LOCUS       NM_144515               3164 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus zinc finger protein 52 (Zfp52), mRNA.
ACCESSION   NM_144515
VERSION     NM_144515.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3164)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3164)
  AUTHORS   Wiese,C.B., Ireland,S., Fleming,N.L., Yu,J., Valerius,M.T.,
            Georgas,K., Chiu,H.S., Brennan,J., Armstrong,J., Little,M.H.,
            McMahon,A.P. and Southard-Smith,E.M.
  TITLE     A genome-wide screen to identify transcription factors expressed in
            pelvic Ganglia of the lower urinary tract
  JOURNAL   Front Neurosci 6, 130 (2012)
   PUBMED   22988430
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 3164)
  AUTHORS   Guo,G., Huss,M., Tong,G.Q., Wang,C., Li Sun,L., Clarke,N.D. and
            Robson,P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
REFERENCE   4  (bases 1 to 3164)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   5  (bases 1 to 3164)
  AUTHORS   Choi,M.Y., Romer,A.I., Hu,M., Lepourcelet,M., Mechoor,A.,
            Yesilaltay,A., Krieger,M., Gray,P.A. and Shivdasani,R.A.
  TITLE     A dynamic expression survey identifies transcription factors
            relevant in mouse digestive tract development
  JOURNAL   Development 133 (20), 4119-4129 (2006)
   PUBMED   16971476
REFERENCE   6  (bases 1 to 3164)
  AUTHORS   Barclay,J., King,T.F., Crossley,P.H., Barnard,R.C., Larin,Z.,
            Lehrach,H. and Little,P.F.
  TITLE     Physical analysis of the region deleted in the tw18 allele of the
            mouse tcl-4 complementation group
  JOURNAL   Genomics 36 (1), 39-46 (1996)
   PUBMED   8812414
REFERENCE   7  (bases 1 to 3164)
  AUTHORS   Marine,J.C., Gilbert,D.J., Bellefroid,E.J., Martial,J.A.,
            Ihle,J.N., Copeland,N.G. and Jenkins,N.A.
  TITLE     Chromosomal location of fifteen unique mouse KRAB-containing zinc
            finger loci
  JOURNAL   Mamm Genome 7 (6), 413-416 (1996)
   PUBMED   8662221
REFERENCE   8  (bases 1 to 3164)
  AUTHORS   Bellefroid,E.J., Marine,J.C., Matera,A.G., Bourguignon,C.,
            Desai,T., Healy,K.C., Bray-Ward,P., Martial,J.A., Ihle,J.N. and
            Ward,D.C.
  TITLE     Emergence of the ZNF91 Kruppel-associated box-containing zinc
            finger gene family in the last common ancestor of anthropoidea
  JOURNAL   Proc Natl Acad Sci U S A 92 (23), 10757-10761 (1995)
   PUBMED   7479878
REFERENCE   9  (bases 1 to 3164)
  AUTHORS   Crossley,P.H. and Little,P.F.
  TITLE     A cluster of related zinc finger protein genes is deleted in the
            mouse embryonic lethal mutation tw18
  JOURNAL   Proc Natl Acad Sci U S A 88 (18), 7923-7927 (1991)
   PUBMED   1680234
REFERENCE   10 (bases 1 to 3164)
  AUTHORS   Ihle,J.N., Smith-White,B., Sisson,B., Parker,D., Blair,D.G.,
            Schultz,A., Kozak,C., Lunsford,R.D., Askew,D., Weinstein,Y. et al.
  TITLE     Activation of the c-H-ras proto-oncogene by retrovirus insertion
            and chromosomal rearrangement in a Moloney leukemia virus-induced
            T-cell leukemia
  JOURNAL   J Virol 63 (7), 2959-2966 (1989)
   PUBMED   2542606
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK032299.1 and BY206348.1.
