LOCUS       NM_001347175            4378 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus zinc finger protein 408 (Zfp408), transcript variant
            1, mRNA.
ACCESSION   NM_001347175 XM_006499831
VERSION     NM_001347175.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4378)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 4378)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 4378)
  AUTHORS   Ingham,N.J., Pearson,S.A., Vancollie,V.E., Rook,V., Lewis,M.A.,
            Chen,J., Buniello,A., Martelletti,E., Preite,L., Lam,C.C.,
            Weiss,F.D., Powis,Z., Suwannarat,P., Lelliott,C.J., Dawson,S.J.,
            White,J.K. and Steel,K.P.
  TITLE     Mouse screen reveals multiple new genes underlying mouse and human
            hearing loss
  JOURNAL   PLoS Biol 17 (4), e3000194 (2019)
   PUBMED   30973865
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 4378)
  AUTHORS   Dickinson,M.E., Flenniken,A.M., Ji,X., Teboul,L., Wong,M.D.,
            White,J.K., Meehan,T.F., Weninger,W.J., Westerberg,H., Adissu,H.,
            Baker,C.N., Bower,L., Brown,J.M., Caddle,L.B., Chiani,F., Clary,D.,
            Cleak,J., Daly,M.J., Denegre,J.M., Doe,B., Dolan,M.E., Edie,S.M.,
            Fuchs,H., Gailus-Durner,V., Galli,A., Gambadoro,A., Gallegos,J.,
            Guo,S., Horner,N.R., Hsu,C.W., Johnson,S.J., Kalaga,S., Keith,L.C.,
            Lanoue,L., Lawson,T.N., Lek,M., Mark,M., Marschall,S., Mason,J.,
            McElwee,M.L., Newbigging,S., Nutter,L.M., Peterson,K.A.,
            Ramirez-Solis,R., Rowland,D.J., Ryder,E., Samocha,K.E.,
            Seavitt,J.R., Selloum,M., Szoke-Kovacs,Z., Tamura,M., Trainor,A.G.,
            Tudose,I., Wakana,S., Warren,J., Wendling,O., West,D.B., Wong,L.,
            Yoshiki,A., MacArthur,D.G., Tocchini-Valentini,G.P., Gao,X.,
            Flicek,P., Bradley,A., Skarnes,W.C., Justice,M.J., Parkinson,H.E.,
            Moore,M., Wells,S., Braun,R.E., Svenson,K.L., de Angelis,M.H.,
            Herault,Y., Mohun,T., Mallon,A.M., Henkelman,R.M., Brown,S.D.,
            Adams,D.J., Lloyd,K.C., McKerlie,C., Beaudet,A.L., Bucan,M. and
            Murray,S.A.
  CONSRTM   International Mouse Phenotyping Consortium; Jackson Laboratory;
            Infrastructure Nationale PHENOMIN, Institut Clinique de la Souris
            (ICS); Charles River Laboratories; MRC Harwell; Toronto Centre for
            Phenogenomics; Wellcome Trust Sanger Institute; RIKEN BioResource
            Center
  TITLE     High-throughput discovery of novel developmental phenotypes
  JOURNAL   Nature 537 (7621), 508-514 (2016)
   PUBMED   27626380
  REMARK    Erratum:[Nature. 2017 Nov 16;551(7680):398. PMID: 29144450]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL691489.21.
            
            On Aug 1, 2022 this sequence version replaced NM_001347175.2.
