LOCUS       NM_001177546            4248 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus zinc finger protein 600 (Zfp600), transcript variant
            1, mRNA.
ACCESSION   NM_001177546
VERSION     NM_001177546.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4248)
  AUTHORS   Dietrich JE, Panavaite L, Gunther S, Wennekamp S, Groner AC, Pigge
            A, Salvenmoser S, Trono D, Hufnagel L and Hiiragi T.
  TITLE     Venus trap in the mouse embryo reveals distinct molecular dynamics
            underlying specification of first embryonic lineages
  JOURNAL   EMBO Rep 16 (8), 1005-1021 (2015)
   PUBMED   26142281
REFERENCE   2  (bases 1 to 4248)
  AUTHORS   Piao Y, Ko NT, Lim MK and Ko MS.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL606987.11.
            
            On Dec 19, 2013 this sequence version replaced NM_001177546.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript. Both variants 1 and 2 encode the same protein.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CD539901.1, CN676963.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMN00849382
                                           [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-151               AL606987.11        136499-136649       c
            152-245             AL606987.11        135025-135118       c
            246-330             AL606987.11        103180-103264       c
            331-457             AL606987.11        100043-100169       c
            458-4248            AL606987.11        94720-98510         c
FEATURES             Location/Qualifiers
     source          1..4248
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 78.38 cM"
     gene            1..4248
                     /gene="Zfp600"
                     /gene_synonym="Gm13164"
                     /note="zinc finger protein 600"
                     /db_xref="GeneID:667666"
                     /db_xref="MGI:MGI:3705222"
     exon            1..151
                     /gene="Zfp600"
                     /gene_synonym="Gm13164"
                     /inference="alignment:Splign:2.1.0"
     exon            152..245
                     /gene="Zfp600"
                     /gene_synonym="Gm13164"
                     /inference="alignment:Splign:2.1.0"
     exon            246..330
                     /gene="Zfp600"
                     /gene_synonym="Gm13164"
                     /inference="alignment:Splign:2.1.0"
     CDS             256..2469
                     /gene="Zfp600"
                     /gene_synonym="Gm13164"
                     /codon_start=1
                     /product="zinc finger protein 600"
                     /protein_id="NP_001171017.1"
                     /db_xref="CCDS:CCDS51373.1"
                     /db_xref="GeneID:667666"
                     /db_xref="MGI:MGI:3705222"
                     /translation="MFAPHQESGRRTTKRMSASLENTAQCLLTFKDVFLDFSSEEWEC
                     LNFAQRTLYMDVMLENYNNLLFVENHCICGNYEKEKVLEQETQHIVNEHGHNRKKSSK
                     CNEVRNVIHESSESTPYNTNHRDATLQSSNLKRHKTGTTKGVCTYKDCVNCLKGSSII
                     SLNQGTHIEKKEHNRNKNLDEVLVSRQNNSEMNTYTCGEFDKCFTQSDNLQSQQRIYP
