LOCUS       NM_001310645            7164 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus zinc finger protein 442 (Zfp442), mRNA.
ACCESSION   NM_001310645 XM_006500041
VERSION     NM_001310645.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 7164)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 7164)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AB470967.1 and AL935313.7.
            
            On Jul 15, 2015 this sequence version replaced XM_006500041.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR9219380.62671.1,
                                           SRR10223971.3396.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164133, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2127              AB470967.1         1-2127
            2128-7164           AL935313.7         38474-43510         c
FEATURES             Location/Qualifiers
     source          1..7164
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 74.43 cM"
     gene            1..7164
                     /gene="Zfp442"
                     /gene_synonym="ZIPO-II"
                     /note="zinc finger protein 442"
                     /db_xref="GeneID:668923"
                     /db_xref="MGI:MGI:3651999"
     exon            1..100
                     /gene="Zfp442"
                     /gene_synonym="ZIPO-II"
                     /inference="alignment:Splign:2.1.0"
     CDS             98..2101
                     /gene="Zfp442"
                     /gene_synonym="ZIPO-II"
                     /note="zinc-finger protein in podocyte II"
                     /codon_start=1
                     /product="zinc finger protein 442"
                     /protein_id="NP_001297574.1"
                     /db_xref="CCDS:CCDS79853.1"
                     /db_xref="GeneID:668923"
                     /db_xref="MGI:MGI:3651999"
                     /translation="MGVVTYDDVHVNFTQEEWALLDSSQKNLYRDVMLETYRNLAAIG
                     YSWEDHNPEEHFQSSRRHGRHEKSHIEEKPSEFTQCGKVFAYQSHPQGHQQIHTGEKP
                     YEVIQYLEAFAYHSSLQIHKRTHGGDKHYKINECGKAFACHNSLQRYKRVHTGEKLYE
                     CNQCGTDFAQHSHLQQHERMHTVKCKQSGKDFACYTNLQIYQRTHTGEKPYECIFCDK
                     TFIHHSHLERHERIHTGEKPYECNQCGKAFSQNSSLQLHKRTHTGEKPYECKQCGKSF
                     ACQSGLQQHKKTHHGEKSYECKRCGKAFACQSDLQQHKRTHTGEKSYECNQCDKAFAL
                     RCHLRRHQRIHTVEKPYKCNQCGKFFAQSNHFVRHKRTHTGEKPYECNQCDKAFACQT
                     SLLYHKRTHSGEKLYVCNECGKAFVLQSYLQIHKRTHTGEKPFGCDQCDKAFAQNSHL
                     LTHKRTHTGEKPYECEQCGKAFASNSNLQVHKKTHTGEKPYECKQCGKAFGFQSGLQK
                     HKRTHTGEKPYECNQCDKAFACQASLLNHKRSHTGEKPYECSECGKAFVLHSYLQIHK
                     RIHTGEKPFECDQCDKAFARNTLLLKHKRIHTGQKPYGCKQCGKAFANHSNLQVHKRT
                     HTGEKPYECKHCGKPFKCQSGLQYHKRTQHIQERNPMTVINVI"
     exon            101..227
                     /gene="Zfp442"
                     /gene_synonym="ZIPO-II"
                     /inference="alignment:Splign:2.1.0"
     exon            228..288
                     /gene="Zfp442"
                     /gene_synonym="ZIPO-II"