            
            Sequence Note:.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660821.183569.1,
                                           SRR13948564.3343248.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-72                AL691489.21        189749-189820       c
            73-347              AL691489.21        189196-189470       c
            348-409             AL691489.21        188061-188122       c
            410-660             AL691489.21        187641-187891       c
            661-4378            AL691489.21        182801-186518       c
FEATURES             Location/Qualifiers
     source          1..4378
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 50.63 cM"
     gene            1..4378
                     /gene="Zfp408"
                     /gene_synonym="Gm1011"
                     /note="zinc finger protein 408"
                     /db_xref="GeneID:381410"
                     /db_xref="MGI:MGI:2685857"
     exon            1..72
                     /gene="Zfp408"
                     /gene_synonym="Gm1011"
                     /inference="alignment:Splign:2.1.0"
     exon            73..347
                     /gene="Zfp408"
                     /gene_synonym="Gm1011"
                     /inference="alignment:Splign:2.1.0"
     exon            348..409
                     /gene="Zfp408"
                     /gene_synonym="Gm1011"
                     /inference="alignment:Splign:2.1.0"
     exon            410..660
                     /gene="Zfp408"
                     /gene_synonym="Gm1011"
                     /inference="alignment:Splign:2.1.0"
     exon            661..4378
                     /gene="Zfp408"
                     /gene_synonym="Gm1011"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3579..3584
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp408"
                     /gene_synonym="Gm1011"
                     /note="hexamer: AATAAA"
     polyA_site      3602
                     /gene="Zfp408"
                     /gene_synonym="Gm1011"
                     /note="major polyA site"
     regulatory      4310..4315
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp408"
                     /gene_synonym="Gm1011"
                     /note="hexamer: ATTAAA"
     polyA_site      4337
                     /gene="Zfp408"
                     /gene_synonym="Gm1011"
                     /note="major polyA site"
     regulatory      4356..4361
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp408"
                     /gene_synonym="Gm1011"
                     /note="hexamer: AACAAA"
     polyA_site      4378
                     /gene="Zfp408"
                     /gene_synonym="Gm1011"
                     /note="major polyA site"
ORIGIN      
        1 agtggcgaga gaatctctgt cccacgatga aggaggtgga ggaggtgatc ttggggaaaa
       61 tagagccgca ccccccagag ccacccctgg gccaggattc aggatggagc ccttccggaa
      121 aaggctttgc tccgggcctc aaagcctgcc cgccgggtac gagccctgcc atccttgttc
      181 taaggagcct cccccagggc ttggccgtgg gcccctcgag atccaggaat cagcacttgg
      241 gggtctggtg tgtaggagca cccctgcagc ccggcctgca ttggggacct ctggaagatg
      301 agtccgtcct ggagaagggc gagggaatga agacaccgca cgaggaggac ttctcgttag
      361 ccccgtgcgg agccatctgt ccccggcagc aaagttccac ttggaccagt ttggtgcagg
      421 agggaagact gcagagtgat ggcaatgcgt ccttggtctg gatcagggag aagctacacc
      481 tgcaggtgga ccagactata ctgccaggct ttgagttgct gctgcgccca cagtctccgc
      541 agaagagtct aagtgtcctg caccccaagc tggaggaaga agtagctgag acaggagagg
      601 cgtctgctac acaggaagag gtggcctccc cgcaagagga ttcagcaggg ttttgcacag
      661 atcctggtca cgagtcatcc catagtatcc aagaagacaa tatgctagtc tctgaatctg
      721 tgaccaaaac cgaagagcaa cttttcaagg atagccaacc cattggcctg ttgcttcacg
      781 atgacagcat ggataaacag tgcctaccac agactccacc tgagcctcag agcacctcag
      841 ctgcccagaa gagcccagag agcagtgaag ccggtttatt tcctcctgag ggtgcccagg
      901 tggagacctg cccggccaag cagttagatg tccccagcag tcagtgcccg tctatagccc
      961 agacctcaga gcctggaacc cagctccctg acctgtctgg gctgctctgc agccctctgg
     1021 acccagcagg aagctcctca aagctgggcc gacgctaccg gtgtggggag tgtagcaagg