                     GKKSYIYSESDKCFTQPSHLSIHHTIHSGEKPYKCSECDKCFTDKCTLRKHQRIHTGE
                     KPYKCSECDKCFTDKCTLRKHQRIHTGEKPYKCNECDKCFTDKGSLRVHQRIHTGEKP
                     YKCSECDKCFTQPSHLSIHRRIHSGEKPYKCSECDKCFTDKCTLRKHQRIHTGEKPYK
                     CSECDKCFTEKFTLRKHQRIHTGEKPYKCNECDKCFTDKGSLRVHQRIHTGEKPYKCS
                     ECDKCFTKPSHLSIHRRIHSGEKPYKCSECDKCFTQPSPLSIHRRIHSGEKPYKCSEC
                     DKCFTDKGSLRVHQRIHIGEKPYKCSECDKCFTQPSHLSIHCRIHSGEKPYKCSECDK
                     CFTDKSSLRVHQRIHTGEKPYQCSECDKCFTDKGSLRVHHRIHAGEKPYKCSECGKCF
                     TDKGYLRVHYRIHAGEKPYKCSECDKCFTHKGSLRVHHRIHTGEKPYKCSECDKCFTR
                     KSHLSIHQRIHTGEKLYKCNECDKCFSDKHSLRRHQRIHTGETPYKCNECDKCFT"
     exon            331..457
                     /gene="Zfp600"
                     /gene_synonym="Gm13164"
                     /inference="alignment:Splign:2.1.0"
     exon            458..4248
                     /gene="Zfp600"
                     /gene_synonym="Gm13164"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atcattttcg atgtatctcg gctgcctcgt ggtcaggaag ccatggaagg agactagtgc
       61 ctagtatttg cggaacctga aaacttcctt aagctgcagt tgctgtgctg gcctcctagg
      121 acattcagca gctggtcctg tcgccttcca ggtctcccta tgctcagtca actctccata
      181 actgtaaatc aacactaaga gcactagaag gttaaaggtc aaggagactc tcacaaagga
      241 tccagaagaa cttgaatgtt tgctcctcac caagaatctg ggagaagaac aactaaaaga
      301 atgagtgctt ctctggaaaa cactgcacag tgtctattaa ccttcaagga cgtgtttttg
      361 gacttctcat cggaggaatg ggaatgtctc aattttgctc agaggacatt gtacatggat
      421 gtgatgttgg agaattacaa caatctgttg tttgtggaaa atcactgcat atgtggaaac
      481 tatgagaagg agaaggtctt ggaacaagaa acacagcaca ttgtcaatga gcatgggcat
      541 aaccgaaaga agtcttctaa atgtaatgag gttagaaatg tgatccatga atcctccgaa
      601 agtacacctt ataacactaa ccacagagat gccactctcc aatcctcaaa cctaaaaaga
      661 cataaaactg ggaccactaa aggagtttgc acatataaag actgtgtaaa ctgtttaaag
      721 gggtcttcta tcattagtct caatcaagga acccacatag agaagaaaga acacaacaga
      781 aataaaaatc ttgatgaggt tttggtttct agacaaaaca atagtgaaat gaacacttac
      841 acttgtggtg aatttgacaa atgctttact cagagtgaca atcttcaaag tcagcagaga
      901 atttatccag gaaagaaatc ttacatatat agtgaaagtg acaaatgctt tacccaacct
      961 tcccatctta gtattcatca tacaattcat tcaggagaga aaccttacaa atgtagtgaa
     1021 tgcgacaaat gctttactga caaatgcact ctgagaaagc atcagagaat tcatacagga
     1081 gagaaacctt acaaatgtag tgaatgcgac aaatgcttta ctgacaaatg cactctgaga
     1141 aagcatcaga gaattcatac aggagagaaa ccttacaaat gtaatgaatg tgacaaatgc
     1201 tttactgaca aaggcagtct gagagttcat cagagaattc atacaggaga gaaaccttac
     1261 aaatgcagtg agtgtgacaa atgctttacc caaccatccc atcttagtat tcatcgtaga
     1321 attcattcag gggagaaacc ttacaaatgt agtgaatgcg acaaatgctt tactgacaaa
     1381 tgcactctga gaaagcatca gagaattcat acaggagaga aaccttacaa atgtagtgaa
     1441 tgcgacaaat gctttactga gaaattcact ctgagaaagc atcagagaat tcatacagga
     1501 gagaaacctt acaaatgtaa tgaatgtgac aaatgcttta ctgacaaagg cagtctgaga
     1561 gttcatcaga gaattcatac aggagagaaa ccttacaaat gcagtgagtg tgacaaatgc
     1621 tttaccaaac catcccatct tagtattcat cgtagaattc attcaggaga gaaaccttac
     1681 aaatgtagtg aatgcgacaa atgctttacc caaccatccc ctctcagtat tcatcgtaga
