LOCUS       NM_026712               1145 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus zinc finger protein 414 (Zfp414), transcript variant
            1, mRNA.
ACCESSION   NM_026712 XM_993475
VERSION     NM_026712.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1145)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1145)
  AUTHORS   Clemens,R.A., Newbrough,S.A., Chung,E.Y., Gheith,S., Singer,A.L.,
            Koretzky,G.A. and Peterson,E.J.
  TITLE     PRAM-1 is required for optimal integrin-dependent neutrophil
            function
  JOURNAL   Mol Cell Biol 24 (24), 10923-10932 (2004)
   PUBMED   15572693
REFERENCE   3  (bases 1 to 1145)
  AUTHORS   Abe,K., Yuzuriha,M., Sugimoto,M., Ko,M.S., Brathwaite,M., Waeltz,P.
            and Nagaraja,R.
  TITLE     Gene content of the 750-kb critical region for mouse embryonic
            ectoderm lethal tcl-w5
  JOURNAL   Mamm Genome 15 (4), 265-276 (2004)
   PUBMED   15112104
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY737447.1, BC119044.1 and AI844570.1.
            
            On Jul 20, 2010 this sequence version replaced NM_026712.2.
            
            Transcript Variant: This variant (1) encodes the functional
            protein.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK002706.1, BC116933.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-27                BY737447.1         2-28
            28-1097             BC119044.1         1-1070
            1098-1145           AI844570.1         1-48                c
FEATURES             Location/Qualifiers
     source          1..1145
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 17.98 cM"
     gene            1..1145
                     /gene="Zfp414"
                     /gene_synonym="0610030H11Rik; Znf414"
                     /note="zinc finger protein 414"
                     /db_xref="GeneID:328801"
                     /db_xref="MGI:MGI:1915641"
     exon            1..125
                     /gene="Zfp414"
                     /gene_synonym="0610030H11Rik; Znf414"
                     /inference="alignment:Splign:2.1.0"
     CDS             123..1022
                     /gene="Zfp414"
                     /gene_synonym="0610030H11Rik; Znf414"
                     /note="zinc finger, C2H2 type containing protein"
                     /codon_start=1
                     /product="zinc finger protein 414"
                     /protein_id="NP_080988.1"
                     /db_xref="CCDS:CCDS37568.1"
                     /db_xref="GeneID:328801"
                     /db_xref="MGI:MGI:1915641"
                     /translation="MEEPSRPSSDTLTTVESSSGEPDKEVASPDGAAPATFSSVEEPS
                     PNPTAMPPVWDHGGPLQQVAYPASDSCQTGSTNTGVGTNEDLRLPRRRPPPGKQIPCS
                     SPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTESFPSMQELVAHGKLHY
                     KPNRYFKCENCLLRFRTHRSLFKHLHVCIDHGQNPAPPPPPALDKEPPVPERPPESDP
                     SSSLGLPFPLLEPFTSAPTGPFLPYLNPAPFGLSPPRLRPFLAATPGPPASSTAIWKK
                     SQGATSSPRRPQGGSDAPSGACR"
     exon            126..408
                     /gene="Zfp414"
                     /gene_synonym="0610030H11Rik; Znf414"
                     /inference="alignment:Splign:2.1.0"
     exon            409..516
                     /gene="Zfp414"
                     /gene_synonym="0610030H11Rik; Znf414"
                     /inference="alignment:Splign:2.1.0"
     exon            517..622
                     /gene="Zfp414"
                     /gene_synonym="0610030H11Rik; Znf414"
                     /inference="alignment:Splign:2.1.0"
     exon            623..957
                     /gene="Zfp414"
                     /gene_synonym="0610030H11Rik; Znf414"
                     /inference="alignment:Splign:2.1.0"
     exon            958..1132
                     /gene="Zfp414"
                     /gene_synonym="0610030H11Rik; Znf414"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1109..1114
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp414"
                     /gene_synonym="0610030H11Rik; Znf414"
                     /note="hexamer: AATACA"
     polyA_site      1132
                     /gene="Zfp414"
                     /gene_synonym="0610030H11Rik; Znf414"
                     /note="major polyA site"
ORIGIN      
        1 gagatctgag aagcgggaaa atggcgccga tgtgagcgag agaccgtgtc gccgaggaag
       61 acgcccctgc tggagccaga gcctccgaag gcacgggaac cagaggtgta actgagtaga
      121 ggatggagga accatccagg cccagctcgg acacgctgac cactgtagaa tccagctccg
      181 gtgagccaga caaggaggtg gcatctccag atggggcagc tccagccact ttttcctccg
      241 tggaggagcc cagccctaac ccaacagcca tgccaccagt gtgggaccat ggaggacctc
      301 tgcagcaagt tgcctatcca gcctcagaca gttgccagac tggctcaacc aacacaggcg
      361 tggggaccaa tgaggacctt cggttgccca gacgccgtcc accgccaggg aaacaaatac
      421 cctgctctag ccccggctgc tgcctcagtt tccccagtgt tcgtgatcta gcacagcatc
      481 tccgtaccca ctgcccaccc acacagtcac tggaaggcaa actcttccga tgctccgcgc
      541 tgagctgcac tgagagtttc cccagcatgc aggagctggt agcccacggc aagctgcatt
      601 acaagcccaa ccgctacttc aagtgtgaga attgcctcct gcgcttccgc actcaccgtt
      661 cactcttcaa gcatctgcat gtttgtatag accatggtca gaacccagcc ccgccaccac
      721 cccctgccct ggacaaagag ccacctgtac ccgagcgtcc cccagagtcc gacccttcgt
      781 cttccctggg cctgccattc ccactacttg agccttttac ctctgccccc actgggccct
      841 tccttccata cttgaaccct gcaccctttg gcctgagtcc ccctcgactg cgcccattcc
      901 tggctgccac tccagggcca ccagcatcca gcactgccat ctggaagaag agtcaaggcg
      961 ctaccagtag tcccagaaga cctcagggtg gctctgatgc gccctcaggt gcgtgcaggt
     1021 gaccaccagg gcagggtgga ggggccttca ttcctatgcc ctgtgtgggc cttgcgaatg
     1081 ctggaaagca gcagtgcctg tcccttaaaa tacatgattt ttacctttaa aaaaaaaaaa
     1141 aaaaa
//