            
            On Jan 18, 2007 this sequence version replaced NM_144515.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK032299.1, SRR1660819.196409.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-103               AK032299.1         2-104
            104-268             BY206348.1         34-198
            269-3164            AK032299.1         270-3165
FEATURES             Location/Qualifiers
     source          1..3164
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 11.4 cM"
     gene            1..3164
                     /gene="Zfp52"
                     /gene_synonym="KRAB11; mszf23-2; mszf24; mszf34; mszf75;
                     zfec29; Zfp-52; Zfp76"
                     /note="zinc finger protein 52"
                     /db_xref="GeneID:22710"
                     /db_xref="MGI:MGI:99199"
     exon            1..295
                     /gene="Zfp52"
                     /gene_synonym="KRAB11; mszf23-2; mszf24; mszf34; mszf75;
                     zfec29; Zfp-52; Zfp76"
                     /inference="alignment:Splign:2.1.0"
     exon            296..393
                     /gene="Zfp52"
                     /gene_synonym="KRAB11; mszf23-2; mszf24; mszf34; mszf75;
                     zfec29; Zfp-52; Zfp76"
                     /inference="alignment:Splign:2.1.0"
     exon            394..484
                     /gene="Zfp52"
                     /gene_synonym="KRAB11; mszf23-2; mszf24; mszf34; mszf75;
                     zfec29; Zfp-52; Zfp76"
                     /inference="alignment:Splign:2.1.0"
     CDS             455..2629
                     /gene="Zfp52"
                     /gene_synonym="KRAB11; mszf23-2; mszf24; mszf34; mszf75;
                     zfec29; Zfp-52; Zfp76"
                     /note="KRAB-zinc finger protein 76"
                     /codon_start=1
                     /product="zinc finger protein 52"
                     /protein_id="NP_653098.2"
                     /db_xref="CCDS:CCDS37464.1"
                     /db_xref="GeneID:22710"
                     /db_xref="MGI:MGI:99199"
                     /translation="MANSPVNTSQGLLTFRDVAVDFSQEEWECLDSAQRALYIDVMVE
                     NYSNLVSVENYCICDTVHQPVRTEKESCPCNELNEMLHEPSNCALYNRSDTTEASNNY
                     RCCNEKDASVDSSNADRHKSMHIGEEDTCQSKDCEKSFNLCSNIRQYQRLNTEKKEHK
                     QDEHDDHFSSLYSLMQETVDMEEKPYQCGHCRKYFSTTSSLSIHQRIHTGEKPYKCNI
                     CGKSFNQWSSLKTDQTLHTAKKPYKCKEGGKLLVQLSALKSHQRRHTGEKPYKCQQCD
                     RSFAHCASLRWHQKIHSPEIHYECKECGKSCFELSHLKRHCRIHTAEKPYRYEVCDTS
                     ITVNSTLKTHHKIHTREKPYRYRECDKSITKCSYLRTYQRVHTGKRPYRCTECDKFFT
                     KHSNLRQHQKIHTGEKPPKCKDCDKSFLRISSVRIRQKIHAGERRYRCKECGRSFTWF
                     SNLRVHQRVHTGERPYRCKECGKSFTTGSNLRVHQKIHTGEKPYKCKDCDISFLWISN
                     LRTHQKIHTGEKPYKCQECNKSFTRCSYLRDHQKIHTGEKLYKCKDCDISFMWISSLR
                     RHQKIHTGEKPYKCRGCEKSFTQCSTLRDHQKIHTGEKPYKCKDCGISFLWISSLRRH
                     QKIHTGEKPYKCKDCDISFLWISNLRTHQKIHTGEKPYKCQECNKSFTRCSYLRVHQR
                     THSGEKLYKCENCDVSFMWISNLRRHQKIHTGGKHSLVNNVT"
     exon            485..611
                     /gene="Zfp52"
                     /gene_synonym="KRAB11; mszf23-2; mszf24; mszf34; mszf75;
                     zfec29; Zfp-52; Zfp76"
                     /inference="alignment:Splign:2.1.0"
     exon            612..3164
                     /gene="Zfp52"
                     /gene_synonym="KRAB11; mszf23-2; mszf24; mszf34; mszf75;
                     zfec29; Zfp-52; Zfp76"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2760..2765
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp52"
                     /gene_synonym="KRAB11; mszf23-2; mszf24; mszf34; mszf75;
                     zfec29; Zfp-52; Zfp76"
                     /note="hexamer: AATAAA"
     polyA_site      2780
                     /gene="Zfp52"
                     /gene_synonym="KRAB11; mszf23-2; mszf24; mszf34; mszf75;
                     zfec29; Zfp-52; Zfp76"
                     /note="major polyA site"
