LOCUS       NM_028319               6840 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus zinc finger protein 518A (Zfp518a), mRNA.
ACCESSION   NM_028319 XM_140758 XM_894273 XM_901420 XM_917605 XM_925055
            XM_925057 XM_976746
VERSION     NM_028319.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 6840)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK041506.1, CK618936.1 and AC117253.3.
            
            On or before Mar 20, 2007 this sequence version replaced
            XM_894273.2, XM_901420.2, XM_140758.7, XM_917605.2, XM_925057.2,
            XM_925055.2, XM_976746.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CK618936.1, CF164125.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-45                AK041506.1         2-46
            46-662              CK618936.1         1-617
            663-6840            AC117253.3         28722-34899         c
FEATURES             Location/Qualifiers
     source          1..6840
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="19"
                     /map="19 34.26 cM"
     gene            1..6840
                     /gene="Zfp518a"
                     /gene_synonym="2810401C22Rik; 6330417C12Rik; mKIAA0335;
                     Zfp518; Znf518; Znf518a"
                     /note="zinc finger protein 518A"
                     /db_xref="GeneID:72672"
                     /db_xref="MGI:MGI:1919922"
     exon            1..86
                     /gene="Zfp518a"
                     /gene_synonym="2810401C22Rik; 6330417C12Rik; mKIAA0335;
                     Zfp518; Znf518; Znf518a"
                     /inference="alignment:Splign:2.1.0"
     exon            87..168
                     /gene="Zfp518a"
                     /gene_synonym="2810401C22Rik; 6330417C12Rik; mKIAA0335;
                     Zfp518; Znf518; Znf518a"
                     /inference="alignment:Splign:2.1.0"
     exon            169..313
                     /gene="Zfp518a"
                     /gene_synonym="2810401C22Rik; 6330417C12Rik; mKIAA0335;
                     Zfp518; Znf518; Znf518a"
                     /inference="alignment:Splign:2.1.0"
     exon            314..390
                     /gene="Zfp518a"
                     /gene_synonym="2810401C22Rik; 6330417C12Rik; mKIAA0335;
                     Zfp518; Znf518; Znf518a"
                     /inference="alignment:Splign:2.1.0"
     exon            391..6840
                     /gene="Zfp518a"
                     /gene_synonym="2810401C22Rik; 6330417C12Rik; mKIAA0335;
                     Zfp518; Znf518; Znf518a"
                     /inference="alignment:Splign:2.1.0"
     CDS             522..4958
                     /gene="Zfp518a"
                     /gene_synonym="2810401C22Rik; 6330417C12Rik; mKIAA0335;
                     Zfp518; Znf518; Znf518a"
                     /note="zinc finger protein 518"
