LOCUS       NM_027007               5487 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus zinc finger protein 397 (Zfp397), mRNA.
ACCESSION   NM_027007 XM_001473060 XM_001475002
VERSION     NM_027007.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5487)
  AUTHORS   Guo G, Huss M, Tong GQ, Wang C, Li Sun L, Clarke ND and Robson P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK032001.1, AY338468.1 and AC126807.4.
            
            On or before Aug 23, 2009 this sequence version replaced
            XM_001475002.1, XM_001473060.1, NM_027007.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK032001.1, BC021456.2 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-330               AK032001.1         4-333
            331-1977            AY338468.1         155-1801
            1978-5487           AC126807.4         87460-90969
FEATURES             Location/Qualifiers
     source          1..5487
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="18"
                     /map="18 12.44 cM"
     gene            1..5487
                     /gene="Zfp397"
                     /gene_synonym="2810411K16Rik; 6720480F11Rik"
                     /note="zinc finger protein 397"
                     /db_xref="GeneID:69256"
                     /db_xref="MGI:MGI:1916506"
     exon            1..174
                     /gene="Zfp397"
                     /gene_synonym="2810411K16Rik; 6720480F11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            175..689
                     /gene="Zfp397"
                     /gene_synonym="2810411K16Rik; 6720480F11Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             276..1859
                     /gene="Zfp397"
                     /gene_synonym="2810411K16Rik; 6720480F11Rik"
                     /codon_start=1
                     /product="zinc finger protein 397"
                     /protein_id="NP_081283.2"
                     /db_xref="CCDS:CCDS29096.1"
                     /db_xref="GeneID:69256"
                     /db_xref="MGI:MGI:1916506"
                     /translation="MAVESRAISTLKPQDHQEELILVKIEDSSFSWSQKCKQNGSAQS
                     CQELFRQQFRKFCYHETPGPREALGRLQELCHQWLMPELHTKEQILELLVLEQFLSIL
                     PEELKIWVQQHGPKSGEEAVTLLEDLEKEFDDPGQQVPDNLQGPSVSWKDLTYLKTSQ
                     DSTSIQVRPLKTQLKSWNPCLSSKSDAKNNESTAKEDISEEKAPELSWDPSCRGVSEH
                     KSNLEWQQRSSPVHRGSFSQVIFTHKSLAKRDHLDESQRCLIISTNSVTCQKVSTDDR
                     PYRCDVCGHSFKQHFSLTQHQRIHTGEKPYKCNQCGKAFSLRSYLIIHQKIHSGEKAY
                     ECNECGKAFNQSSALTRHRKIHTGEKACKCNECGKAFSQSSYLIIHQRIHTGEKPYGC
                     SECGKTFSQSSKLIRHQRIHTGERPYECNECGKAFKQSSELITHQRIHSGEKPYECNE
                     CGKAFSLNSNLIRHQRIHSGEEPYQCNDCGKTFKRSSALVQHQRIHSGDEAYICNECG
                     KAFRHRSVLMRHQRVHTIK"
     exon            690..831
                     /gene="Zfp397"
                     /gene_synonym="2810411K16Rik; 6720480F11Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            832..5487
                     /gene="Zfp397"
                     /gene_synonym="2810411K16Rik; 6720480F11Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggcctttgt ggctaatgtc cgctactcgg gctgctcctc cgctgtagct ggggctccgt
       61 ccggcgggga gccctgcggc agatcccgaa gtcgccgctg tcagctggag agccccgtgg
      121 agccccctcg ggcacgcgcc tacgctgtgc tttaacccgg aagctaaaaa tagggaaaga
