LOCUS       NM_028316               4211 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus zinc finger protein 444 (Zfp444), transcript variant
            2, mRNA.
ACCESSION   NM_028316 XM_133159
VERSION     NM_028316.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4211)
  AUTHORS   Strogantsev R, Krueger F, Yamazawa K, Shi H, Gould P,
            Goldman-Roberts M, McEwen K, Sun B, Pedersen R and Ferguson-Smith
            AC.
  TITLE     Allele-specific binding of ZFP57 in the epigenetic regulation of
            imprinted and non-imprinted monoallelic expression
  JOURNAL   Genome Biol 16 (1), 112 (2015)
   PUBMED   26025256
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4211)
  AUTHORS   Taniwaki T, Haruna K, Nakamura H, Sekimoto T, Oike Y, Imaizumi T,
            Saito F, Muta M, Soejima Y, Utoh A, Nakagata N, Araki M, Yamamura K
            and Araki K.
  TITLE     Characterization of an exchangeable gene trap using pU-17 carrying
            a stop codon-beta geo cassette
  JOURNAL   Dev Growth Differ 47 (3), 163-172 (2005)
   PUBMED   15840001
REFERENCE   3  (bases 1 to 4211)
  AUTHORS   Araki K, Imaizumi T, Sekimoto T, Yoshinobu K, Yoshimuta J, Akizuki
            M, Miura K, Araki M and Yamamura K.
  TITLE     Exchangeable gene trap using the Cre/mutated lox system
  JOURNAL   Cell Mol Biol (Noisy-le-grand) 45 (5), 737-750 (1999)
   PUBMED   10512203
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK018079.1, BC139361.1 and AC148989.4.
            
            On Mar 25, 2009 this sequence version replaced NM_028316.2.
            
            Transcript Variant: This variant (2) differs in the 5' UTR,
            compared to variant 1. Variants 1 and 2 encode the same protein.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            transcript and genomic sequence to make the sequence consistent
            with the reference genome assembly. The genomic coordinates used
            for the transcript record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK089886.1, BC139361.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-44                AK018079.1         3-46
            45-1568             BC139361.1         1-1524
            1569-4211           AC148989.4         139813-142455       c
FEATURES             Location/Qualifiers
     source          1..4211
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 3.58 cM"
     gene            1..4211
                     /gene="Zfp444"
                     /gene_synonym="2810031J10Rik; 6230401O10Rik; mFLJ00134"
                     /note="zinc finger protein 444"
                     /db_xref="GeneID:72667"
                     /db_xref="MGI:MGI:1923365"
     exon            1..62
                     /gene="Zfp444"
                     /gene_synonym="2810031J10Rik; 6230401O10Rik; mFLJ00134"
                     /inference="alignment:Splign:2.1.0"
     exon            63..403
                     /gene="Zfp444"
                     /gene_synonym="2810031J10Rik; 6230401O10Rik; mFLJ00134"
                     /inference="alignment:Splign:2.1.0"
     CDS             92..1087
                     /gene="Zfp444"
                     /gene_synonym="2810031J10Rik; 6230401O10Rik; mFLJ00134"