                     /codon_start=1
                     /product="zinc finger protein 518A"
                     /protein_id="NP_082595.1"
                     /db_xref="CCDS:CCDS37982.1"
                     /db_xref="GeneID:72672"
                     /db_xref="MGI:MGI:1919922"
                     /translation="MPFEQTQLFCDEKPTILKKLDTRNEIADTIRSVSTSKISETSFQ
                     YVLKDVNICLPKINIPNEILMKHEVEKYRLLFQSKPQTARKSISVKTVSCAEECVLLC
                     KSERAEDETVNMSAKILNFSCSKCQDSTQYSPNDLQKHFEMWHHGELPSFPCEMCSFS
                     ASDFQIFKQHRKTHRNTFVKCDICNSERSYTLLDLTKHFTSKHCVNGNFQCEECRFFT
                     QDVGTFVQHIHRHKEVHYKCGKCHHLCFTKGELQKHLRVHSGTLPFTCHYCSYGAIHK
                     DQLIRHVITLHKEHLYAKEKLERDQYDKRVAKTTTTGLKLILKRYKIGPTKTFWKRKT
                     ITSGNDESIGKNAQAFNIVSKTQTKSEDQSQEQVNGEKGEKQHCENGDKPVESESEKA
                     TVLSTGQYNKADEGASTTSSSVLSAVQGPTVLLVRNNKITIPANYSAKFMGFKMVDGR
                     QHIVIKLLPANKQILPSPVLQSNTEKNSTANLSPQAVANTGFATGLTTKVNDTDFVKA
                     APPACSSPVLARKVISEKEAAFISEKNNTLQMVDDSKSLSSLPTTSTTSVRVTTKVEA
                     RDNVDLWENDSPQSHPDASDTSISSPDKVSLTPKPNAYSSGDMHNYCINYVNSELPAE
                     SSNSFEFSNQGSLPFHNYSKVNNKRRRFSRATLCENLQKESPNKTVTQQSTSDSDTAS
                     PLLRKESSNSDNLFASINPLNGTLKIKTEIEEPYNLEETQNFNEQSLFTNENQNLLNV
                     TEEPKWNDIPSAGSPMMPRITSVFSLQSEQASEFLTPEVNQLLQDTLKPKSDIKEDSN
                     NIPSKNLPFDCDQTLKKSEEVVIKSSKDFQMQDDIPVPSASVGVNVPANDLNSKCNGQ
                     EKQGLSVLQDVRDSEVTTKIPNIITLLKTQSDAIITQQLVKDKLRTTTQNSGPVYVQN
                     PFLTSEQKNPVFVQTPKGFIIPLHVANKPGLHVFSGRPVPLVNTRSVPATLLVNKKPG
                     MLLATNNGKPESVPTVKTENVHSYGTVTKEPCKTPFLKAEHNNSCLTPGLCSSIGNCV
                     NMKTCSENTLPLKGSYIIKTSVNSSVKAVPNILPEQQGPKMNILDTVKQQNENLPKAS
                     LYTLMPDGKQAVFFKCVMPNNTKLLKPKLVQSSTYQHIQPKRPAGAPQKILVKIFNPV
                     LSMSAFNNLSASNSASSFQKEIVPSKPTVHGEQKEPETSRNALPVLVHGLMPANETVH
                     SSTTACPGSSEEPVYISERSETRVLRGKANCAVERNFNKRKTCKNKFAKIKTRIDQDS
                     ETAFVSRNRSCKRKYIDNYQEPPRKKSTLNRKGKERASAEDVQEAFGFSRPRLPKDSS
                     RTLRLFPFSSKQLVKCPRRNQPVVVLNHPDADTPEVERVMKTIAKFNGHVLKVSLSQT
                     TINALLKPVSNTSETTYNDFSKRQKMLKPVNSVKERFVLKLTLKKTSKNNYQIVKTTS
                     EDVLKSQFNCWFCGRVFDNQDVWAGHGQRHLVEATRDWNMLE"
     regulatory      6814..6819
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp518a"
                     /gene_synonym="2810401C22Rik; 6330417C12Rik; mKIAA0335;
                     Zfp518; Znf518; Znf518a"
                     /note="hexamer: ATTAAA"
     polyA_site      6835
                     /gene="Zfp518a"
                     /gene_synonym="2810401C22Rik; 6330417C12Rik; mKIAA0335;
                     Zfp518; Znf518; Znf518a"
                     /note="major polyA site"
ORIGIN      
