LOCUS       NM_011758               3890 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus zinc finger protein 39 (Zfp39), mRNA.
ACCESSION   NM_011758 XM_126379
VERSION     NM_011758.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3890)
  AUTHORS   Wiese,C.B., Ireland,S., Fleming,N.L., Yu,J., Valerius,M.T.,
            Georgas,K., Chiu,H.S., Brennan,J., Armstrong,J., Little,M.H.,
            McMahon,A.P. and Southard-Smith,E.M.
  TITLE     A genome-wide screen to identify transcription factors expressed in
            pelvic Ganglia of the lower urinary tract
  JOURNAL   Front Neurosci 6, 130 (2012)
   PUBMED   22988430
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3890)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   3  (bases 1 to 3890)
  AUTHORS   Noce,T., Fujiwara,Y., Sezaki,M., Fujimoto,H. and Higashinakagawa,T.
  TITLE     Expression of a mouse zinc finger protein gene in both
            spermatocytes and oocytes during meiosis
  JOURNAL   Dev Biol 153 (2), 356-367 (1992)
   PUBMED   1397691
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK045944.1 and AK141135.1.
            
            On Dec 22, 2005 this sequence version replaced NM_011758.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK045944.1, AK141135.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164143
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-657               AK045944.1         2-658
            658-1753            AK141135.1         647-1742
            1754-2380           AK045944.1         1755-2381
            2381-3890           AK045944.1         2383-3892
FEATURES             Location/Qualifiers
     source          1..3890
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 36.35 cM"
     gene            1..3890
                     /gene="Zfp39"
                     /gene_synonym="CTfin33; Zfp-39"
                     /note="zinc finger protein 39"
                     /db_xref="GeneID:22698"
                     /db_xref="MGI:MGI:99183"
     exon            1..111
                     /gene="Zfp39"
                     /gene_synonym="CTfin33; Zfp-39"
                     /inference="alignment:Splign:2.1.0"
     exon            112..276
                     /gene="Zfp39"
                     /gene_synonym="CTfin33; Zfp-39"
                     /inference="alignment:Splign:2.1.0"
     exon            277..403
                     /gene="Zfp39"
                     /gene_synonym="CTfin33; Zfp-39"
                     /inference="alignment:Splign:2.1.0"
     exon            404..496
                     /gene="Zfp39"
                     /gene_synonym="CTfin33; Zfp-39"
                     /inference="alignment:Splign:2.1.0"
     exon            497..3890
                     /gene="Zfp39"
                     /gene_synonym="CTfin33; Zfp-39"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3030..3035
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp39"
                     /gene_synonym="CTfin33; Zfp-39"
                     /note="hexamer: AATAAA"
     polyA_site      3048
                     /gene="Zfp39"
                     /gene_synonym="CTfin33; Zfp-39"
                     /note="major polyA site"
     regulatory      3867..3872
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp39"
                     /gene_synonym="CTfin33; Zfp-39"
                     /note="hexamer: AATAAA"
     polyA_site      3887
                     /gene="Zfp39"
                     /gene_synonym="CTfin33; Zfp-39"
ORIGIN      
        1 agttcgcggg ggctttgtct cgcgccatct ttacatttga tcggtcagtt gagctggggt
       61 gtccgggtgc ctcaggccag tcagctgccg gaggcggacg ggggcgccat gaggaacttg
      121 cagcctgaca gtgtggagaa ctccttgagt caactcccca gtcgatgtct tgaaactaga
      181 aagcgtaaga gaagctacaa gaagaggcca gtcacctaca gttactggag acggacccag
      241 cggaatagag caagaaaaca caaggcacca gtaaaggggt tggtgtcatt tgaggatgtg
      301 tctgtggact tcacctggga tgagtggcag gacctggatg acagtcagag gaagctctac
      361 agggacgtga tgctggagac ctacagcagc ctggagtcct tgggccactg cattaccaaa
      421 cctgaggtga tctttaagct ggagcaagga gctgagccat ggagagcaga agacgtccca
      481 aagcagagcc gagcagatgt acagaagata acggaactga acgaaaccag ccaggacaat
