LOCUS       NM_009561               2347 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus zinc finger protein 61 (Zfp61), mRNA.
ACCESSION   NM_009561 XM_988747
VERSION     NM_009561.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2347)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2347)
  AUTHORS   Wiese,C.B., Ireland,S., Fleming,N.L., Yu,J., Valerius,M.T.,
            Georgas,K., Chiu,H.S., Brennan,J., Armstrong,J., Little,M.H.,
            McMahon,A.P. and Southard-Smith,E.M.
  TITLE     A genome-wide screen to identify transcription factors expressed in
            pelvic Ganglia of the lower urinary tract
  JOURNAL   Front Neurosci 6, 130 (2012)
   PUBMED   22988430
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2347)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   4  (bases 1 to 2347)
  AUTHORS   Danciger,M., Brady,J., Adamson,M.C., Farber,D.B., Piatigorsky,J.
            and Kozak,C.A.
  TITLE     Chromosomal localization of the genes for five zinc finger proteins
            expressed in mouse lens
  JOURNAL   Genomics 28 (1), 39-43 (1995)
   PUBMED   7590745
REFERENCE   5  (bases 1 to 2347)
  AUTHORS   Brady,J.P. and Piatigorsky,J.
  TITLE     A mouse cDNA encoding a protein with zinc-fingers and a KRAB domain
            shows similarity to human profilaggrin
  JOURNAL   Gene 149 (2), 299-304 (1994)
   PUBMED   7959006
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY271078.1, AK149960.1 and BY420227.1.
            
            On Jan 5, 2007 this sequence version replaced NM_009561.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC006618.1, SRR1660811.92809.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164138, SAMN01164140
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-206               BY271078.1         1-206
            207-2342            AK149960.1         2-2137
            2343-2347           BY420227.1         390-394
FEATURES             Location/Qualifiers
     source          1..2347
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 10.27 cM"
     gene            1..2347
                     /gene="Zfp61"
                     /note="zinc finger protein 61"
                     /db_xref="GeneID:22719"
                     /db_xref="MGI:MGI:99663"
     exon            1..357
                     /gene="Zfp61"
                     /inference="alignment:Splign:2.1.0"
     exon            358..459
                     /gene="Zfp61"
                     /inference="alignment:Splign:2.1.0"
     exon            460..625
                     /gene="Zfp61"
                     /inference="alignment:Splign:2.1.0"
     exon            626..671
                     /gene="Zfp61"
                     /inference="alignment:Splign:2.1.0"
     CDS             669..2336
                     /gene="Zfp61"
                     /codon_start=1
                     /product="zinc finger protein 155"
                     /protein_id="NP_033587.2"
                     /db_xref="CCDS:CCDS39829.1"
                     /db_xref="GeneID:22719"
                     /db_xref="MGI:MGI:99663"
                     /translation="MEAVTFKDVAVVFTKEEFRLLDSAQRTLYQDVMVENFRNLLSVE
                     YQLFKRDKPYLEREEKPQMRRAAPRERDSGINGQSARGAVRGRGSPEALPCWQIWQWV
                     TDDLTTSQNSVVNTPQLQGKAPCQSRPRPSAPVSVDENYIKSHTISVPIHSGRPPLPT
                     LRAQGTSLTERQTRKDQYHQGSHRDEAGQRKRDAHPTSWIPRPRSDHRVCKSKGRCSP
                     SDHGRDGVEVVPFDQNGGIHTRQKSSQHREAVTDLSSSDPHQVLDSGGRACACVECGR
                     GSPCGTDGCIHQGGRTGEERKEFGHQRVCTPVKPYTCEQCGKVFTCRSALNVHVKVHT
                     RERPYNCETCGSAFSQASHLQDHQRLHTGEKPFKCDACGKSFSRSSHLRSHQRVHTGE
                     KPYKCGECGKSFICSSNLYIHQRVHTGEKPYKCVDCGKEFSRPSSLQAHQGIHTGEKS