                     /inference="alignment:Splign:2.1.0"
     exon            289..7164
                     /gene="Zfp442"
                     /gene_synonym="ZIPO-II"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tttcctgcaa ggtcctcctc tctgaagctg agcaatctgg agtgtatctt cttggcgtgt
       61 tctgtgtgca ggctcagaca agctcagaag tcccgacatg ggtgttgtga cctatgatga
      121 tgtgcatgtg aacttcactc aggaagagtg ggctttgctg gattcttctc agaagaatct
      181 ctacagagat gtgatgctgg agacctacag gaatcttgct gctataggct acagttggga
      241 agaccataat cctgaagaac attttcaaag ttctagaaga catggaaggc atgaaaaaag
      301 tcatattgaa gagaaaccct ctgaatttac tcaatgtggt aaagtctttg cgtatcagag
      361 ccatcctcag gggcatcaac aaattcatac tggagagaaa ccctatgaag ttattcaata
      421 tcttgaggca tttgcatatc acagtagtct ccaaatacat aaaagaacac atggtggaga
      481 caaacactat aagattaatg aatgtggtaa agcctttgca tgtcacaatt ctcttcaaag
      541 gtataaaaga gttcatacag gtgagaaact ttatgaatgt aatcaatgtg gtactgactt
      601 tgcacaacac agtcatcttc aacagcatga aagaatgcat actgttaaat gtaagcaaag
      661 tggaaaagac tttgcatgtt atactaatct ccaaatatat caaagaacgc atactggaga
      721 gaaaccttat gaatgtatat tctgtgataa aacctttata catcacagtc atcttgaaag
      781 gcatgaaaga attcatactg gagagaaacc ctatgaatgt aaccaatgtg gtaaagcctt
      841 ttcacaaaac agcagtctcc aattacataa aagaacacat actggagaga aaccctatga
      901 atgtaagcaa tgtggtaaat cctttgcatg tcagagtggt ctccaacagc ataaaaaaac
      961 acatcatgga gagaaatctt atgaatgtaa acgatgtggt aaagcctttg catgtcaaag
     1021 tgatctgcaa cagcataaaa gaacacatac tggagagaaa tcctatgaat gtaaccagtg
     1081 tgataaagcc tttgctcttc gctgtcatct tcgaaggcat caaagaattc atactgtaga
     1141 gaaaccctat aaatgtaatc aatgtggtaa attctttgca caaagcaacc attttgtacg
     1201 acataaaaga acacatactg gagagaaacc ctatgaatgt aatcaatgtg ataaagcctt
     1261 tgcatgtcaa actagtctcc tgtatcataa aagaacacat tctggagaga aactctatgt
     1321 ctgtaatgaa tgtggcaaag cctttgtact tcaaagttat cttcagatac ataaaagaac
     1381 acatactgga gagaaaccct ttggatgtga ccagtgtgat aaggcatttg cacaaaacag
     1441 tcatctccta acacataaaa gaacacatac tggagagaaa ccctatgaat gtgagcaatg
     1501 tggcaaagcc tttgcaagta atagtaatct ccaagtgcat aaaaaaacgc acactggaga
     1561 gaaaccctat gaatgtaagc agtgtggtaa agcctttggg tttcaaagtg gtctgcaaaa
     1621 gcataaacga acacatactg gagagaaacc ctatgaatgt aatcagtgtg ataaggcatt
     1681 tgcatgtcaa gctagtctcc tgaatcataa acgatcacac actggtgaga agccatatga
     1741 atgtagtgaa tgtggtaaag cgtttgtact tcacagttat cttcaaatac ataaaaggat
     1801 acatactgga gagaaaccct ttgaatgtga ccaatgtgat aaagcctttg ctcgaaacac
     1861 tcttctccta aaacataaaa gaatacatac tgggcagaaa ccctatggat gcaagcaatg
     1921 tggcaaagcc tttgcaaatc acagtaatct ccaagtgcat aaaagaacac atactggaga
     1981 gaagccctac gaatgtaagc actgtggtaa acccttcaag tgtcaaagtg gtctgcagta
     2041 tcataaaaga acacaacaca tacaggagag aaaccctatg actgtaatca atgtgatcta
     2101 gtcttggcat gtcagacatc ttcagagcac taaagaaaca ttattgtata gaatctctgt
     2161 gagtatattt aatatggtga agcctttgta catttctatc gtcttcatct ttatgtaaga
     2221 aatccatact gaagggaaac tgtgaatgta cactaactac atcagatcaa gccttttcat