      541 gaagagagac atctgtggca ccatgcaatt acctacagca acaagtcaac cgaggagaaa
      601 gttaaattag gaaacatagt taatgtgagc tcaaactgtg tttcaaatct gactgtaaag
      661 aatggaaact cctcaggaat gaggcctgtg gcacttactg tgtggcagag tgtccttccc
      721 cctaacaagc ccgatgacac gaggattgga gaggaacttg atgcctctct aactagtgag
      781 ccccccatac acgcagagca tcctgggttg tatagcagag ctccaggcac tggacagcag
      841 tttcagtgtt gtatgcaaga agtgacctgc aacacaaagg cattatggac taagaggttt
      901 cacattgcac atgggtccag taagtttggc gagtccgaga aagtgcctga tgaggtagct
      961 cttcatgccc aagacgtgag ctgggtacgg gcagaaactt ttgaatgtag tatttgtaag
     1021 aaaacattct gtacaaaatg tgagctcatg aaacacaaga aaatacacaa aggacagcaa
     1081 tattacacgt gtagggattg tgagaaaacc ttcattaagg aatcatacca cacagaccag
     1141 agggtacatg caggagtcgg gtcccataga tgtaaacaat gtgagaaatg ttttcaccag
     1201 aagaaccagc aaaatgtgca cgaaagagtc cccagagaag cccgactctg ggaagtttat
     1261 cagtctgaaa acagctttgg cgagaagcca aatctcaggc gctatcagag gacccgtgcc
     1321 ggttataagc cctatggatg taacctgtgt gggaaggcat tttaccgcaa gtcacacctt
     1381 ggcaggcacc agaaaattca cacgggtgag aaaccctatg gttgtgaaga gtgtaagaaa
     1441 actttctacc ataagtcctc cctcaccata catcagagga ctcacacagg tgagaagccc
     1501 tacgagtgta aaaaatgcag gaaaactttc tactgtaagt cggacctgaa tgtccaccat
     1561 agaactcaca ctggcgagaa gccgtacgag tgtgacgaat gtaggaaaac gttctactct
     1621 aagtcacacc ttgtgataca tcagaaagtt cacacaggcg acaagccata cgaatgtgaa
     1681 gagtgtcaga aagccttcag ccgtaagtca aaccttaccg tacatcagaa aacacataca
     1741 ggggagaaac cttacgagtg caatgtatgt gggaaaactt ttcaccggca gtcacacctc
     1801 aacatgcacc aggggactca cactggccag aaaccctacc aatgcgaaga gtgtgggaaa
     1861 gcgttctacc agaagtcaag cctcagaaga catcagagaa accacacggg gagcagacca
     1921 tatgcatgtg aagaatgtag gaaaaccttc ctccataagt cctccctcac tgtccatcag
     1981 agaagccaca caggctacaa gccatactcg tgtgaggagt gcaggaaaac gttttacagt
     2041 aagtcacatc tcaccgtcca tcagagaacc cacacaggcg agaagcccta tgagtgtaag
     2101 ctatgcaaga aggcttttca ccagaagtca taccttaacc ggcatcaggt aactcacgga
     2161 agtgagaaac gatttgaatg tcaagaatgt aggaaaacgt tttatcacaa gtcttccctc
     2221 actgtacatc agagaatcca cctgagggag ctcctgtgcg tctgatgtgg gaagctctgt
     2281 cagcaggaac catcagctgg caccagacaa ggcatgtgga gggcgtctcc tataaatgtg
     2341 acagtgtgga caatgttttt gcaagaaagg acacctttgc aagtgctaac tttacacagg
     2401 aaattctgtg tggcacaagt tggctgtctt ctctggaaca tagtccccat tactgagggt
     2461 ctgtgtgatc atgtaacaca cacacacaca cacacacaca cacacacaca cacacacaca
     2521 cacacacaca cacactgctt tcatttcact gctttcagcc aggcccacag aaatactttt
     2581 ttcttcctcc ctaagttctc atgagctctg ggtctgagat aaatgtcacc cgtaagatag
     2641 ccttgacatc cattgtcaga aagtccccca tttaagagaa aaagaactga ctggaaatca
     2701 ttcatttttg tccccaacta ctcttttttt tttttttttt tcagtttcaa gctgttgtgc
     2761 atggtgtttt tgtaagaatg cactaactca atacaactgg gagaacctac atgctcttta
     2821 atatttcaga gtttgtacac aagggaaact tttacaaatt gagaaagttt atcaaagacg
     2881 tttcattgaa caatttgaat aaatcaaatg tgaataagtt aacaggtgaa actttgaaca
     2941 aaacttccat gtcagaagtt tgtagtgaag aaaaaccatc agtctttgta attttaatat
     3001 taactttcaa atggagccac acatgtgcca ataaatatgt gagtgatatt attgtctgtc
     3061 agagcacatt gtatctggga acatttgcgg ttattgtaac tggaggctgg agttgctact
     3121 ggcatgcagt aataggggcc agccatattt tttaaacaac ttgtactgca ccaaatattc
     3181 cctcattcac ctatatattt tggtatttta atgaaaaatt ccttggtggg acctagatta
     3241 attacaggaa atgtgtttgc tgtgtatatg tcttgctttg ttaaacaggg actgaggtac
     3301 gcatgtagcc cagtggtaag atatatgtgt aacattcatg agaccctggt ttcagcctca
     3361 ccacatacat gcataaactc aaacctacaa atctccacat caaataccac tctagcatgt
     3421 gttcatattt tctcaaatat tgtcctatgc accttcccca ctttgtgcca gtgcaaataa
     3481 gtatgagtgg gaattgctat tttaccaccc ctctagtgta tgatgctaat ataaagcctg
     3541 ccaattgatc taatggaaat agtattcata tagaaacgaa caaatgaagt ccctgaattg
     3601 ttcacagctg acacttaaag agccacaagc aacagttctt atgtcggctt cagtgctctt
     3661 ggtgagcaac aatttgttgt ccacttattt gtgctcccct ggtcctacac tccatcctcc
     3721 atatgaaagc gttgaacaga agtggtctgt tttaacttac ctagtttgca ctgaacattg
     3781 ctgtgtcacc gacagcctaa gtcttttgtc actacacatt ttgctctagc tctaaagatg
     3841 tttttaccct atacataact gccttgaata aaagactttg tgtctaatgt
//