                     /codon_start=1
                     /product="zinc finger protein 444"
                     /protein_id="NP_082592.2"
                     /db_xref="CCDS:CCDS20770.1"
                     /db_xref="GeneID:72667"
                     /db_xref="MGI:MGI:1923365"
                     /translation="MEAPTTQPVKQENLAVEALTLDSPWHRFRHFHLGDAAGPREALG
                     LLRALCRDWLQPEVHTKEQMLELLVLEQFLSALPADTQAWVCSRRPQSGEEAVALLEE
                     LWGPATSPDGSSAMRAPRDVTEGPGVSVGKEESGAIPLGTSSGTEVPATENSGAMRPY
                     KQEPGSPPPAPLAPVLPAFLAAPGTVSCPECGKSPLKPAHLLRHRQSHSGEKPHACPE
                     CGKAFRRKEHLRRHRGTHPGSPGPALRPLPAREKPHACCECGKTFYWREHLVRHRKTH
                     SGARPFACWECGKGFGRREHVLRHQRIHGRAAAVAQGTSAPGPEGGGAFPPWALG"
     exon            404..512
                     /gene="Zfp444"
                     /gene_synonym="2810031J10Rik; 6230401O10Rik; mFLJ00134"
                     /inference="alignment:Splign:2.1.0"
     exon            513..4211
                     /gene="Zfp444"
                     /gene_synonym="2810031J10Rik; 6230401O10Rik; mFLJ00134"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagctttgtg cgcatgtgcg ggaaggtgag gttgtttggg gggcctcgcc caggagagtg
       61 aggtgctggt aactcaaacc taggtggcct catggaggcc ccaacgaccc agccagtgaa
      121 gcaggagaac ctggcggttg aggccctgac gctcgactcc ccgtggcacc gcttccgcca
      181 cttccacctg ggcgatgcag cagggccacg tgaggccctg gggctgctcc gtgccctgtg
      241 ccgggactgg ctccagccgg aagtgcacac gaaggagcag atgctggagc tgctggtgtt
      301 ggagcagttc ctgagcgccc tccctgcaga cacccaggcg tgggtgtgca gccgccggcc
      361 ccagagcgga gaggaggctg tggcgctgct ggaggagctc tggggcccag caacctcccc
      421 agatgggtcg tcagcaatga gggcacctcg ggatgtgacc gaaggcccgg gggtcagtgt
      481 tggaaaggaa gaaagtgggg caattccctt aggaacctcc tctgggacag aggtacccgc
      541 aacggagaac agcggggcca tgcgcccata caagcaggag ccgggcagcc ccccaccagc
      601 tccactggca ccggtcctcc ctgccttcct ggcagctcca ggcactgtgt cgtgcccgga
      661 gtgcgggaag tctcccttga agccggcgca tctactgcgc caccggcaaa gccactccgg
      721 tgagaagccg cacgcgtgcc ctgagtgcgg caaggcattc cggcgtaagg agcacctgcg
      781 gcgccaccgc ggcacgcacc ccggcagccc agggcctgca ctgcgccccc tgcctgcgcg
      841 cgagaagccg cacgcgtgct gcgaatgcgg caagaccttc tactggcgcg agcacctggt
      901 gcgccaccgc aagacacact ctggcgcgcg acctttcgcc tgctgggaat gtggcaaggg
      961 cttcgggagg cgtgagcatg tgctccgtca ccagcgtatc catggccggg cggccgcggt
     1021 agctcaaggg acttcagcac caggtccaga gggtggtggt gcctttccgc cctgggctct
     1081 ggggtagctg gggttctaaa cacctgctgc agggcgtcat ccccttagag ttctcccaac
     1141 cccattgcct cttccctttt gggccccata tccactcctc ccttccttct ggagttctca
     1201 gctttcaccc acccctgcga aagacccttc tctccttccc tcattccatc cccttttcat
     1261 ggaggagaga cttgccccag gacacccttc aagtgagaaa gggggctcag ggaaggagca
     1321 gtgcccccac tcctcccttc caaggatctt gatcttgaac cccaggacag agtcggggcc
     1381 aatggagaga agaggcctgg acccggatct ggttctctcc atagcctaaa ggaatgaggt
     1441 ggggagaggt acccgagaaa gcttgtcaca gatggcaggt caccagcacc tgagagagta
     1501 ataaagtgac tgactcagtg tgtacaggag tctgactctc cggtgttgtg ggagctgagc
     1561 atctgaggca caggggactt ggggactcct cacacatcgc aggaagaaag actagactcg
     1621 gaaggtctgg cagcagatca ctcccatcct ggttgtcctg gctgtatata gcttcaggta