        1 agcgcggcgc tcggctttcc ggcagtaccc ggatggaggg gtaatggccg ccatctggga
       61 ctcgcaggca atggggacca cggcagatac catctcttga tcactgtacc tgattgtggg
      121 tggcattgtc caggcattaa gttgtgtgcc tttgttcctg ggagaaagtt gatactagca
      181 agtcctcatt cttcctggct tctggactca gctgagaatt ctggattctt tctttctcat
      241 atgtcaacct gagccctctg gcctcgagag agctccaacc tgatctttcg ttcaagcttc
      301 catctctccc acgggaagca tccagtcgtc actaatatca gttcatgctt gatggtgttt
      361 tatgctggct cccatgagtg acctgttcag gtgaattgat ttgaggaaaa tcctggttat
      421 tttgaagttg ttgcagctca gtattatttt gtgtttaaat cacaaataac ttcacaagtt
      481 ttcagaacaa aagaaactgg attttttttt taattaaaaa aatgccattt gaacagacac
      541 agctattttg tgatgaaaaa ccaactattt tgaaaaaact tgatacaaga aatgagatag
      601 cagatactat cagatcagta tctacatcaa aaatttcaga aactagtttt cagtatgtac
      661 taaaagatgt gaacatctgt ttacccaaga taaatattcc aaatgaaatc ttaatgaaac
      721 atgaagttga aaaatacaga ctattatttc agagtaaacc acagactgca aggaagtcta
      781 tcagtgtaaa aacagtaagc tgtgctgagg agtgtgtact gctttgtaaa tctgagcgag
      841 ctgaagatga gactgtaaat atgtctgcaa aaatactcaa ctttagttgt tcaaaatgcc
      901 aagacagtac tcagtatagt ccaaatgatt tgcagaaaca ctttgaaatg tggcatcatg
      961 gtgagttacc ttcatttcct tgtgaaatgt gtagtttttc agcaagtgac ttccagatat
     1021 ttaaacaaca ccgaaaaacc cataggaaca cttttgtaaa atgtgatatt tgcaacagtg
     1081 agcgttcata tactttattg gacttgacaa aacacttcac atctaaacat tgtgttaatg
     1141 gtaattttca gtgcgaagag tgtagattct ttacccagga tgtcggcaca tttgttcagc
     1201 acattcatag acataaagaa gtgcactata aatgtggaaa atgccatcac ctgtgtttta
     1261 ccaagggaga gctgcagaag caccttcgtg tccactctgg tactcttccc ttcacttgtc
     1321 actactgtag ctatggtgcc attcataaag accaacttat cagacatgtt ataaccttgc
     1381 ataaagaaca cttatatgcg aaagaaaaac tggaaagaga ccaatatgat aaaagagtgg
     1441 caaagactac aacaacagga cttaaactaa tacttaaaag atataaaata ggtccaacaa
     1501 agacattttg gaaacgtaag acaattacca gtggaaatga tgaaagtata ggaaaaaatg
     1561 ctcaagcgtt taatatagtg agcaaaacac agactaaatc tgaagaccag agtcaagagc
     1621 aagtaaatgg agaaaagggt gaaaaacagc actgtgagaa tggtgataag cccgtcgaat
     1681 cagagtcaga aaaggcaacg gtgctatcca ccgggcaata taataaagcc gacgagggag
     1741 caagtactac ttcttcaagt gtcttgagtg ctgtacaagg acctacggtg ttactggtga
     1801 gaaataataa gataacaatt cctgctaact acagtgctaa gtttatgggc ttcaagatgg
     1861 tagatgggag acagcatatc gtaataaaat tgttgcctgc caataaacag attttacctt
     1921 caccagtctt acaatcaaac acagaaaaga atagtacagc taatttgtca ccccaggctg
     1981 tggccaacac tgggtttgca actggattaa caaccaaagt gaatgacaca gattttgtga
     2041 aagcagctcc acctgcatgt tcatcccctg tgcttgccag gaaagtaatt tctgaaaagg
     2101 aagcagcttt catatctgaa aagaataata cgcttcagat ggtagacgac agtaaaagtt
     2161 tatcttcatt gccaacaaca tcaactacat cagtgcgtgt gactacaaaa gttgaagcaa
     2221 gagataatgt tgacttgtgg gaaaatgata gccctcagag tcatccagat gcatcagata
