LOCUS       NM_026900               1119 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus zinc finger protein 580 (Zfp580), mRNA.
ACCESSION   NM_026900 XM_900964 XM_920440
VERSION     NM_026900.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1119)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1119)
  AUTHORS   Hoffmann,C.J., Kuffner,M.T., Koschutzke,L., Lorenz,S., Lips,J.,
            Boehm-Sturm,P., Mueller,S., Koch,S.P., An,J., Fekonja,L.S.,
            Bugaeva,P., Rex,A., Tunnemann,G.L., Endres,M. and Harms,C.
  TITLE     Zfp580 inactivation as a new therapeutic target to enhance recovery
            after stroke in mice
  JOURNAL   J Cereb Blood Flow Metab 43 (8), 1400-1418 (2023)
   PUBMED   37021637
REFERENCE   3  (bases 1 to 1119)
  AUTHORS   Hoffmann,C.J., Kuffner,M.T.C., Lips,J., Lorenz,S., Endres,M. and
            Harms,C.
  TITLE     Zfp580 Regulates Paracrine and Endocrine Igf1 and Igfbp3
            Differently in the Brain and Blood After a Murine Stroke
  JOURNAL   Front Physiol 13, 887180 (2022)
   PUBMED   35557964
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1119)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   5  (bases 1 to 1119)
  AUTHORS   Wiese,C.B., Ireland,S., Fleming,N.L., Yu,J., Valerius,M.T.,
            Georgas,K., Chiu,H.S., Brennan,J., Armstrong,J., Little,M.H.,
            McMahon,A.P. and Southard-Smith,E.M.
  TITLE     A genome-wide screen to identify transcription factors expressed in
            pelvic Ganglia of the lower urinary tract
  JOURNAL   Front Neurosci 6, 130 (2012)
   PUBMED   22988430
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 1119)
  AUTHORS   Bailey,P.J., Klos,J.M., Andersson,E., Karlen,M., Kallstrom,M.,
            Ponjavic,J., Muhr,J., Lenhard,B., Sandelin,A. and Ericson,J.
  TITLE     A global genomic transcriptional code associated with CNS-expressed
            genes
  JOURNAL   Exp Cell Res 312 (16), 3108-3119 (2006)
   PUBMED   16919269
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC162893.6 and BC066001.1.
            
            [WARNING] On Jan 31, 2025 this sequence was replaced by
            NM_026900.2.
            
            On or before Jul 22, 2009 this sequence version replaced
            XM_920440.2, XM_900964.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC066001.1, AK005257.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-52                AC162893.6         18400-18451
            53-1119             BC066001.1         1-1067
FEATURES             Location/Qualifiers
     source          1..1119
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 2.92 cM"
     gene            1..1119
                     /gene="Zfp580"
                     /gene_synonym="1500015O20Rik; Znf580"
                     /note="zinc finger protein 580"
                     /db_xref="GeneID:68992"
                     /db_xref="MGI:MGI:1916242"
     exon            1..183
                     /gene="Zfp580"
                     /gene_synonym="1500015O20Rik; Znf580"
                     /inference="alignment:Splign:2.1.0"
     exon            184..1102
                     /gene="Zfp580"
                     /gene_synonym="1500015O20Rik; Znf580"
                     /inference="alignment:Splign:2.1.0"
     CDS             196..714
                     /gene="Zfp580"
                     /gene_synonym="1500015O20Rik; Znf580"
                     /codon_start=1
                     /product="zinc finger protein 580"
                     /protein_id="NP_081176.1"
                     /db_xref="CCDS:CCDS51982.1"
                     /db_xref="GeneID:68992"
                     /db_xref="MGI:MGI:1916242"
                     /translation="MLLLPPRPPHPRSSSPEVMDPPPPKTPPFPKAEGPSSTSSSVAG
                     PRPPRLGRHLLIDANGVPYTYTVQLEEEPRGPPQREATPGEPGPRKGYSCPECARVFA
                     SPLRLQSHRVSHSDLKPFTCGACGKAFKRSSHLSRHRATHRARAGPPHTCPLCPRRFQ
                     DAAELAQHVRLH"
     regulatory      1083..1088
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp580"
                     /gene_synonym="1500015O20Rik; Znf580"
                     /note="hexamer: AATAAA"
     polyA_site      1102
                     /gene="Zfp580"
                     /gene_synonym="1500015O20Rik; Znf580"
                     /note="major polyA site"
ORIGIN      
        1 gtgctctttc tcagggacgc cgtcgcccct cgcgcccctg cgccccccga cccgcgtccc
       61 cggcgccgcc ggcccggagc tgcccggaag ctcgctccta ccgcggcgct cgtcagggca
      121 agcccgggtc cgtccgggac ctcggccccg ttctcccccg gacccgagag gctgctgcac
      181 cggctgccgc tccagatgct gctgctgccg ccgcggccac cccaccctcg gtcctcctct
      241 ccggaggtca tggacccacc gccccccaag actccccctt ttcccaaggc ggaaggcccc
      301 tcctccactt cttcctcggt ggcggggccg cggccaccgc ggctgggccg ccatctgctc
      361 atcgacgcca acggggtccc ctacacgtac acggtgcagc tggaggagga acctcggggc
      421 ccgccgcagc gcgaggcgac cccgggagag ccaggtcctc gcaagggcta tagctgccca
      481 gagtgcgctc gtgtctttgc gagccctctg cggctgcaga gccaccgtgt gtcgcactcg
      541 gacctcaagc cctttacttg tggtgcttgt ggcaaagctt tcaagcgatc cagccacctg
      601 tcgcggcacc gcgccaccca ccgtgcgcgc gctggtccac ctcacacctg cccgctctgt
      661 ccacgccgct tccaggacgc cgcggagctg gcgcagcacg tgcgcctgca ctgagctcag
      721 ccctgccctc tccggatcac cacacagcgt cactcccaca cataccccag ttctcctgag
      781 gttactgcct taccctaggc ctcagtttcc ccacccatcc ccaaggagaa atatcatttt
      841 atattttctc ccgtctagct gtgtgatgta gaccaaagtt gttgcccctc tgggcctggg
      901 tgtcagttgg aactgggctt cagtccggct gtgctgtgta agcctttgca aacgttacga
      961 cctctcctga gtcttggtgg tctactcttc ccaagtataa ggtcttcgtg gaagacaaaa
     1021 acaccggcac ggtctggatc gcctctgtac ttctaatgcc cacgatccct tattccttgc
     1081 ccaataaaca ttccgcactt caaaaaaaaa aaaaaaaaa
//
