LOCUS       NM_013843               3079 bp    mRNA    linear   ROD 15-OCT-2021
DEFINITION  Mus musculus zinc finger protein 53 (Zfp53), mRNA.
ACCESSION   NM_013843 XM_487465
VERSION     NM_013843.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3079)
  AUTHORS   Guo G, Huss M, Tong GQ, Wang C, Li Sun L, Clarke ND and Robson P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
REFERENCE   2  (bases 1 to 3079)
  AUTHORS   Yokoyama S, Ito Y, Ueno-Kudoh H, Shimizu H, Uchibe K, Albini S,
            Mitsuoka K, Miyaki S, Kiso M, Nagai A, Hikata T, Osada T, Fukuda N,
            Yamashita S, Harada D, Mezzano V, Kasai M, Puri PL, Hayashizaki Y,
            Okado H, Hashimoto M and Asahara H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   3  (bases 1 to 3079)
  AUTHORS   Agata Y, Matsuda E and Shimizu A.
  TITLE     Two novel Kruppel-associated box-containing zinc-finger proteins,
            KRAZ1 and KRAZ2, repress transcription through functional
            interaction with the corepressor KAP-1 (TIF1beta/KRIP-1)
  JOURNAL   J Biol Chem 274 (23), 16412-16422 (1999)
   PUBMED   10347202
REFERENCE   4  (bases 1 to 3079)
  AUTHORS   Barclay J, King TF, Crossley PH, Barnard RC, Larin Z, Lehrach H and
            Little PF.
  TITLE     Physical analysis of the region deleted in the tw18 allele of the
            mouse tcl-4 complementation group
  JOURNAL   Genomics 36 (1), 39-46 (1996)
   PUBMED   8812414
REFERENCE   5  (bases 1 to 3079)
  AUTHORS   Crossley PH and Little PF.
  TITLE     A cluster of related zinc finger protein genes is deleted in the
            mouse embryonic lethal mutation tw18
  JOURNAL   Proc Natl Acad Sci U S A 88 (18), 7923-7927 (1991)
   PUBMED   1680234
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY741862.1, AK030965.1 and CT010433.6.
            
            On Aug 31, 2006 this sequence version replaced NM_013843.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK030965.1, SRR1660815.73351.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-10                BY741862.1         2-11
            11-2932             AK030965.1         1-2922
            2933-3079           CT010433.6         82994-83140
FEATURES             Location/Qualifiers
     source          1..3079
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 11.4 cM"
     gene            1..3079
                     /gene="Zfp53"
                     /gene_synonym="D030067O06Rik; KRAZ1; zfas8; Zfp-53;
                     Zfp118"
                     /note="zinc finger protein 53"
                     /db_xref="GeneID:24132"
                     /db_xref="MGI:MGI:99200"
     exon            1..278
                     /gene="Zfp53"
                     /gene_synonym="D030067O06Rik; KRAZ1; zfas8; Zfp-53;
                     Zfp118"
                     /inference="alignment:Splign:2.1.0"
     exon            279..369
                     /gene="Zfp53"
                     /gene_synonym="D030067O06Rik; KRAZ1; zfas8; Zfp-53;
                     Zfp118"