     2281 cctccatcag tagtccagat aaagtcagcc ttactcctaa gcccaatgca tacagttctg
     2341 gagatatgca taactattgc attaattatg tcaactctga gttacctgct gaatcctcca
     2401 actcttttga gttctctaac caaggatcat taccttttca taattattca aaggtaaata
     2461 ataaacgccg taggttttca agagcaacac tgtgtgaaaa ccttcagaag gaatctccaa
     2521 ataaaacagt tactcagcaa tcaactagtg atagcgatac agcttcacca ctactgagaa
     2581 aagagagctc taactcagat aacctgtttg cgtccatcaa ccctttaaat ggaactttaa
     2641 aaataaaaac tgaaattgaa gaaccataca atttagaaga aacacaaaac tttaatgaac
     2701 agagcctgtt cactaatgaa aaccaaaatt tattgaatgt gactgaagaa cctaaatgga
     2761 atgacatacc cagtgccggc tcccctatga tgcctcgaat tacatctgtt ttctctctcc
     2821 agagtgagca ggcttcagaa tttttgacac ctgaagtaaa tcagttgctt caagatacat
     2881 taaaaccaaa atctgatata aaggaagatt ctaataacat tccaagtaaa aaccttccat
     2941 tcgattgtga ccaaacactt aaaaagtctg aagaagtagt gataaaatct tcaaaagact
     3001 tccaaatgca agacgacatc ccagttcctt ctgccagtgt aggtgttaat gtgcctgcaa
     3061 atgatctgaa ttcaaaatgt aatggacaag aaaaacaagg attgtcagta ttacaagatg
     3121 tgagagattc agaggtgacc actaaaattc caaatatcat cacattactt aagactcaat
     3181 cagatgcaat aataacacaa caacttgtaa aagacaaact ccgaaccaca acacaaaatt
     3241 caggtcctgt atatgttcag aatccatttc taacctcaga gcagaaaaat cctgtttttg
     3301 ttcaaactcc aaaaggtttt attataccac tgcatgttgc taacaagcct ggattgcacg
     3361 ttttttctgg aagaccagtt cctttggtta atactcggag tgtgcctgct actctccttg
     3421 taaacaagaa acctggaatg cttttggcaa ctaataatgg gaaacctgaa agtgttccca
     3481 cggtgaagac tgagaatgtt catagttacg gaactgtgac taaggaacct tgcaaaacac
     3541 cttttctgaa ggcagaacac aataacagtt gtcttacacc tggactttgt tccagcattg
     3601 gaaattgtgt gaacatgaaa acttgctcag agaatacatt gccattgaaa ggttcttaca
     3661 ttattaaaac atcagtaaat tcttcagtga aagctgttcc taacattcta cctgagcagc
     3721 agggccctaa gatgaatatc ttggatacag taaagcaaca gaatgaaaat ttaccaaaag
     3781 catctctcta caccctcatg cctgacggta aacaagctgt attttttaag tgtgtgatgc
     3841 caaataacac taaactgctt aagcctaagt tagtccaaag tagtacctac caacatattc
     3901 agccaaagag acctgcagga gcaccacaga aaatactcgt aaagattttt aatcctgttt
     3961 taagtatgag tgcttttaat aatctttcag ctagcaactc tgcatcctca ttccagaaag
     4021 agattgtacc atctaaacca actgtacatg gagagcagaa agagccagaa acttctagaa
     4081 atgccttacc agtcttagtg catggtttga tgccagcaaa tgaaactgtt cattcttcta
     4141 ctacagcatg cccaggatct tctgaggaac cagtatatat cagtgagcgt tcagaaacaa
     4201 gagttttaag aggtaaagca aattgtgcag tcgagagaaa tttcaataaa agaaagactt
     4261 gtaaaaataa gtttgcaaaa attaaaactc ggatagatca agattctgaa actgcttttg
     4321 tatctagaaa cagaagctgt aaacgaaagt acattgataa ttaccaagaa cctccaagga
     4381 aaaagtcaac attgaataga aaaggtaaag aaagggctag tgctgaagat gtccaggaag
     4441 catttggatt tagcagacct aggcttccaa aggattctag tagaactttg agacttttcc
     4501 cttttagttc caaacagctt gtgaaatgtc ctaggagaaa ccaaccagtt gtggtcttga
