LOCUS       NM_001289836            3983 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus zinc finger protein 473 (Zfp473), transcript variant
            1, mRNA.
ACCESSION   NM_001289836 XM_006540877
VERSION     NM_001289836.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3983)
  AUTHORS   Guo,G., Huss,M., Tong,G.Q., Wang,C., Li Sun,L., Clarke,N.D. and
            Robson,P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
REFERENCE   2  (bases 1 to 3983)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   3  (bases 1 to 3983)
  AUTHORS   Hoffman,B.G., Zavaglia,B., Witzsche,J., Ruiz de Algara,T.,
            Beach,M., Hoodless,P.A., Jones,S.J., Marra,M.A. and Helgason,C.D.
  TITLE     Identification of transcripts with enriched expression in the
            developing and adult pancreas
  JOURNAL   Genome Biol 9 (6), R99 (2008)
   PUBMED   18554416
REFERENCE   4  (bases 1 to 3983)
  AUTHORS   Evsikov,A.V., Graber,J.H., Brockman,J.M., Hampl,A., Holbrook,A.E.,
            Singh,P., Eppig,J.J., Solter,D. and Knowles,B.B.
  TITLE     Cracking the egg: molecular dynamics and evolutionary aspects of
            the transition from the fully grown oocyte to embryo
  JOURNAL   Genes Dev 20 (19), 2713-2727 (2006)
   PUBMED   17015433
REFERENCE   5  (bases 1 to 3983)
  AUTHORS   Okazaki,N., F-Kikuno,R., Ohara,R., Inamoto,S., Koseki,H.,
            Hiraoka,S., Saga,Y., Seino,S., Nishimura,M., Kaisho,T., Hoshino,K.,
            Kitamura,H., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: IV. The complete nucleotide sequences of 500 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 11 (3), 205-218 (2004)
   PUBMED   15368895
REFERENCE   6  (bases 1 to 3983)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   7  (bases 1 to 3983)
  AUTHORS   Piao,Y., Ko,N.T., Lim,M.K. and Ko,M.S.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CD539573.1, AK030093.1, AK050747.1 and BE446988.1.
            
            On Jan 31, 2014 this sequence version replaced XM_006540877.1.
            
            Transcript Variant: This variant (1) represents the longest
            transcript and encodes the longer isoform (1). Variants 1, 2 and 3
            encode the same isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: CN675891.1, CN671875.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-552               CD539573.1         1-552
            553-1742            AK030093.1         379-1568
            1743-2188           AK050747.1         1417-1862
            2189-3974           AK030093.1         2015-3800
            3975-3983           BE446988.1         1-9                 c
FEATURES             Location/Qualifiers
     source          1..3983
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 28.9 cM"
     gene            1..3983
                     /gene="Zfp473"
                     /gene_synonym="D030014N22Rik; zfp-100; Znf473"
                     /note="zinc finger protein 473"
                     /db_xref="GeneID:243963"
                     /db_xref="MGI:MGI:2442697"
     exon            1..440
                     /gene="Zfp473"
                     /gene_synonym="D030014N22Rik; zfp-100; Znf473"
                     /inference="alignment:Splign:2.1.0"
     exon            441..617
                     /gene="Zfp473"
                     /gene_synonym="D030014N22Rik; zfp-100; Znf473"
                     /inference="alignment:Splign:2.1.0"
     CDS             558..3236
                     /gene="Zfp473"
                     /gene_synonym="D030014N22Rik; zfp-100; Znf473"
                     /note="isoform 1 is encoded by transcript variant 1; zinc
                     finger protein 473 homolog; zinc finger protein 100"
                     /codon_start=1
