LOCUS       NM_001127188            2240 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus zinc finger protein 534 (Zfp534), mRNA.
ACCESSION   NM_001127188 XR_034420
VERSION     NM_001127188.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2240)
  AUTHORS   Taniwaki T, Haruna K, Nakamura H, Sekimoto T, Oike Y, Imaizumi T,
            Saito F, Muta M, Soejima Y, Utoh A, Nakagata N, Araki M, Yamamura K
            and Araki K.
  TITLE     Characterization of an exchangeable gene trap using pU-17 carrying
            a stop codon-beta geo cassette
  JOURNAL   Dev Growth Differ 47 (3), 163-172 (2005)
   PUBMED   15840001
REFERENCE   2  (bases 1 to 2240)
  AUTHORS   Piao Y, Ko NT, Lim MK and Ko MS.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
REFERENCE   3  (bases 1 to 2240)
  AUTHORS   Araki K, Imaizumi T, Sekimoto T, Yoshinobu K, Yoshimuta J, Akizuki
            M, Miura K, Araki M and Yamamura K.
  TITLE     Exchangeable gene trap using the Cre/mutated lox system
  JOURNAL   Cell Mol Biol (Noisy-le-grand) 45 (5), 737-750 (1999)
   PUBMED   10512203
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CF167429.1 and AL606910.14.
            
            On Jun 4, 2013 this sequence version replaced NM_001127188.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CF167429.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMN00849384,
                                           SAMN01164131 [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-428               CF167429.1         1-428
            429-2240            AL606910.14        97683-99494         c
FEATURES             Location/Qualifiers
     source          1..2240
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 78.53 cM"
     gene            1..2240
                     /gene="Zfp534"
                     /gene_synonym="Gm13159"
                     /note="zinc finger protein 534"
                     /db_xref="GeneID:100503584"
                     /db_xref="MGI:MGI:3650650"
     exon            1..180
                     /gene="Zfp534"
                     /gene_synonym="Gm13159"
                     /inference="alignment:Splign:2.1.0"
     exon            181..284
                     /gene="Zfp534"
                     /gene_synonym="Gm13159"
                     /inference="alignment:Splign:2.1.0"
     CDS             255..2240
                     /gene="Zfp534"
                     /gene_synonym="Gm13159"
                     /note="novel KRAB box domain containing protein"
                     /codon_start=1
                     /product="zinc finger protein 534"
                     /protein_id="NP_001120660.1"
                     /db_xref="CCDS:CCDS57313.1"
                     /db_xref="GeneID:100503584"
                     /db_xref="MGI:MGI:3650650"
                     /translation="MSVCLVNTPQGLLTFKDVALDFSLEEWECLSFAQRSLYMDVMLE
                     NYNNLLFVENHCIRGKNGKVLDQDSQYIVHEHMNIQEKSSKWDKLSNVILESLQCTPY
                     KTNHSSDALQFSTQKRLKPRNTKEVCKYNDSVNSLSLFSTISLNQGINMQKKKHNRNA
                     ELDKIFVSKHKVMVKKDNIAGNPYKCSEFHKYLTQREKLQSQQRIYHGKKPYESSKSD
                     KCFTHQIHLSIHQGIHTEEKIYKCSECDKCFKNKFNLTMHQRIHKGEKPYKCSECGKC
                     FTDKTSLRIHQRIHTGEKPYKCSECGKCFTEKSSLRIHQRIHTGEKPYKCSECGKCFT
                     EKSSLRIHQRIHTGEKPYKCSECDKCFTQQSYLSIHQRIHTGEKPYKCSECDKCFTKQ
                     SNLSIHQRIHTGEKPYKCSECDKCFTQQSHLSIHQRIHTGEKPYKCSECDKCFTQQSY