     1681 ggtggaccgc ccccgaaatc cccttttctg agcaatagtt cccgtttcgt aagtcatggt
     1741 gcttgtaatg tcgcccacaa ccattactaa gttaataata ttgctaggtg cctccggtcc
     1801 actcctaata accaagtgcc agccagcagg tctgaaagca cctcagttct tcacagtgac
     1861 cgtccaggaa tctagaccta acttctcttc aggatgcgct tctttgggta taaagtctgc
     1921 ccagtctgct gtggagcaga ctctgggaca gtccttagcc tggccctgct ggctcttctg
     1981 ggtaccagct ttgagctcct gggctctgct tccttaccag aactctatgt aatggcatca
     2041 cacagtggag ggaggtagag gaaccccaat gcccactcaa tttttttttt ccttaagatg
     2101 agaacttgct gaatcagtct aagctgacct tgatctcatt gtgtaaccaa aggtgaccac
     2161 agatttctgg ttctcctgtc tccatctccc cagtttgaag atcataagta tgcactatgt
     2221 cgtctgtgat cttaaaaggc atgtgccacc atgcccaagt tttattccgg gtttgcttgg
     2281 tgggtttttt tttttgtttg tttttttgtt tttttttttt tttttttttt ttgagacaga
     2341 aatgtcatgt atttctcact atcctgaagc ttgccatata tcaggctgcc cccagactca
     2401 taagagatcc gcctacctct gcctcctgag tgctgggatt aaaggtgtgg accaccatgc
     2461 ccggttctcg ttcttaatgc atacatggga ccttcctgga atacataccc aaagaaatgg
     2521 tcgaagctgg acacaactat acttttagga aaagagtaag tgtatgaata agtgacagaa
     2581 tgggtagggg tggggctctg gcagaaatgg gagtttcgct aggaaataca gttaggaggg
     2641 ttatatgatg ctatcttcat gagagtatgc attcctttga ggcagtgctg ccctctggtg
     2701 gtgagggctg tttctggaac taagaaggca tcatctctgg gagttttttc acctcaagta
     2761 agaatgagca ggtagacagc cctttccaca aagaggtttt tattgttgtt ttggttttgg
     2821 tttctctgtg tatccctggc tgtcctggaa ctcgctttgt agaccaggct ggcctcaaac
     2881 tcagaaatct gcctgcctct gcctcccgag tgctgggatt aaaggcgagt gcccccacgg
     2941 ccggctcaca gaggtttttc aggagcatat taactcatcc tttacacctt cagtagtctt
     3001 gactgtggcg ctcctgcccc agcccctgtt aaccatgctg ctgctgttgc ttcaggcttt
     3061 ccagtcctag tggcaggaaa gttatctaat tcgtttttcc aaaattgtat agctactctg
     3121 tttcagagac ccacaatggt gtagaagcag ataacaccat ccacctttga caaagctgcc
     3181 aagccccaat gtccacccta acatggctaa tgaaccctag ttctgaagac cacaccaaga
     3241 cattgatgca tgcctcaggg tccacaccca tgcagtatct ttcatggcag cacttggtgt
     3301 ggaggtgtcc gtcttgtgca gtaagacagg ctggagaagt cacattatca gctgcaggct
     3361 ttcaagttac tgggaggagc atggaacaat gggaaggtgg gggtgtcgtg cagacagagg
     3421 ccatgtcatt tggcataaca ggaagcacac agtgaaaatg ctgtgcttgt ctgagatgaa
     3481 tcagtgggta agagcacttg ctctgtaaac aaggacccga gctccattta tcagcatcta
     3541 taacattgca ctggcgcaaa agcagaattc ttactagaga aatagaactg agaaccagtt
     3601 ctcctatagc cacccagagg ccagcggtac acactgaaga aaagatggca tcttcagcag
     3661 atggtgctgg tcacacttga tagacacatt cagaatgagc atgcattcat atccatcacc
     3721 ctgcacaaaa ctcacctcca gatgggccac gggcgtcaac ataagtccag ataccttgaa
     3781 tctgatagaa gagaagatag ggaataggct tgaactcgct gtcccaggaa aggggtttct
     3841 gagcagagca ctgatagccc aggcactaag tgctacactt aataaatggg gcctcataaa
     3901 gctgaaaagc tttgcacagc aaaggacact atcattcaag caaactgaca gcgggaaaag
     3961 aaatcattac cagctaccag tctagcagag agtctgcacc cagaatgtag agaagactaa
     4021 agaaaccaag cagcatgtaa acccagccca attttaaaag tgaggcatgg caatatacag
     4081 agttctccaa aggttaaaca aatggccgag agacgttttt acagtgttca tcatctttgc
     4141 catcagtgaa aatgcaagtt aaagtgactt tgagattatt ttagcctagt cataatggat
     4201 atgatttaaa g
//