     2281 atttcacaag cctttgtcat catgaaataa ttcatactgg ggcaaaactt gaatatattt
     2341 aatatggtca aacatttgaa catttctgcc atcttcatca tcatgaaagt atttctcctg
     2401 gagagaaact ctatgactgt aatggatttg tgatatgtat agctgtcaca ctaacattca
     2461 gttataaaag attagacaaa aaaaagtgac aagtgccaac aatccattca agcattacga
     2521 tgtgatgtgc ctctttcttt tgtctgcact tgcaaacaca gtaaaccttg tttattttgt
     2581 ttgcacttat attcctcaac aattatatga aatagctcat ccaggtataa tgctttttat
     2641 tttgaaagat tttgagtagg tattgaaggt tgttctatgt tttgcaaata tatttacaaa
     2701 agtgcttttt atgtttctgt agtaaaacac tatgtctaaa gcagcttata aaagaggtta
     2761 acctagctca accaaaatag tcataagcag cagatggagg gagggagatg ggatggaatg
     2821 gcggcttcaa catcaggtgt ggagagaaca ggagagatgg ctagatggcc acgaatatga
     2881 atggaaatat acaatttatg ggagagaagg aaggggaaat ctacaggaaa agaaaaaaca
     2941 aaaaacaaaa aacaaaaaac actgggataa aggaggtacc caagaatcag tggagtttac
     3001 cctagctgtg agtcacgaaa ttggggtatg gaacctggag aggccgtctc ctgtagccag
     3061 gcaggaaccc cagtggagca atagagacac caacccaccc tcaaaagttt caaccctaaa
     3121 atcctgtcta caagaaatgc aggcaaagga ggtggagcag agacttaggg aatgtccaaa
     3181 cagctaactg aggggagttc tagagagtta agggaaggca caccacaatc ttgggtgttg
     3241 ccctacatgg gattagggcc ctggatgaat taaaaggaaa aaaaaaagga actaaagtta
     3301 aagcaagcac atcatcaata ttcactagta acttttacac attataacat ttatcctttg
     3361 tttccttcct cttttcatct tttctgtatt tcctccatca atacctgttg ccatctttta
     3421 cttccattct ctcttcttcc ttcctctctt tctttctctc tctttctttc tttctttctt
     3481 tctttctttc tttctttctt tctttctttc tttctttctt tctttctttc tctttctctt
     3541 tctttcctgt cttcatttac ttttggtttg tactgtagct aaggatgacc ttgaatgtct
     3601 gatcttctcc tcgctgcctg ctcttaggat gacaggcatg tcgtatttct ttgtttcttg
     3661 ccagttgttt tctcacagca acaacaaaat aaagtaaata tacacagctg tgctgagctc
     3721 tgctcttatt ataccttcca ggtttattgc agatcctcaa gtggttgaaa gtaggcacat
     3781 actttaaagc ctggatcttc tatatctggt tctgcccagt tctcttctgc ttctagtcag
     3841 gcagccacct tcctggggtt gtccctccca atatatctct tgtgttaggt ttgttgtgtg
     3901 atgtgacttt gaggcatttc ttggttgtct gttgccaggt gtactgcctg gttttgtgtg
     3961 tcaactggac acaagctgga gttatcacaa agaaaggagc ctcagatgag gaaatgcctc
     4021 catgagatcc agctgtaagg catttcatca attagtgatc aagtggggag ggcccattgt
     4081 gggtggtgct atccctggtt ctagtagtct tgggttctat aagagcaagc catgcaaacc
     4141 aggtgaagca agccaataaa gaacatccct ccacagcctc tgcatcagct cctgctttct
     4201 gacctgctta gttctagtcc tgacttcctt tggtgatgaa cagcatcatg gaagtgtaag
     4261 ctgaataaac cctttcctcc ccaacttgct tctcagtcac gatgttttgt gcaggaatag
     4321 aaatcctgac caagacattg ttggtaccag catagtgggg cattcctgtg acaacctgac
     4381 catgtttggg gaaggagtgt agaaggactt tggaactttg cactagaaga gctattggga
     4441 tgctaagaac tctgtggaat gttctgtagg agcttggaag ataaccttga gaacagtgca
     4501 gaagatggag acctggcttg tgaaattact gagggaagat taaagtctct tatggattgt
     4561 tgctattttg attgtgaaga ttctgtggtt ctggttatct ggggctgaag aatcagctgt
     4621 gataaacaag ataccagaac tactaaattg aaaactttgc attactggga ctattgatgc
     4681 tggttagctt cagctaagaa attagtgatg attaggaaga gaccagcatc attgaggtaa