                     /inference="alignment:Splign:2.1.0"
     CDS             309..2267
                     /gene="Zfp53"
                     /gene_synonym="D030067O06Rik; KRAZ1; zfas8; Zfp-53;
                     Zfp118"
                     /note="Zinc finger protein 118"
                     /codon_start=1
                     /product="zinc finger protein 53"
                     /protein_id="NP_038871.1"
                     /db_xref="CCDS:CCDS28440.1"
                     /db_xref="GeneID:24132"
                     /db_xref="MGI:MGI:99200"
                     /translation="MEQNKETWKMERQEAVAKDPGPQASYSLFFKEKIKEETQKEMAG
                     SPLIMSQRLLTFGDVAVEFPQEEWECLDSAQRALYIDVMLENYSNLVSVENYCISDTV
                     HQHVKTEKESCQGNELGEMLHEPTNCALYIRRDTIETSNNYRCSKDRDGSVDLLNQDR
                     HKSTHTGEELCKSEDCEKSLSLSSNLTENQRLYAANKLQSQGEYDDDFSSVYSLMQQT
                     IYIGDTPHQCEKCRKCFSTASSLTVHKRIHTGKKPYKCSVCGKSFTQCTNLKTHQRLH
                     TGEKPYKCKECGKSFPQLSALKSHQKIHTGERPYKCKECDKSFAHCSSFRRHQKTHRA
                     EEHCSCPECGKVLHQLSHLRSHYRLHTGEKPYKCNECDRSFTYYASYRRHQKTHSLDK
                     FYKCKECGKSFLELSHLKRHYRIHTGEKPYKCEVCDKSFTVNSTLKTHLKIHTGEKPF
                     KCRECDKSFTKCSHLRRHQSVHTGEKPYRCKECDKSFTECSTLRAHQKIHTGEKPYKC
                     RECDKSFIQRSNLIIHQRVHTGERPYICKECGKSFTKCSTLQIHQKIHTGEKPYKCME
                     CNKSFTQDSHLRTHQRVHTGERPYICKECGKSFTRCSYLRAHQKIHTGEKPYKCKDCD
                     ISFIQISNLRRHQRVHTGEKNTIATIVT"
     exon            370..461
                     /gene="Zfp53"
                     /gene_synonym="D030067O06Rik; KRAZ1; zfas8; Zfp-53;
                     Zfp118"
                     /inference="alignment:Splign:2.1.0"
     exon            462..588
                     /gene="Zfp53"
                     /gene_synonym="D030067O06Rik; KRAZ1; zfas8; Zfp-53;
                     Zfp118"
                     /inference="alignment:Splign:2.1.0"
     exon            589..3079
                     /gene="Zfp53"
                     /gene_synonym="D030067O06Rik; KRAZ1; zfas8; Zfp-53;
                     Zfp118"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagtttagag gagtgaccag cagggatact gagatgcaat gtgtgtgagc ctaaggaatt
       61 gaggctaaat agtcagagcc taaagtgtta agaacgcgtt tccggcctag ggtctgcact
      121 gtgtggagtc gcgtggtgca gacttgcctg cagagcacac ggccggggtc tcgcgggacc
      181 cgtgaacccc caaagctaca ggtgccaggc ggggcgtcct gggagagtca gcagcgccgc
      241 ggcgggaaca gcagcctggc ggccctggaa ccttccaggg ctcactgatc acccagacca
      301 gctcacctat ggagcagaac aaagagacct ggaagatgga gagacaggag gcagtagcta
      361 aggatccagg accacaagcc agctattcat tattcttcaa agagaaaatc aaagaagaga
      421 cccagaaaga aatggctggt tctccattaa tcatgtcaca gcgtctgttg acatttgggg
      481 atgtggctgt ggaattcccc caggaggagt gggaatgcct ggactctgct cagagggctt
      541 tgtacattga tgtgatgttg gagaattaca gtaacctggt ctctgtggag aactactgca
      601 taagtgatac tgtccatcaa catgtgaaga ctgaaaagga gtcttgtcag ggtaatgagc
      661 ttggtgaaat gcttcatgaa cccaccaact gtgcacttta tataagacgt gacactatag