     1081 cattcctaca gctgtgccat ctgaagaagc acgcgtttgt gcacacagac cacaagcctt
     1141 tcctgtgcac cgagtgtggc aagagctaca gctctgagga aagcttcaaa ggccacatgc
     1201 tgggccaccg tggtgtacgg cccttccctt gctctcagtg tgacaaggcc tatggtaccc
     1261 gcagagacct cagggaacat caggtggtcc actcaggtgc ccggcccttt gtgtgtgagc
     1321 aatgcggcaa aacctttgcc cgccgacctt ccctgcggct acaccgaaag acccaccaga
     1381 tgccagatgc cccttcacca tgcccatgcc cagtgtgtgg acggctcctg gccacccggg
     1441 gttccctgcg gaatcacatg aggctccaca ctggtgagaa accctacctg tgcccccact
     1501 gtggccaagc attccgccag cggggcaacc tccaaggaca cttgcggcta cacacaggag
     1561 agcgccccta ccagtgccca cattgtgcca atacttaccc ccagctgcct gaactgcggc
     1621 gccatctcat ctcccacact ggagaggcct acctgtgccc cgtgtgtggg aaggccctgc
     1681 gagacccaca tacactccgt gctcatgagc gcctacactc aggggagagg ccctttcgct
     1741 gtccccagtg tgaccgagct tacacactgg ccaccaagtt gcgccgccac ctcaagtccc
     1801 acatgacaga caagccatac cagtgcccca tctgtggcat gggctatgtt ctccctcaca
     1861 gcctcaagcg gcaccagctc agtcaccagt gtggggtttc atccagccct tctctgcctc
     1921 ctgctgcctc tgagccccct atggtgctcc tccagagtga gccggaactg ctggacactt
     1981 gtagccaaca ggaagtgccc ccaggtgagg gtattgtgga ggtcaccatc tctgaaagcc
     2041 aggaaaagtg ctttatagta ccagagcagc cagcccctag ccccagcctg gtcctgatcc
     2101 acaaggacgt gggctttcgt ggctgggccg aggtggtaga agcagaagca ggcacctgac
     2161 gccctcatca cccttccttt acccctgcaa gagctccccg tgaagactgg tgcagcagag
     2221 cgggtgtcat tcattctctt tgggtctcca gagaggtgca ggaacccagc tgactggctt
     2281 cttggggtca atccacacat cacatgccct ctgtagttca ggttttaatt cagttggttg
     2341 ctttcataga tgaagttcgt caaagctaaa ggagacagtg tagggagatg ggtggggtgg
     2401 gatttgtgca ctctgtaggc ttgggcacag ggaagctatg aggtcttaac acgatttgcc
     2461 tgtgaagtct gtgagcctag acaatgtgag atgttgggga tgagccagac aggctcatag
     2521 tgacacaccc ctggtatccc agcacacaaa cagaggcaga agggttgcct caagtctgag
     2581 gccatcatgg actgtgtaag cagacctatc tcagggaggg agggagaaga ggttggcctt
     2641 tacaaagcct gtgattcact gagctgtagg gatagatcag aaataaatgc gtaggctgag
     2701 tgtgtcagct cacacctaga atccctgcct tagaagcaca agttaaagac ctacctgcct
     2761 acccttagga agaagaaaaa ccattggata tgagttcaga ggggacatgg gagttgttac
     2821 gatagggtga tgtgatctgg gtggtgccaa gggcctcccc agcggtgaca acaggagcat
     2881 actttgagcc aggctttgat gagtgaacgc gcgcatgcgc gtgtgtgtgt gtgtgtgtgt
     2941 gtgtgtgtgt gtgtaagcag tgtttctttt ttaaacaaat agacaagtat aaagcacttt
     3001 aactattctc ccatagccac aaagctaccc gagggctgag tttagagtct gcctgttgca
     3061 ctcgtgctga cggtcggctc ccagcactgg tgctgcacta tcttggtctg cctgttcttg
     3121 gtaggtggat ggattttcaa gcggtgagaa gcaggaatgg acatgtaatt ctaaagaggt
     3181 ggtcgggaga tgccttagtg aagtgagagt gctatgagta ccagagtagg cagtgagctg
     3241 gggaagggct gggtgctagg tggagtaaag aagataaaag ctgggcctgg agagctgcct
     3301 cggaggttaa gaacacttcc agaggtcctg agttcaattc ccagcaacca catggtggct
     3361 cacaaccatc tgtaatggga tccaatatcc tcttttggtg tgtctgaaga cagctacagt
     3421 gtattcatga acataaaata aatcttaaaa aaaaaaaaga caaaagccag tgtggccact
     3481 tgcatctcaa actacaaaag gaccttctct aggacagtgt tttttttttt tttttttttc
     3541 tgagttaaac tagccatgtt gcactgtttt tgttttttaa taaattgaat cctgagtatc
     3601 tatatggtat aaagagaact ggctctccca cctagagcaa gcagcagagg gactgaggta
     3661 gaccagggag gtgaggacag ggagaagtta cgttcctgaa gtcaagtgtc aggtaggtat
     3721 gttctctggg aggcacaagg gacagagttc agagctggtg gctgggagaa cagtttaagt
     3781 tctcccaagt ctcagccatg catttaagat ttgggctgag gtaggcttta agaaacaagc
     3841 agttggtggg aggagctggg taactaagca acagggccct gaaggccaca gtggctttac
     3901 tccagttagt aagaggggag gcttataagg ggagtaaagg tggagccatc aaatggaaga
     3961 gagaaacctg agaagtgtca ctagaactaa aggaggagtg tcccaggggt ggtcaatgct
     4021 gacactggct tgggtgttga gacctgtgaa gtgagctgaa ccgggagggg ttatggttta
     4081 taagtgcttg gcccagggag tggcaccatt agaaggtgtg gccctcttgg actaggtgtg
     4141 tcactgtggg tgtgggcttt aaccctcttc ctagctgctt ggaagccagt cttctgctat
     4201 cagccttcag atgaagatgt agagcccctc tgctcctcct gcaccatgct tacctggatg
     4261 ctgccatgtt cctgccttga taatggactg aacctgtaag ccggccccaa ttaaacagga
     4321 tgtattgatt gtctttatat gtaagtgtgc tgtggaacaa atggaaatca aaactgga
//