     4561 accatcctga tgcagatacc ccagaagtag aacgtgtaat gaaaactatc gcaaagttta
     4621 atgggcatgt actgaaggtt tcattgtcac aaacaactat taatgcttta ctgaagccag
     4681 tttctaacac ttctgaaaca acttacaatg acttttccaa gagacaaaaa atgcttaaac
     4741 ctgttaattc tgtgaaagaa agatttgtgc taaaactaac actcaaaaaa acaagcaaaa
     4801 ataattacca gattgtaaaa actacctccg aagatgtctt gaaatctcag tttaactgct
     4861 ggttctgtgg tagagttttt gacaatcaag atgtgtgggc tggccatgga cagagacatt
     4921 tagtggaagc tactcgggat tggaatatgt tagaataata tactgtgatt accaaggaaa
     4981 agatatctca gaaggaaaaa aatgggttgg tataattcag gcattttcta cattggtata
     5041 gttttgaaca tttctaagag ttggttatat ttctgtggaa gaacaaaagc tttatgtgtg
     5101 gtacttggaa ataccacagt taacgtatgt tttgaaagaa agtaattagc acagaccttg
     5161 atttagttgt gtaaagatgc atatgtggga cagaagggta aggaaatttt tgacaaaaga
     5221 gttttcccat ttgaatttag agactgagta gaagataatg gtggacagcc ctttcttctc
     5281 ccaccagcct taccgacctg acaagagttt ctctggaggt gaagaacctt ctcacaaatg
     5341 gttccctgct acatataaag atggactgag cttagataaa gttactttct gttatagttc
     5401 atttgaaagg tattaatttt ctttgaagct acatcttgct ggactgtagt taaacttgaa
     5461 ataatgcttg aagagtttag ggcaagtcaa tgctgttgtt gttgctctgc cctgtgtcag
     5521 attggaatgc cagttaattg tcttttcctg tggctgtctt ccgtcactgc ggtaactggg
     5581 gcaatctcca gaggagaaac aaactttttt ctaaaattca cttgaacgtc aacattttct
     5641 tgaatttggt cctattttcc agtgatcccc ttgcacagaa ctatgcttat ctgattggaa
     5701 gtgtccataa ccaaatgact tttttatctc ccttggttgg catcccctca aaacgaacag
     5761 aaagaacata gaagcacttc aaagggaatg cttttcttga aaattaaaac tatttttaca
     5821 gagataatat tttgaagcaa ggttaacaaa gcagattata tttttgcttg tgtttaatta
     5881 ctgttcttac ctaaacatgt ccacattagg atagaccatt ttcaggatga ccaacaaccc
     5941 aaaatagtgt taatagttgg tatttgaaaa cagagaagca agcattaacg atggactcag
     6001 tagcagttca ttaaacttga aaaattccta agagacatgc ccaacaattt caaaatggat
     6061 tattttcata acaatgcatt taccatatac atttgcatca atttttttgt cttattggat
     6121 aatgaagtta tattagaaga tgatactcta tgtaattttt tgttttgtta ttactataca
     6181 tgttaatgac attttcattg attagatcaa tttcagggct tttttgtata taacaaaaat
     6241 gtacatattt ttgtattgat tatgtaaatt tgcacaagaa gtttatgaca caaaaagtat
     6301 tttcttttta gttctctgca tgcattaata aaagtgggtg atttaaaaat aagaaaaaag
     6361 gactgtaccc atgttatttt attggttttt attggttttt atttctgacc ttttttgttt
     6421 gttttttgtt ttggttgggg acatactttt tttttcaggg attaaacact attattagca
     6481 agtgcctaaa aatgatgtga accgtttaca catgccaact gtaacagtag gtcctaaatg
     6541 ggcccattcc cctaatagtt ttgatttaaa caaagccata aatagatgct tcaagctata
     6601 ttgctatgca cattatactt gtactgtttt tgtgcagttt atctactttc ttagtggaat
     6661 attttttgta taaaacctgt tataattgtg tttcttgaat tgagtctgag tggaattgat
     6721 tgaaaatgca cagtatatat tgataatgta catgatgttt aaagaacggt aagcattaat
     6781 ttccttgttc attgttaatg aaggttttct tcaattaaac ttaagcttgt gtttacatga
//