                     YVCTMCGKGYTLNSNLQVHLRVHTGEKPYSCDVCGKGFSRSSQLQSHQRVHTGEKPYK
                     CDVCGKSFGWRSNLIIHHRIHSSGKPYKSKRDDKNIKESTQEKCSIK"
     exon            672..798
                     /gene="Zfp61"
                     /inference="alignment:Splign:2.1.0"
     exon            799..888
                     /gene="Zfp61"
                     /inference="alignment:Splign:2.1.0"
     exon            889..2347
                     /gene="Zfp61"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2327..2332
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp61"
                     /note="hexamer: TATAAA"
     polyA_site      2346
                     /gene="Zfp61"
                     /note="major polyA site"
ORIGIN      
        1 taaggcagac atcctccaat gtaaagacgt tgctgtccaa gactttctta gggagtatgg
       61 gaaatgaaaa acaacaggga aatccaatac gggaggatgg tgctcctccc ctagcttcgg
      121 gaccggccac ccgcgcctct gcatcctcac ttccgttacc actgagggag ccgagcgtca
      181 cgcacggttt ctccacgcgg aattctggga actcgtcggc ttcaggctag cctgtagcca
      241 tctgtccccc tggatttgag ttattttagc caggaacctc cagaatgacc cgctagatgc
      301 ttctgagatc gacagcaatt gcgtctcggg tgaaaaggaa ggagcgaggt ttgaaagccc
      361 tgacttccca aaaagcagtg ctggaagcca taagtgacta agattggctg acgctggagg
      421 atgtgtgggt cgtacacctg ggattaactt ttattagagg ggtggaaaac gtgagttgcg
      481 gtgtgggtgt ggcgattaga agaccacgct ggggagatgc tgcccatcta ccatcctgtg
      541 tatcctgagg accaaactcg ggcttggtgg taaaagcttt tatccaccaa atcctccctc
      601 gtggacttcg agattgccta attaggtctg cacctcctgg aaggaagggt aaaaaagtga
      661 gcgggcccat ggaggcagta acattcaagg atgtggctgt ggtcttcact aaggaggaat
      721 tcaggctgct ggactccgcc cagaggacgc tgtaccaaga tgtgatggtt gagaattttc
      781 ggaacctgct ctcagtggag tatcaacttt tcaaacgaga taaaccatac ctggaaagag
      841 aagagaagcc tcaaatgagg agggcagccc cgagggagag agattcaggg attaacggtc
      901 agagtgcgag aggagcagtc cgagggagag ggtcacctga agcccttccc tgctggcaaa
      961 tctggcagtg ggtcacggac gacttaacca cgagtcaaaa ctctgtggta aatactcctc
     1021 agctacaggg caaggctccc tgccagtcca ggccaaggcc atctgctccc gtttctgtag
     1081 atgagaacta tataaagagt catacaataa gtgttcccat ccactccgga aggcccccac
     1141 ttcccacttt gagagcccag ggaacttccc tgactgagcg gcagactcgg aaggatcagt
     1201 accaccaagg ctcccacaga gatgaagcgg gtcagaggaa acgggatgct caccctacaa
     1261 gttggattcc acgtccccgc tctgatcaca gagtatgcaa aagtaagggg cggtgtagcc
     1321 ccagtgatca tgggagagac ggggtggaag tggtgccatt cgaccagaat ggagggattc
     1381 acactagaca gaaaagctcc caacacagag aagccgttac cgatctctcc agctcggatc
     1441 ctcaccaagt gttagactca ggagggaggg cttgtgcatg tgttgaatgt gggagaggct
     1501 ccccttgtgg cacagatggc tgcattcatc aaggaggtcg cacaggagaa gaacggaagg
     1561 aattcggtca ccagagggtc tgcacgccag tgaaaccgta cacctgtgag cagtgcggaa
     1621 aagtctttac ttgtagatca gcacttaatg tccacgtgaa agtgcacacg agggagagac
     1681 cttacaattg tgagacctgc gggagtgcct tcagccaggc ctcccacctc caggaccacc
     1741 agaggctcca cactggggag aagccgttca aatgcgatgc ctgcggcaag agtttcagtc
     1801 gcagttccca cctgcggtcc caccagaggg tccacacggg agagaaacca tacaagtgcg
     1861 gggagtgtgg gaagagcttc atttgtagct ccaatctcta catccatcag cgagtccaca
     1921 caggagaaaa gccctataaa tgcgtggact gcgggaaaga attcagtcgc ccttcgagtc
     1981 ttcaggccca tcagggcatt cacaccggag agaaatcata cgtttgtact atgtgtggga
     2041 aaggctatac tctgaattca aatctccaag tccacttgag agtccacacg ggggagaagc
     2101 cgtacagttg tgacgtgtgt gggaaaggct tcagtcgctc ttcacagcta cagtcccatc
     2161 agagagtcca cacgggggag aagccttaca agtgtgatgt gtgtggtaag agctttggtt
     2221 ggcggtcaaa tcttataatt catcacagaa tccacagcag tggtaaacct tacaagagca
     2281 agagagatga taaaaacatc aaggagtcca ctcaggaaaa atgttctata aaatagtgct
     2341 tgaaaag
//