      721 aaacctctaa taactacaga tgctctaagg acagggatgg ctctgttgac ttgttaaatc
      781 aagatagaca taaaagcaca cacactggcg aagaactttg caaatctgaa gactgtgaga
      841 aatctttaag tttgtcttcc aaccttactg aaaatcagag actctatgct gcaaacaaac
      901 tgcaaagtca gggagaatat gatgatgatt tcagctctgt gtacagtctc atgcaacaaa
      961 caatctacat tggagataca ccacaccaat gtgagaaatg caggaaatgc ttcagtaccg
     1021 cttcaagctt aactgtacac aagagaattc atactggaaa gaaaccctac aagtgcagtg
     1081 tttgtggcaa atcctttacc cagtgcacaa atcttaaaac acatcaaaga cttcatactg
     1141 gggagaagcc ttacaaatgc aaagagtgtg gaaaatcatt tcctcagttg tcagcactta
     1201 aaagccatca gaaaattcat actggagaga gaccttacaa atgtaaggag tgtgacaaat
     1261 cctttgccca ctgttccagt ttcaggagac atcagaaaac ccatagggct gaggaacatt
     1321 gtagttgtcc agagtgtggc aaagtcttac atcagctttc acaccttaga agccattaca
     1381 gactccatac tggagagaag ccctacaaat gcaatgagtg tgacagatca tttacctact
     1441 atgcatcata tagaaggcat cagaaaactc attctctaga taaattttac aaatgcaaag
     1501 aatgtggtaa gtcctttctt gaattatcac atcttaaaag gcattataga attcatactg
     1561 gtgaaaagcc ttacaaatgt gaggtgtgtg ataaatcttt tactgttaat tctactctta
     1621 aaacacatct gaaaattcat actggagaga aaccttttaa atgtagggaa tgtgataaat
     1681 cttttaccaa gtgctcacat cttcgaagac atcagagtgt tcatactggt gagaaacctt
     1741 atagatgtaa ggaatgtgac aaatctttta ctgagtgttc aactcttaga gcccatcaga
     1801 aaatccatac tggtgagaaa ccttacaaat gtagagaatg tgacaaatcc tttatccagc
     1861 gttcaaatct tataatacat cagagagttc atacgggaga gagaccttac atatgtaagg
     1921 aatgtggcaa atcttttact aagtgttcaa ctcttcaaat acatcagaaa attcatactg
     1981 gagagaaacc ttacaaatgt atggaatgca acaaatcctt tacccaggac tcacatctta
     2041 gaacacatca gagagttcat actggagaga gaccttacat atgtaaggaa tgtggcaaat
     2101 cttttactcg atgctcatat cttagagcac atcagaaaat tcatactgga gagaaacctt
     2161 acaaatgcaa agactgtgac atatccttta tccagatttc aaatctgaga agacatcaga
     2221 gagttcatac tggagaaaaa aataccattg caactattgt gacatagcat ttatttggtg
     2281 ttccctgctt aaaaatcaca acagtataaa taatagaaac ataaaaataa caggcttttg
     2341 aaagccttta gttaaggttt aaatttaaaa aaaaaataaa agtttatatt aacatgaaat
     2401 tctgtaatta taactgtgga aaaagctttt tatttatttt tttaatgtgt atgtttgcca
     2461 ggcctggaag tattctctgt gcactacatg tatgcctggt gtgggtagaa gccagaagag
     2521 agcatcagat cccctgaagt tggcagtaca cctagttctg tgtagctatt tatatgttgg
     2581 gaattggacc tgttctctgt aagagcaacc agtgctctta accactgact tttctctccc
     2641 atccctggaa agaactataa caaaaatact tatgtaacat ctaaccattc ataataatgc
     2701 caggcaagat ggtgtatgac tttaattgta gcacttagaa gacacagaca agcagatcac
     2761 tgagtctggg ttcatcctgg tctacatagt gactttcagg actgccagga ttatatagac
     2821 cctgtctcaa aaaaattaaa aataaaaata aaaaaatggt aaatatgaat aacatatgat
     2881 aacattagca attagcaaac atgtatgtaa ttaaagtgta tatcacaaag ttcatagttc
     2941 tgagaaacta tgttaaagta tattttatat aattcccatg tctctttgga aattacatct
     3001 cacacaaata ttttgaattg cacaaatgct ttacaaaata gtgctaaaat tgcagagatt
     3061 aaagaaaatt catcatgaa
//