      181 agaggttaca cctgggcccc gagaggctct ggaaactcct ccccaagcac aaaacccaac
      241 tgtactaagc tttttgtgag ctatttcagc ccagaatggc tgtggaatcc agagcaattt
      301 caactttaaa acctcaggac catcaagaag aattaatact agtgaaaata gaagatagta
      361 gcttttcttg gagtcagaaa tgtaaacaga atgggagtgc ccaatcttgc caagaattat
      421 ttcgccagca attcaggaag ttttgctatc atgaaacacc tgggccccga gaggctctgg
      481 ggcgactcca ggaactttgc catcagtggc taatgccaga gttgcacaca aaggagcaga
      541 tcctagaact gttagtgctg gagcagttcc tgagcatcct acctgaagag ctgaagatat
      601 gggttcaaca acatggtcca aaaagtggtg aggaagctgt gactctactg gaggatttgg
      661 agaaagagtt tgatgatccg gggcagcagg tcccagataa tctacaagga ccgtcagtgt
      721 catggaaaga tttgacatat ctcaaaacat cccaagattc aaccagcatc caagtccggc
      781 ctttgaagac acagctgaaa tcctggaatc cttgcctttc ctctaaaagt gatgctaaga
      841 ataatgaatc aacagcaaaa gaggacattt cagaagaaaa agcaccagaa ctctcttggg
      901 atccttcatg tagaggtgtc agtgagcaca aaagcaattt agaatggcag caaagaagtt
      961 cccctgtcca caggggcagt tttagtcaag tgatcttcac acacaaatcc ttagcaaaga
     1021 gagaccatct tgatgaatct caaagatgct tgattataag tacaaactct gtaacatgtc
     1081 agaaagtctc tacagatgac agaccttaca gatgtgatgt atgtgggcat agctttaaac
     1141 aacatttctc tctaacacaa catcagagaa tacatactgg agaaaagccc tataaatgta
     1201 atcagtgtgg gaaggccttt agtttgaggt catatcttat tattcatcag aaaatccata
     1261 gtggtgaaaa agcatatgaa tgcaatgaat gtggaaaggc cttcaatcag agctcagctc
     1321 tcactagaca tcggaaaatt catacaggtg agaaagcttg taaatgtaat gagtgtggaa
     1381 aagcattcag tcaaagttct tacttaatta tacatcaaag aattcacact ggtgagaaac
     1441 cctatgggtg tagtgaatgt gggaaaacct ttagccagag ctcaaagctt attagacatc
     1501 agcgaattca tacaggagag agaccatatg aatgtaatga gtgtggaaaa gctttcaagc
     1561 agagctcaga gctgattacc catcagagga tacacagtgg agagaaacct tatgaatgta
     1621 atgagtgtgg aaaagccttc agtctgaatt caaacctcat aagacatcaa agaatccaca
     1681 gtggagagga gccttatcag tgtaatgact gtggcaaaac cttcaaaagg agctcagccc
     1741 ttgttcagca ccagagaatc cactctgggg atgaagcgta tatatgtaat gaatgtggga
     1801 aggcttttag gcacaggtca gtgttaatgc gccatcagag agtccacact attaagtaac
     1861 ttaatacaat gattcataaa tacatccata tatttttatc tttatcagtc aaaaggttga
     1921 ctttggagca agattccgag gcaatttttt tttttaaaaa aagtagtctt tagtcaatct
     1981 aacttgcttt gtgcggcact tccccaatgt taatgaaatt ttctttgaaa cttcctgtga
     2041 cttaaccaga aagaaatata agaccattac tttgagcttt gctcttaaca ttaggaatac
     2101 tcaggaaaaa aagaagtaat gcaatattgc gaccttatta tctatgagaa tgtcatgtga
     2161 aaaggcttca ttctgtcact acatctgact gtcaatgtac caggtttgtg agacagtatg
     2221 gttggcgtta agagactgct taaggaactc aaaaactttt actcaacagt caatagacaa
     2281 tgagaaaaca ttttcattga tgatttgttg atctaaagac aagcccagag gcaggcagat
     2341 ttctgagttc gaggccagcc tggtctacaa agtgagttcc aggacagcca gggctataca
     2401 gagaaaccct gtctcaaaaa acaaacaaag ataaaaaaga aatgaaatga acttgaaaag
     2461 taaaagatac aagttaattt ataaagtgaa gagtcccatc tgtccccact gccatgctgg
     2521 gaactaattt agggcttcac atgctagcaa gtagttagtc ctatgttact atatttttta
     2581 atactcgttt tgtgtcagga actctgaata taatggagtg ggggagaatg atttctatag
     2641 tctaatagct attaccagtc aggtaatgac aatgtagtca gtctattacg acttttaaag
     2701 attgctgctt aagcattttt cctatttcct tgaccaagaa cttggataaa ggaaattgaa
     2761 atgatatgaa gattgagggg ttaaccagga aagaaagcca ggtaacagga aaggaagaga