     1741 attcattcag gagagaaacc ttacaaatgt agtgaatgcg acaaatgctt tactgacaaa
     1801 ggcagtctca gagttcatca gagaattcat ataggagaga aaccgtacaa atgcagtgag
     1861 tgtgacaaat gctttaccca accatcccat cttagtattc attgtagaat tcattcagga
     1921 gagaaacctt acaaatgtag tgaatgcgac aaatgcttta ctgacaaaag cagtctgaga
     1981 gttcatcaga gaatccatac aggagagaaa ccgtaccaat gcagtgagtg tgacaaatgc
     2041 tttactgaca aaggcagtct tagagttcat catagaattc atgcaggaga gaaaccttac
     2101 aaatgtagtg aatgcggcaa atgctttact gacaaaggct atctgagagt tcattataga
     2161 attcatgcag gagagaaacc ttacaaatgt agtgaatgtg acaaatgctt tactcacaaa
     2221 ggctctctga gagttcatca tagaattcat acaggagaga aaccttataa atgcagtgaa
     2281 tgtgacaaat gctttacccg aaaatcacat cttagtattc atcagagaat tcatacagga
     2341 gagaaactgt acaaatgcaa tgaatgcgac aaatgcttta gtgacaaaca cagtctgaga
     2401 aggcatcaga gaattcatac aggagagaca ccttacaaat gtaatgaatg tgacaaatgc
     2461 tttacctgaa aatcacatct tagtattcat cagataattc atacaggaga gaaaccttac
     2521 aaatgtaatg aatgtgacaa atcctttact gaaaatggct gtctgagaat tcatcagaga
     2581 attcatacag gagagaaacc ttacaaatgt aatgaatgtg acaaatgctt tacctgaaaa
     2641 tcacatctta gtattcatca gataattcat acagaagaga aaccttacaa atgtagtgaa
     2701 tgtgacaaat cctttactga aaatggctgt ctgagaattc atcagagaat tcatacagga
     2761 gagaaacctt acaaatgtaa tgaatgtgac aaatgcttta ctgacaaagg cagtctgaga
     2821 gttcatcaga gatttcatac aggagagaaa ccttacaaat gtagtgaatg tgacaaatgt
     2881 tttattcaaa aatgcagtct gataattcat cagagaattc atacaggaga gaaaccttac
     2941 aaatgtagtg aatgtgacaa agctttactg agaaagtcaa tctgagaagg catcagagaa
     3001 ctcatacagg ggagaattct tacaaatgta ttgaatgtga caaatgtttt gcccagaaat
     3061 cctatcttgt ttttaatcac agaaatcata cattaaagaa gccttacaaa tgcagtcaat
     3121 gtgacaaatg attttcccac aaacttagtc tgagaatgca tcagagaatt catacagtag
     3181 agaaaactta caaaaatgca gtgaatgtga taaatgcttt actaataaag gcagactgag
     3241 aattaatcag ataatttata catttaaaaa aacccttaca agtattttgt atgtgataaa
     3301 tgcagtaccc acaacatcag tctgacaaat caacagatat ttcaaacagt agagcaacat
     3361 tataaatgaa atgaatgaga tagtccttta acaagaaata tcatcttaaa attcactgga
     3421 gaattcttcc aaaagggaaa cttttcaaat acattgacgg tttgaatcct ttattttggc
     3481 ctatctctta gaatgtaata gataatttat acaggcaaga atcttaacaa atataatata
     3541 tgctgaaata tctttgactt catttcagtg cagaaaaaat atgtaaaaaa atatttttat
     3601 gggaaaaata gttctcctgg ggaaatgtgg catatgtttt acacgggtaa tattcttttc
     3661 aacagtcagt gctctaaact agagaattat tatgaatctg aaaacttttg aaaaccttca
     3721 tgcaatgttc aaatcttaga taatgtcaac tattatgctg gcagtaactc tgaatatatg
     3781 atagtgaaga aacattttca ttaaactttt acttgttcac cctcaaatat tatatgatga
     3841 agtcaggtgt gaaagccaga agaatatgat gttgtgcaac aattcatgga gatagaaatg
     3901 atccattcca aaaggaaact aaataaagtg tactatcgcc ttcaaaatgt ctaataaaac
     3961 tggcagcatt ttgtatattt aattcaaatg aagaaattga cacagattgt agttgatagt
     4021 gtatttgaca aactgagcca ccaagactgc atgttcttaa tcctataata tgcctacaga
     4081 tgtgaagtgt gctttgagta tccagtattc attattctta tcacgtcaat gtgacaaatg
     4141 atttattggt ttcacgtttc aggatagtga ctgactatga gtcccttatg ctctgtcaac
     4201 atctccttcc tcattgccct gtaaataaag ctgaatattt taacaagg
//
