LOCUS       NM_144833               3306 bp    mRNA    linear   ROD 08-JUN-2024
DEFINITION  Mus musculus zinc finger protein 410 (Zfp410), transcript variant
            1, mRNA.
ACCESSION   NM_144833 XM_993852
VERSION     NM_144833.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3306)
  AUTHORS   Vinjamur,D.S., Yao,Q., Cole,M.A., McGuckin,C., Ren,C., Zeng,J.,
            Hossain,M., Luk,K., Wolfe,S.A., Pinello,L. and Bauer,D.E.
  TITLE     ZNF410 represses fetal globin by singular control of CHD4
  JOURNAL   Nat Genet 53 (5), 719-728 (2021)
   PUBMED   33859416
REFERENCE   2  (bases 1 to 3306)
  AUTHORS   Campbell,G.R., Baudhuin,A., Vranizan,K. and Ngai,J.
  TITLE     Transcription factors expressed in olfactory bulb local progenitor
            cells revealed by genome-wide transcriptome profiling
  JOURNAL   Mol Cell Neurosci 46 (2), 548-561 (2011)
   PUBMED   21194568
REFERENCE   3  (bases 1 to 3306)
  AUTHORS   Guo,G., Huss,M., Tong,G.Q., Wang,C., Li Sun,L., Clarke,N.D. and
            Robson,P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
REFERENCE   4  (bases 1 to 3306)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   5  (bases 1 to 3306)
  AUTHORS   Pritsker,M., Doniger,T.T., Kramer,L.C., Westcot,S.E. and
            Lemischka,I.R.
  TITLE     Diversification of stem cell molecular repertoire by alternative
            splicing
  JOURNAL   Proc Natl Acad Sci U S A 102 (40), 14290-14295 (2005)
   PUBMED   16183747
REFERENCE   6  (bases 1 to 3306)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   7  (bases 1 to 3306)
  AUTHORS   Benanti,J.A., Williams,D.K., Robinson,K.L., Ozer,H.L. and
            Galloway,D.A.
  TITLE     Induction of extracellular matrix-remodeling genes by the
            senescence-associated protein APA-1
  JOURNAL   Mol Cell Biol 22 (21), 7385-7397 (2002)
   PUBMED   12370286
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CK791111.1, AK132345.1, AK051939.1 and AC159649.3.
            
            On Jun 12, 2018 this sequence version replaced NM_144833.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK132345.1, AK083003.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-263               CK791111.1         1-263
            264-1634            AK132345.1         2-1372
            1635-2939           AK051939.1         1035-2339
            2940-2940           AC159649.3         195289-195289
            2941-3306           AK051939.1         2341-2706
FEATURES             Location/Qualifiers
     source          1..3306
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 39.15 cM"
     gene            1..3306
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /note="zinc finger protein 410"
                     /db_xref="GeneID:52708"
                     /db_xref="MGI:MGI:1289280"
     exon            1..316
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            317..496
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     CDS             464..1900
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /note="isoform 1 is encoded by transcript variant 1;
                     another partner for ARF 1; zinc finger protein APA-1"
                     /codon_start=1
                     /product="zinc finger protein 410 isoform 1"
                     /protein_id="NP_659082.1"
                     /db_xref="CCDS:CCDS26042.1"
                     /db_xref="GeneID:52708"
                     /db_xref="MGI:MGI:1289280"
                     /translation="MLSDELESKPELLVQFVQNTSIPLGQGLVESEAKDITCLSLLPV
                     TEASECSRLMLPDETPNHANSSKEVPSSAVLRSLQVNVGPDGEETRAQTVQKSPEFLT
                     TPESPSLLQDLQPSDSTSFILLNLTRAGLGSSAEHFVFVQDETEDSGADFLSAESTDS
                     SIPWFLRVQELAHDSLIAATRAQLAKNAKTGSNGENVHLGSGDGQPKDSGPLPQAEKK
                     LKCTVEGCDRTFVWPAHFKYHLKTHRNERSFICPAEGCGKSFYVLQRLKVHMRTHNGE
                     KPFMCHESGCGKQFTTAGNLKNHRRIHTGEKPFLCEAQGCGRSFAEYSSLRKHLVVHS
                     GEKPHQCQVCGKTFSQSGSRNVHMRKHHLQLGTTGSQEQDQTAEPLMGSSLLEDASVP
                     NKNLVSMNSQSSLGGESLNLSNTNSILGVDDEVLTERASRPLSSVPDVTHHLVTMQSG
                     RQSYEVSVLTAVNPQELLNQGDLTERQT"
     exon            497..632
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            633..851
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            852..1043
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            1044..1194
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            1195..1376
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            1377..1466
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            1467..1592
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            1593..1733