                     /product="zinc finger protein 473 homolog isoform 1"
                     /protein_id="NP_001276765.1"
                     /db_xref="CCDS:CCDS21213.1"
                     /db_xref="GeneID:243963"
                     /db_xref="MGI:MGI:2442697"
                     /translation="MERKEDDLKGGCWNQPAVAEEFETLKDLAMDFTVEDWKDLESEW
                     DQRDLFWDVTLNHYQDMFSFTDTSQPSLTSQPDVREELEATSTEVPETKSSPLQSGFV
                     EEDFSQIMEIFSNGQLNFEACIGEDWLNSFLGDPESLPRPDISDKESPADHQSPESKS
                     GLSPGPPLCTREDAVMSASPEKTLTPVILKESRSDLSQEDSVQGHEKPYKCSECGESF
                     SQSHHLIQHWVLHTSGEPPIWREQQRGLSQGAHFPMCPGTPASYESYTCQECGKRFSQ
                     NVYLQWHQKIHTGEKLCKTQSDSNLEGLSRSPSVEPGKQRLSKDTDSAKPSTIHGQDQ
                     EKPPTGESRDQENLHESQPGDRPSVLHPKPLRHQKTPTNAKCFRCKKCGETFSGAFHL
                     AKHQRAHAQRLYKCASCPAVFNLSKHCFQHRKSHFPSAACECQGCRKSFNWRSSLIKH
                     QAIHKGEKPYKCDECGKAFNHSSTLKIHQRIHSGQKPHKCSECGKAFCRRTDLTEHQR
                     VHSGFRPHQCPVCARTFNRPSHLVRHRLRHAEERHFGCAKCKETFIYKEQLERHNKIH
                     TIEGLYECKQCGEHFICRSTLNCHLSIHIRENTSEKVVGQNSQHTEKCFKNTKCRKAP
                     NHSRYLGQHEKIHAQVTSGECDPCGETYDQSVQPICHQSICAGVKPSECAEPEKCTRN
                     TSASEHHPSQREPSFKCDIYNRAFKQRAHLSKHQLIHITEKPFKCNECDRAFKQSNYL
                     IQHQKTHTAEKHFECSECGKTFHQRSCLSKHQKIHSGEKPFKCGDCGKAFISGAQLIR
                     HQRIHTGEKPYVCQECGKTFSQSSCLTLHLRIHTGEKPYTCGTCGKAFAQRANQRKHE
                     RIHTGEKPYACGLCGKAFGLRTHLQQHQRIHTKAKP"
     exon            618..750
                     /gene="Zfp473"
                     /gene_synonym="D030014N22Rik; zfp-100; Znf473"
                     /inference="alignment:Splign:2.1.0"
     exon            751..819
                     /gene="Zfp473"
                     /gene_synonym="D030014N22Rik; zfp-100; Znf473"
                     /inference="alignment:Splign:2.1.0"
     exon            820..3983
                     /gene="Zfp473"
                     /gene_synonym="D030014N22Rik; zfp-100; Znf473"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3957..3962
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp473"
                     /gene_synonym="D030014N22Rik; zfp-100; Znf473"
                     /note="hexamer: AATAAA"
     polyA_site      3983
                     /gene="Zfp473"
                     /gene_synonym="D030014N22Rik; zfp-100; Znf473"
                     /note="major polyA site"
ORIGIN      
        1 cctgttgtca tttttaaact ctccttgctt ctgtgctctc tctgtaatct cagttttgcc
       61 ttcaaactgt atctatggca acccgctgtc acctccaaat ggaattttcg gggtgtagaa
      121 ggtgaaagta gtcctataac agggtagtgg gccatccaac cttggtgtca cttagccatg
      181 aatctgtttc ctctctactt cctagagggc tcagtgggtg gagaccacag gtggtgggtc
      241 ctggaatttg gcgcggagtt acctgggtgg gataaatttg aggagaagtt tctggaaccg
      301 gaacttcctc ggaggaattt ccccctgtac tctgagggag ccctcctcat gaggagttgg
      361 gttttcttgg gatcctggaa agcatatgtt ctttgggttg ccagccatgc tgaggtacgg
      421 agacacggag ccatgccgag caagctcatg ttgggacttg tcctgctact tgtgatattt
      481 tggagacaca ttcagcatga acaggaagtc agccatagaa ggatggaaga ctttctgcag
      541 ctctgctagc ggggaccatg gagaggaagg aggacgacct taaaggaggt tgctggaatc
      601 agccagctgt ggctgaggag tttgagaccc tcaaggattt agccatggat ttcaccgtgg
      661 aagactggaa agacctggag tcagagtggg accagagaga cctgttctgg gatgtgacgc
      721 tgaaccacta ccaggacatg ttctcattta cagatacttc gcaacccagc ctgacttccc
      781 agccagatgt cagggaagag ctggaagcca ccagtactga agtgcctgag accaagagct
      841 ctcctttgca gagtggtttc gtagaagaag acttctccca gattatggag atattttcca
      901 acgggcaact caactttgaa gcctgtatag gtgaggattg gctaaatagt tttctcggag
      961 atccagaaag tcttccaaga cctgacatca gcgacaagga aagccccgcg gatcatcaga