     4741 aaacttctgg aaagtgtttt cgcagagcac aaagaggctg tgttccagat agagccaagg
     4801 ttgttctacc tactgctgca gctggacatg gtaatgtgta agaatcactc aggtggtaat
     4861 aggttttgaa ggggtcatga agagcagctg agactcagca ctgtgaggcc atggaaggcc
     4921 attggtgaag gtgcagcctc agttgcaatt gatggcccag aactgaaggg gtcttgcaaa
     4981 ggagttgaat cttggaaccg tgaagagctc ctataatagg cttttggcaa agcctagttg
     5041 cagctgaaga caacagtgtt ttggagatgc caataccatg agatgaccac caagaacagc
     5101 agcagcattg gagtacaggc agctggaacc taaaagacaa ggtgtgtgct acaaaggtca
     5161 gaactggaga tgtgacctaa gcccctggag gagcctagaa gattgtgagt gcatctcaga
     5221 cattggatgg ttggagtttg attttatttt ttatagtgac tgtgccctga tattttttcc
     5281 tcttgaagga agaaggtatt tcagtggaac ccatagttaa gagacttgga atttttaaga
     5341 ctttgaattt taaaagatat tggatatttt taagggattg ttctttttaa tatgtaaaga
     5401 ctgtaggact tttaaagtta tttatatctt gaggatgaat aagaaagtaa aggttgaggc
     5461 ttaatagtga tgtgtttgtg tttcaagttg acaagggatc agttgtactg gctgattttg
     5521 tgtgtcaatt tgacacaagc tggagttatc aaagagaaag gagcttcagt tggggaagtg
     5581 gctccatgag atccagctgt ggggcaattt cttaattagt gatgaaaagg agagggcccc
     5641 ttgtgggtgg taccatctct gggctggtaa tattggattc tataagaaag caagctgaga
     5701 aagccagagg aaacaggcca ataagtaaca tccctccatg gcctctgcat cagctcttgc
     5761 ttcctgacct gcttagttct attcctgact tcctttggtg atgaaaagca acatggagcc
     5821 gggtgtggtg gcgcacacct ttgatcccag cacttgggag gcagaggcag acgaatttct
     5881 gagttcaacg ccagcctggt ctacaaagtg agttccagga cagccagggc tacacagaga
     5941 aaccctgtct caaaaaaaaa agaaaagaaa aaaagaaaag caacatggaa gtataagctg
     6001 aataaaccct ttcttcccca acttccttct cagtcatgat gttttgtgca ggaatagaaa
     6061 cactgactaa gacaccacaa tactttcagg agtagagctg taacacagca gagctgttaa
     6121 taccttcact gggtaaacct tcccaggcag gagcagagct gtaacagttt ctctggaact
     6181 ttccccttgc cacaacagag ctgtaacact ttctctggga aaccatcctc atgcagagca
     6241 gagatgtttc agttgtatgg gggaaacttt ccttgcagtt gagcagagct tgtaaagggg
     6301 aaactgttcc cttcagagcg gcaatactta catgtgtatg tcctgtcttt atgagagctc
     6361 gcatatattc tgttgttctt gtatttctct atgaagattt ttagaattgt atctatgtgt
     6421 cgtcttagta ttttgtgaac actgtggtat ccaatacttc tcaattccga gaattgtacc
     6481 ttcattgaca tgccaaatat atcctagcct ccatgtctgg ccgtctaggt actgacattg
     6541 acaccatcct gctgctaagc taacctctct taaatttcct ttctccttcc tttattccca
     6601 ccaaagaatt tctttgtgcc tcttagtaca tgccattaca tcagcagtgt ttccttcatc
     6661 tgtttaaaat aacttatagt tgacttaaag attcatgcaa ttcacagaaa ctgataactc
     6721 cgatttcatt tcaatcagaa atttacttac tttctatctg tacaaatgca tttacataaa
     6781 aatggcatat atcctattga taagcatgta aatacctgga agtcaagtaa tatggaatag
     6841 aaatcatttg taaaagtcac ataactgttt tagaatttca gcattatatt taacattcac
     6901 agttggcatt tgaaaaactt ctctgaatgt gttctaatca catacaagat ggaaatatag
     6961 aaatgggcat attttacctt acaattggtg ggtcttttac aattagggat aacatgtcaa
     7021 atttaaataa agtgatcgaa ttttattttg tttataaaat gtgtatcgca aattttaaaa
     7081 gtacaactag agaatggaag gtttttatat attctgatgt gattgctaaa gtatgggaac
     7141 aataaaaatt gtatatacat ttaa
//