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            1734..1861
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     exon            1862..3306
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2570..2575
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /note="hexamer: AATAAA"
     polyA_site      2591
                     /gene="Zfp410"
                     /gene_synonym="Apa1; D12Ertd748e; Znf410"
                     /note="major polyA site"
ORIGIN      
        1 aaccctgaag ggcagacagg aggggacggg gcgctgcggt tcctcggccg ggagggaacc
       61 ctgtgtgtgt ctcgggctgt gtatgcgtgt gtatgtagcg gggagcgaag gatcgctctc
      121 aagcagcggc ccaagagtca gcgcctcctc ctgagaaaca cccgcgggcg gagaagaaag
      181 cgagtgggta tgttgatggg gggcggccaa acttcctgtc ccgctctgga gctgcttccg
      241 gcgggagccg gaagacgccg tgtgtggacg ggattcgggg ctgactgacg gacggacggc
      301 tgcccgagac tggaaggtta aattgattac caacctagtt cagcatctta caggaaaagt
      361 gtaatgcttt ttaaagggat atgaatataa caggaaggtg tcattgactg aattagactt
      421 gaacctgtcc ctgatcagct acaggatttc agaagctgaa tcaatgttat cagatgagtt
      481 agaatccaaa ccagagctcc tggttcagtt tgttcagaat acctccatcc ccctgggaca
      541 agggctagta gaatcagaag ctaaagacat tacttgctta tccctccttc cagtgaccga
      601 ggcctcagaa tgcagccgac taatgttacc agatgaaact ccaaatcatg ctaattcctc
      661 caaggaggtc ccttcttcag ctgttttgag gagccttcag gtgaatgtgg gcccagacgg
      721 agaagagaca agggctcaga ctgtacagaa gtccccagag ttcctgacca caccagagtc
      781 gcctagcttg ttgcaagatc tacagccaag tgatagcact tccttcattc ttctgaacct
      841 aacgagagca gggctgggct cttcagctga gcactttgtg tttgttcagg atgagacaga
      901 ggactcaggg gctgacttcc tctctgctga gagcacagac agcagtatcc catggttcct
      961 ccgggttcag gaactggccc atgacagtct gattgcggct actcgtgcac agctggccaa
     1021 gaatgcaaaa actggcagca atggagaaaa tgtccacctt ggctctggtg atgggcaacc
     1081 aaaagactct ggtccccttc ctcaagcgga gaagaagctc aagtgcacag ttgaaggctg
     1141 tgaccggaca tttgtgtggc cagctcactt caagtaccac cttaaaactc accgaaatga
     1201 gcgctccttc atctgccctg cagaaggttg tgggaaaagc ttttatgtgc tgcagaggct
     1261 gaaggtgcac atgaggacac acaatgggga gaaacccttt atgtgccacg agtctgggtg
     1321 tggtaagcag ttcactacag ctgggaacct gaagaaccac cggcgcatcc acacaggaga
     1381 gaagcctttt ctctgtgaag cccagggatg tggccgttcc tttgctgagt attcaagcct
     1441 ccggaaacat ctggtagttc actcaggtga gaagcctcat cagtgccagg tctgtgggaa
     1501 gaccttctct cagagtggga gtaggaatgt gcatatgaga aagcatcact tgcagctggg
     1561 gacaactggg agtcaagaac aggatcaaac cgccgagcca ctaatgggca gtagtttgct
     1621 tgaagacgct tcagttccca ataaaaacct ggtgtctatg aattcccagt ccagccttgg
     1681 tggagagtcc ttgaatctat caaataccaa ttctatcctt ggagttgatg atgaggtgct
     1741 tactgaaaga gcctcacggc ccctgtcttc tgtgcctgat gtgacacatc acttggtgac
     1801 catgcagtca gggaggcagt cctatgaagt ttctgtctta actgcggtaa atccgcagga
     1861 gttactaaac caaggagatt taactgaaag acagacatga gtgtgctgac tcctggagat
     1921 gctgttgtct gatcccagag tgcatgatgg gaacagatcc aaaggctcat aatctgccag
     1981 aactaaaagg agtctgaagg accaagacct tgccttgcct ctgttgtctg agggctctct
     2041 tcaacctcca ccgatgcagt ccaagagtga agcagtggcc gtgggctgga tacctgtgcc
     2101 gcctctctcc tcagcgcagc gtttgggagt agacttgcca agagcaggtt taattatgtg
     2161 ttggctgaag attttcattg tgactgtcaa ggttttcctt tgaagagttt tcaccctagg
     2221 cccagctatc tttccatatg gttgaattat gtcctgcttc caaccagaac actgagtttt
     2281 caagatgcct tgttgctttg aagaagggag gggtgccaat tacactgtag cattgcactc
     2341 tccctttagc aacctgagta agacttagcc tttgggctgt aaaaattaaa ttacttgaat
     2401 ctctccttgg cccaggctga ggtaccaact taccctgtac actttgactt ggtcattttt
     2461 ttgttttgtt tatgggactt aaaatagcat gttatcaggg ggttttattt gttgttgttg
     2521 ttttttttta agttaaaaac cacatgatct agagtttgtt ttccttttaa ataaacaaaa
     2581 caacctagtc acctctttgg ctcttgtttt agattggtga ttcttaacct tctcaatgct
     2641 gccacccttt aatgcagttt ctcatgttgt ggtgaccccc aaccataaga tgattttcat
     2701 tgctacttca taactgtaat tttgctactg ttacaaatca taatgtaaat atctgatata
     2761 taggatatct gatatgtgat aggttgagaa ccgctgtttt agacagatgt ggggcatttt
     2821 tgttgttggt ttggtttggg tttttttcaa gacaaagttt ctttgtgtag ctttggctgt
     2881 cctggaactc attctgtatt ccaggctggc cttgaactct gcctcctgag tgctggaaca
     2941 aaaggcgtac acacaccacc acttcttcgt aacagatgtg ttcttagagg tcaagaagtt
     3001 tatccagtct ttctctttta agatagaata ttaaatagag aaaggaggct aaggatagga
     3061 tagtagctta tgcctctagt cccaggactc aggggctgag gcaggcagat cacaggacta
     3121 tgagacccgc cttgacacat aacaagttct acacagcaag acactgtgtt aaaaaaatta
     3181 agggagaccc tgatgagcca ggtcccccag catgcaggga acaaacaaat ttcttggatt
     3241 tgatgccagc ctgatgtata taggaagttc tagatcaaca agggctatac attaagaatt
     3301 tgtctc
//
