 caatttagtc tctacccata atatcctgct agtgagatgg gcttagtctg agaagactgt
     3901 ctctccccac cctccccaca ttcagacatt aatgaggagt cctacattac tgatttggct
     3961 acagattgaa ccctctgggt tcagtaattt gctatggtaa ctcaccaaac ataaattgtt
     4021 taaagttacc atttactcta tattgtgaat gtcacaggag cagccagatg aagagatgga
     4081 acaagatcca aagggttccc acgtgaaggt gtgtttgtct ttatagagtt ggagtgcctt
     4141 accctattga gccttgttta gtgcttttat ggagattaca ctgtgtgccc atgattgatg
     4201 aagtccttgg ctgttacata agtttcccct gccagaagtc aacaggggtt gctgaaagtt
     4261 ccaactctgt tagcacatag ttggctcctt tgacaatcag ccctaatcct ggagttagtg
     4321 acactgagtc tagcaacaag tcactttagc ataaacagat ggctgtaaga gaccttagga
     4381 gtaacaaaag gctttataat atttttctgc tggaaacaag agagaccaaa catacttaag
     4441 tcacagacag aaacccattt acttggttca catcccctta tgtctgtctg ggcaatttgg
     4501 ggatttgttt gtctttggtt cagtagttaa gtgggataaa atgaaaatgc agcactctgg
     4561 aagctgtcaa tctaggaaca cacacgaaca ttagacagtg cagaatatta gtgtttttcc
     4621 ataaagcagt tctttccaaa atgtcttcat ttaaaagtat gtaatggcta gtgacatggc
     4681 tcagcaggta aaggcgaagc ccaacctgag tttcaacctc tagagcccac atggtgggaa
     4741 ggacagactg acacacagtt gtcctctggt ctctgtgcat gcatgaaaac aatgtcattc
     4801 ttaaaaacta aaatacctat actgaaatta agcattttga tcatcttgaa gtgtgcaact
     4861 tgtctattca aataaatcta ataaaactgc agaattgctg ag
//