     2821 tctttctgtt taatggaagg aacaaaacat ggaacattgc ctactgagtt cagaattggc
     2881 atcacatctc tgagaagtat gactgcagat gagcctatga agattaaaaa cctaaagtcc
     2941 ttagtcacag caccatgaag agctttgtct tggttagtgt ggcctaatgg aaaaggagaa
     3001 taagtagttt cctggcccaa cctgagacaa catttaaatt tctacagaga gagtggtagg
     3061 agtggaatat ataaaagaat agcccagata gagactcttt gagttcttta gaatattgga
     3121 gttgatgtat tagaagattc tacggcaact gtatctaaag ctgcttctcc accatttctc
     3181 catcttagca tgactgcctg agctcgggta ttcaaaaatt gtcagtttct gagtccttgg
     3241 ctttttctcc agatacctca cacatgtctt ctgttagcga tatttagcag taccttgaaa
     3301 aaaatgtaag gaccatgcta gaaaacggac aacaaaagta ataattactg ctagtcagga
     3361 cttttcctct tctgaagaat ccatcagaag agtactgtaa ggctagtgta cagtgcaagg
     3421 cgaaagttga tcaactcaag cctcctcatc cctgtgctct ggacggtgag acaaggttga
     3481 agcattcctg gccaattgaa gctacataat aggacctagg accccatctc aaaatattgg
     3541 ggataaaaag ctgtttggaa gaataacata ccaaactcaa atctatgtat aaacagaaaa
     3601 ataattttta tgaggatacg aaagtaatac tgtcttggac atttataggt gagtatgtac
     3661 taaccaataa aaataatgag ccaaatgcct aacgtagatg ttaagtagga atgtttacaa
     3721 cagggaaaga actctggagt tcttacatag atcagaagga aatgtaaaag gtgtttgcca
     3781 agggctttgt gtatatgtta gtcattagta caaatcatat tttgtacata ggaaatggag
     3841 acttatagct acaaagtcag aatttgaaat cagaacccta ttcagggagc acaatgaatc
     3901 tttttcatta aatgttaatc cccgggtgag gctggtaggg aacagaagcc caagagagag
     3961 ttgtaaaaat aagtacttgc tttctgtaac atccctgtct caagtctaac aaacttaact
     4021 ctgatctttc actgttgatc aattcaatgc agacttacct gcctcataat attagaagaa
     4081 tccccttcag atctcctatg caagtaactt acatgtttaa agatttatgg ctgagaaaag
     4141 tgtgtcttgt aaatgattaa tagctgtggt cattagtgct tttccatgaa ttcaacaggc
     4201 atatacaagt tatcttgact atattctcat gttaaagagc tgaagatctt aagtttcaat
     4261 ctttatgaaa tggagcagac accaacatca gctgaaagaa agggttgttt tgtctctcaa
     4321 cagccttttc tgaaagaaaa taactaatgc ctttctctct gctccatgct ttttttcctc
     4381 ttgctctcgt ggctgtctaa aatgtctata aagcagcact tgccttacat ggatcttaaa
     4441 ccaaattaaa gtcaaggaag aattttatag aatctgaagg attgactctg tatttccctt
     4501 aagtggctta tcatctgcag acctaatgct gagggactct ccaggctcca gcgtccgtca
     4561 gcttccaatg catgctgttt ccttggtata catgcatgac ttcagaaaca ccagttttta
     4621 tttttttatc atgctaattc tgaatacttc ttgatcatgt aggtcattta cgatgtgaaa
     4681 catttcacgt tatacaactc aggctattac aaacaggaaa agaaagcaac ctgatttctg
     4741 aactagggtc acaaacagct ccagcaggaa ctagagtgaa ggcatgaagc aggagtgtcc
     4801 attccttatc atgccatgta ttgctatgac ctctgcatct gttctgccat tagccaagct
     4861 gctgattcta cattttaggt cttaatatca catccaagaa atttctagtt aactcataga
     4921 tcagataaaa tctctgatat ttcttccaac agactcctga atttaactgg catagttatt
     4981 gccacagact taaccataat aattaaatat gtatattcta ttagccctta gtttggagaa
     5041 gacaatgacc aagcctattc acccagtggc taagcccagc agattctaaa taaggaagta
     5101 cactgtaaca ggaatctcag ggttaaaggc actagcaaga tattaatact cctcagatat
     5161 taattaaact gatccaggac atgacatttc atagcctcaa ttcaacattt cagggttcag
     5221 taactcttaa aacatgccta ctcctgtcag gcataaacac ttttatagac agaccttata
     5281 aagagatctt acggatctgt gccccaatca tggacttaca tgaaggtgct caatggcagt
     5341 tctatctgaa gtggagagtg ggatgaagag cggattggtg agagtcctca tccagaaatg
     5401 ggtcagttcc cccccccccc aaccccctta gaaaatacca ttctttgtag acaagttttg
     5461 gataaaattc ttctttcaat atgcaaa
//