ORIGIN      
        1 cactcgccca gaaatagagg atggaagatg tggtacattg gctgggtgta gaggaagggt
       61 gtagtgtggg tgggattaga agactgaggc cagggaagct aggaagcaag gtgtgttagc
      121 ttgggaagtg ggactaaaaa gtcaaagtct ggagtgtcaa gaatccggta caagactgag
      181 ctggggttgg ggttgagggg tagagcggct gcacagtgtg gaatcgcgtg gtggagacct
      241 gagtatggag gaaacggcgg ggctcgcaga accggaaaac ttacctatac cgcagggctc
      301 actgaacacc cagacctcag acctgctcac ctgtgaaaca taacaaagag ccctagaagg
      361 tggagaggga ggagacagta cctaaggatc cagaccacaa tctggctatt cattgttatt
      421 caaagagaaa atcaaagaag agaaacagga agaaatggcc aattctccag taaacacatc
      481 ccagggtctg ttgacattcc gagatgtggc tgtggacttc tcccaagagg aatgggaatg
      541 cctggactct gctcagaggg ctttgtacat tgatgtgatg gtagagaatt atagcaacct
      601 ggtctctgtg gagaactact gcatatgtga tactgtccat caacctgtga ggactgaaaa
      661 ggagtcttgt ccatgtaatg agctcaacga aatgcttcat gaaccctcca actgtgcact
      721 ttataataga agtgacacta cagaagcctc taacaactac agatgctgta atgagaagga
      781 tgcctctgtt gactcatcaa acgcagatag acacaaaagt atgcacatcg gagaagaaga
      841 cacttgccaa tctaaagact gtgagaaatc tttcaatttg tgttccaaca ttcggcaata
      901 tcaaagactc aacactgaaa agaaagagca caagcaggat gaacatgatg accatttcag
      961 ctctctatat agtctcatgc aagaaacagt tgacatggaa gaaaagccat atcaatgtgg
     1021 gcactgcagg aaatacttca gtaccacctc aagcctcagt atccatcaga gaattcatac
     1081 tggagagaaa ccttacaaat gcaatatttg tggcaaatcc tttaatcagt ggtcaagcct
     1141 taaaacagat caaacactgc atacggcaaa gaaaccatac aaatgcaaag aaggtggaaa
     1201 gttacttgtg cagttatctg cacttaaaag ccatcagaga aggcatactg gagagaagcc
     1261 ttacaaatgt cagcagtgtg acagatcctt tgcccactgt gcatcattaa gatggcatca
     1321 gaaaattcat tctcctgaga tacattatga atgcaaagaa tgtggtaagt cctgttttga
     1381 attatcacat cttaaaaggc attgcagaat ccatactgcc gaaaagcctt acagatatga
     1441 ggtatgtgat acatctatta ctgtgaattc aactcttaaa actcatcata aaattcatac
     1501 cagagagaaa ccttacagat atagggaatg tgacaaatct attaccaagt gctcatatct
     1561 tagaacatat cagagagttc atactggaaa gagaccgtat agatgtacag aatgtgacaa
     1621 attttttact aagcactcaa atcttagaca acatcagaaa attcatactg gagagaaacc
     1681 tcccaagtgc aaagattgtg ataaatcctt tctccggatt tctagtgtta gaatacgtca
     1741 gaaaattcat gctggagaga gacgttatcg atgtaaggaa tgtggcagat cttttacctg
     1801 gttctcaaat cttagagtcc atcagcgagt tcatactgga gagagacctt acagatgtaa
     1861 ggaatgtggc aaatctttta ctacgggctc aaatcttaga gtccatcaga aaattcatac
     1921 tggagagaaa ccttacaaat gcaaagactg tgacatatcc tttctgtgga tttcaaatct
     1981 tagaacacat caaaaaattc atactggtga gaaaccttac aaatgccagg aatgtaacaa
     2041 atctttcaca aggtgctcat atcttagaga ccatcagaaa attcatactg gagagaaact
     2101 ttacaaatgc aaagactgtg acatatcatt tatgtggata tcaagtctta gaagacatca
     2161 gaaaattcat actggagaga aaccttacaa atgtagagga tgtgagaaat cctttactca
     2221 gtgttcaact ctaagagacc atcagaaaat tcatactgga gagaaacctt acaaatgcaa
     2281 agactgtggc atatcctttt tgtggatttc aagtcttaga agacatcaga aaattcacac
     2341 tggagagaaa ccttacaaat gcaaagactg tgacatatcc tttctgtgga tttcgaatct
     2401 tagaacacat cagaaaattc atactggaga gaaaccttac aaatgtcaag aatgtaacaa
     2461 atcttttact aggtgctcct atcttagagt ccatcagaga actcattctg gagagaaact
     2521 ttacaaatgc gaaaactgtg acgtatcctt tatgtggatt tcgaatctga gaagacatca
     2581 gaaaattcat acaggaggaa aacattccct tgtaaataat gtgacataac atatatctgg
     2641 tattctctgc ttgcaaatca aatgagataa gtgattgcaa cataaagata acataactag
     2701 atggttaaag cctttaatga ggattgaaat cttacaaaat gaatcagagt ttatattaaa
     2761 ataaaattct gcaaatgtaa ctgtggggaa agctttttat ttcttttaat atgtatgcct
     2821 ggcctgtaag tatttctgtg tactacatgt atgcctggcg cacgtataag ccaaaagaga
     2881 gcatcagatc ccctgaagtt ggcattatat acagttgtgt gtagctgttt atatgttggg
     2941 aattgaactc ttatcctctg gaattgcagc cagtgctctt aactactgag ccttctctgc
     3001 catccctgag aaaagctata acaaaaacat atagcttatt caacatccaa ccattcataa
     3061 taatgacagg taaaatggta catgccttta atcacagcac acagaagaca gagatcactg
     3121 tgaatccagt tccaggactt cccgaactac atagaccctt tctc
//