     1021 gtcctgagtc caagagcggc ctcagtcctg ggcctcccct ttgcacaaga gaggatgctg
     1081 tgatgtctgc tagtcctgaa aagaccctca ctccagtgat actgaaggaa tccaggagtg
     1141 acctgagcca ggaggactct gtccagggac acgagaagcc atataagtgt agtgagtgtg
     1201 gggaaagctt cagccagagt caccacctca tccagcactg ggttctccac acctcagggg
     1261 agcctcctat atggcgagag cagcagcgag gtctcagcca gggtgctcac tttcccatgt
     1321 gtccagggac tccagcaagc tatgaatcct acacgtgtca ggagtgtggg aaaaggttta
     1381 gtcagaatgt gtacctccag tggcatcaga aaatccacac tggagaaaaa ctttgtaaaa
     1441 ctcaaagtga cagcaaccta gaagggctct ctaggagtcc gagtgtcgag ccaggaaagc
     1501 agcggctgag taaagacact gactcagcaa aaccgagtac cattcacggt caggaccagg
     1561 aaaaaccacc tactggtgaa agtcgtgacc aagaaaacct gcatgagagc cagcctggtg
     1621 acaggccatc cgttcttcat ccaaagcctc ttaggcatca gaagactcct acaaacgcta
     1681 agtgcttcag atgtaagaag tgtggggaga cattcagtgg ggcctttcat ctagctaaac
     1741 accagagagc ccatgctcag agactctaca agtgcgcttc gtgccctgcc gtcttcaacc
     1801 taagcaagca ttgcttccag catcgcaagt cacatttccc cagcgcggcc tgcgagtgtc
     1861 agggatgcag aaagagcttt aattggcggt catcactcat taagcaccag gctattcaca
     1921 aaggagagaa gccgtacaag tgtgatgaat gtggtaaagc tttcaaccac tcctccaccc
     1981 tgaagatcca ccagaggatc cacagtggac agaagcctca caaatgcagt gagtgcggga
     2041 aagccttctg tcggagaaca gatcttactg agcatcagcg agtccactcg ggcttcagac
     2101 cccatcagtg tcccgtgtgt gccaggactt ttaaccgacc ttcacactta gttcgacacc
     2161 ggctgagaca tgctgaagaa aggcactttg gctgtgctaa atgcaaggag accttcatct
     2221 ataaagaaca gctagagcgg cacaataaaa tccacaccat cgagggcttg tatgagtgta
     2281 agcagtgtgg agaacacttc atttgcaggt caactctgaa ttgccacctg agcatacaca
     2341 ttagagaaaa tacaagtgag aaagttgtgg gtcagaactc acagcacact gaaaaatgct
     2401 ttaagaatac caagtgtaga aaagccccta accacagcag atacctaggg cagcatgaga
     2461 agattcatgc ccaggtgaca tccggtgagt gtgacccatg tggggaaacc tatgaccaga
     2521 gtgtgcagcc catttgccat cagagcatct gtgctggtgt gaaaccaagt gaatgcgctg
     2581 agcctgagaa atgcacgcga aacacctctg ccagtgagca ccatccttcc caaagggaac
     2641 catccttcaa gtgtgacata tacaacaggg ccttcaaaca gcgtgcccac ctttcaaaac
     2701 atcagttgat tcacatcact gagaagccct ttaaatgcaa cgaatgtgac agagccttca
     2761 agcagagtaa ctacctcatt cagcatcaga agactcacac tgcagagaag cactttgaat
     2821 gtagcgagtg tgggaaaaca tttcatcagc gatcatgcct ttctaagcac cagaaaatcc
     2881 actcagggga gaagcccttt aagtgtggtg actgtgggaa agccttcatc tctggtgccc
     2941 agctcatccg acaccagaga attcacactg gggagaagcc gtacgtctgc caggaatgtg
     3001 ggaaaacctt cagccagagc tcgtgcctta cccttcacct tagaattcac actggggaga
     3061 agccgtacac atgcggcacg tgcgggaaag cctttgctca gagagcaaac cagaggaagc
     3121 acgagagaat tcacactggg gagaagccct atgcctgcgg gctgtgtggg aaggccttcg
     3181 gcctccgcac ccatctccag caacaccaga gaattcacac caaggccaaa ccatagagtt
     3241 cagactactg tcaggacgcc tgacagctcc actgctctga gcaaacgtca gaaactttac
     3301 acttgtagca agtaacactg ccgagagccg cttggttaca gcggagtccc atacttctga
     3361 aggccttcat ttgaagccag ccattgaaac caacccattg caaacctctg ctctctataa
     3421 gttctaataa aaattgctga ggcagattgt acagacgcat ttcatctaga cccgcggttc
     3481 tcaactttcc tgatgctgcg accttttaat acctcatgct gtggtgacct ccaaccataa
     3541 aatcattctg ttgctacctc ataacactaa ttttgtttct gttatgaatc gtactgtgaa
     3601 gttttccagt ggtctcagga gatccctgtg aaagggtttt tccacccaca aaggggacaa
     3661 gacccacagg ctgatttcag aagctatgta atgtcaggat ttggtggtag actttagagc
     3721 cggtccacct ggatagaatt ccagttctgt cttcctaatt agccttggaa aaatcagaaa
     3781 agcttattag tttcctcatc tgtaaaatgt gcataatatc catattcctc agggctatgg
     3841 tgaggattaa attttgagca tctgatacct ggcacacagg aaatgtttgc tattgatgaa
     3901 gtgtggatga gtgtctaact atctagtaca aatataattt tatgataaag acaagaaata
     3961 aagtgttcgc tgtggttaat gtt
//