                     LSIHQRIHAGEKPYKCSECDKCFTTKGNLIIHQRIHTREKPYKCSECGKCFTEKSSLR
                     IHQRIHTGEKPYKCSECDKCFTKQSKLSIHQRIHTGEKPYKCSECEKCFNEKNSLKIH
                     QRIHTGERPYKCSECDKCFTQKSYLNIHQRIHAGEKPYKCSECDKCFTTKGNLIIHQR
                     IHTREKPYKCSECDKCFTQKSQLSIHQKIHTGEKPYK"
     exon            285..411
                     /gene="Zfp534"
                     /gene_synonym="Gm13159"
                     /inference="alignment:Splign:2.1.0"
     exon            412..2240
                     /gene="Zfp534"
                     /gene_synonym="Gm13159"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaggaagtga caggaagttc caccattcca gcattctcga tgtatctcgg ctgcctcatg
       61 gtcaggaagt catggaggga gactagtgcc tagtgtttgc agaacctgaa aacttcctta
      121 agctagagtt gctgtgctgg cctcctagga tattcagcag ctggtcctgt caccttccag
      181 accttgatgt gaaatttcaa gaagaattca aactttgttc ttcactggac cctgggagaa
      241 ggacaacaac aagaatgagt gtgtgtctgg taaatacacc acagggtctg ttaactttca
      301 aggacgtggc cttggacttc tcactggagg aatgggaatg tctcagtttt gctcagaggt
      361 cattgtacat ggatgtgatg ttggagaatt acaacaatct gttgtttgtg gaaaatcatt
      421 gcatacgtgg aaagaatggg aaggtattgg atcaagacag ccagtacatt gtccatgaac
      481 acatgaatat tcaagagaag tcttctaaat gggacaagct tagcaatgtc attcttgaat
      541 ccctccagtg tacaccttac aaaactaatc acagctctga tgctcttcaa ttctcgaccc
      601 aaaaaagact taagcccagg aacactaaag aagtttgcaa atacaatgac tctgtaaaca
      661 gtttaagttt gttttctacc attagtctca atcaaggaat taacatgcag aagaaaaaac
      721 acaaccgaaa tgcagaatta gacaagattt ttgtttctaa acataaagtc atggtgaaaa
      781 aagacaatat tgcagggaac ccttacaaat gtagtgaatt tcacaaatat cttacccaga
      841 gagaaaaact acaaagtcag cagagaattt atcatggaaa gaaaccttac gaaagtagta
      901 aaagtgacaa atgctttacc catcagatcc atcttagtat tcatcaggga attcatacag
      961 aagagaaaat ttacaaatgt agtgaatgtg acaaatgttt taaaaacaaa ttcaatctta
     1021 ctatgcatca gagaattcat aaaggagaga aaccttacaa atgcagtgaa tgtggcaaat
     1081 gctttactga taaaaccagt ctgagaattc atcagagaat tcatacagga gagaaacctt
     1141 acaaatgcag tgaatgtggc aaatgcttta ctgaaaaaag cagtctgaga attcatcaga
     1201 gaattcatac aggagagaaa ccttacaaat gcagtgaatg tggcaaatgc tttactgaaa
     1261 aaagcagtct gagaattcat cagagaattc atacaggaga gaaaccttac aaatgcagtg
     1321 aatgtgacaa atgctttacc caacaatcct atcttagtat tcatcagaga attcatacag
     1381 gagagaaacc ttacaaatgc agtgaatgtg acaaatgctt taccaaacaa tccaatctta
     1441 gtattcatca gagaattcat acaggagaga aaccttacaa atgcagtgaa tgtgacaaat
     1501 gctttaccca acaatcccat cttagtattc atcagagaat tcatacagga gagaaacctt
     1561 acaaatgcag tgaatgtgac aaatgcttta cccaacaatc ctatcttagt attcatcaga
     1621 gaattcatgc aggagagaaa ccttacaaat gcagtgaatg tgacaaatgc tttactacaa
     1681 aaggcaatct gataattcat cagagaattc atacaagaga gaaaccttac aaatgtagtg
     1741 aatgtggcaa atgctttact gaaaaaagca gtctgagaat tcatcagaga attcatacag
     1801 gagagaaacc ttacaaatgc agtgaatgtg acaaatgctt taccaaacaa tccaaactta
     1861 gtattcatca gagaattcat acaggagaga aaccttacaa atgcagtgaa tgtgaaaaat
     1921 gctttaatga aaaaaacagt ctgaaaattc atcagagaat tcatacagga gagagacctt
     1981 acaaatgtag tgaatgtgac aaatgcttta cccaaaaatc ctatcttaat attcatcaga
     2041 gaattcatgc aggagagaaa ccttacaaat gcagtgaatg tgacaaatgc tttactacaa
     2101 aaggcaatct gataattcat cagagaattc atacaagaga gaaaccttac aaatgtagtg
     2161 aatgtgacaa atgctttacc cagaaatccc aacttagtat tcatcagaaa attcatacag
     2221 gagagaaacc ttacaaatag
//
