LOCUS       NM_019565               4575 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus zinc finger protein 386 (Kruppel-like) (Zfp386),
            transcript variant 2, mRNA.
ACCESSION   NM_019565
VERSION     NM_019565.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4575)
  AUTHORS   Guo G, Huss M, Tong GQ, Wang C, Li Sun L, Clarke ND and Robson P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
REFERENCE   2  (bases 1 to 4575)
  AUTHORS   Yokoyama S, Ito Y, Ueno-Kudoh H, Shimizu H, Uchibe K, Albini S,
            Mitsuoka K, Miyaki S, Kiso M, Nagai A, Hikata T, Osada T, Fukuda N,
            Yamashita S, Harada D, Mezzano V, Kasai M, Puri PL, Hayashizaki Y,
            Okado H, Hashimoto M and Asahara H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   3  (bases 1 to 4575)
  AUTHORS   Tamplin OJ, Kinzel D, Cox BJ, Bell CE, Rossant J and Lickert H.
  TITLE     Microarray analysis of Foxa2 mutant mouse embryos reveals novel
            gene expression and inductive roles for the gastrula organizer and
            its derivatives
  JOURNAL   BMC Genomics 9, 511 (2008)
   PUBMED   18973680
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 4575)
  AUTHORS   Wang L, Zheng A, Yi L, Xu C, Ding M and Deng H.
  TITLE     Identification of potential nuclear reprogramming and
            differentiation factors by a novel selection method for cloning
            chromatin-binding proteins
  JOURNAL   Biochem Biophys Res Commun 325 (1), 302-307 (2004)
   PUBMED   15522233
REFERENCE   5  (bases 1 to 4575)
  AUTHORS   Blackshaw S, Harpavat S, Trimarchi J, Cai L, Huang H, Kuo WP, Weber
            G, Lee K, Fraioli RE, Cho SH, Yung R, Asch E, Ohno-Machado L, Wong
            WH and Cepko CL.
  TITLE     Genomic analysis of mouse retinal development
  JOURNAL   PLoS Biol 2 (9), E247 (2004)
   PUBMED   15226823
REFERENCE   6  (bases 1 to 4575)
  AUTHORS   Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng
            EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC,
            Babbitt PC and Ferrin TE.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   7  (bases 1 to 4575)
  AUTHORS   Piao Y, Ko NT, Lim MK and Ko MS.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ140586.1, AK165544.1 and AC243430.3.
            
            On Nov 1, 2013 this sequence version replaced NM_019565.3.
            
            Transcript Variant: This variant (2) has an alternate splice site
            in the coding region but maintains the reading frame, compared to
            variant 1. The resulting isoform (b) lacks an internal segment,
            compared to isoform a.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK165544.1, SRR9219383.132991.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-89                CJ140586.1         2-90
            90-940              AK165544.1         72-922
            941-4575            AC243430.3         11545-15179
FEATURES             Location/Qualifiers
     source          1..4575
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 62.59 cM"
     gene            1..4575
                     /gene="Zfp386"
                     /gene_synonym="Kzf1; mKIAA4205"
                     /note="zinc finger protein 386 (Kruppel-like)"
                     /db_xref="GeneID:56220"
                     /db_xref="MGI:MGI:1930708"
     exon            1..143
                     /gene="Zfp386"
                     /gene_synonym="Kzf1; mKIAA4205"
                     /inference="alignment:Splign:2.1.0"
     exon            144..270
                     /gene="Zfp386"
                     /gene_synonym="Kzf1; mKIAA4205"
                     /inference="alignment:Splign:2.1.0"
     exon            271..4575
                     /gene="Zfp386"
                     /gene_synonym="Kzf1; mKIAA4205"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acagagcctt gacaatatcg cgagtccaca tcccgtacgc gacctttgtg ttggaaaatg
       61 tgagcgtgtt ttccagcttt tggaagcccc ggtggccctt acgaaatcac gggtgctgga
      121 gatgcaggag agccatggag atggagcagt tgaccttccg cgacgtggcc gttgacttct
      181 ctccggatga gtgggaatgc ctggaccctc ctcagcagag gctgtatagg gatgtgatgg
      241 tagagaacta cagaaacctg gtctctgtgg ctctttctca tcattgtacc cagaactttt
      301 caccagagca gatcctgaaa tattccttca cagaagtgac taatggaagt tatagccttc
      361 agcatttata cttaagggaa gattgtgcaa atgtaggtgg gaataaagca gcagcctgcc
      421 atggtagaca taagcaatgt ctgatcacaa gcaataccaa agacaacaga aatcaagaac
      481 agaaaacagc tctgaaaaaa cctcatgcaa ggacagatac ttttgatgag ccatgtgtct
      541 ataactgtaa atatccacag gaaatttttc aacatgactt aactttgaaa gaaagttggg
      601 aagatctgat agatagatta atttttcact caagcaattt catagacaaa gaattaagaa
      661 acagaggacc gatctctaaa agtgatcaag tcgagtcttc ctatcctgga agagccatac
      721 tcttcagtca gcaaatacca gtctcctgtg gccaaaagca caatactaat gattgtggat
      781 tgcctgctac tgatccatta ttgcatagcc aaaatctaga tacagatatt tgggaaaccc
      841 cttacatgta taaggaaatt agcaaaggtt ttagtagtgg atctttacta aatagttgca
      901 atgatgtggt tatcttagag aaatctggtc agcgtgacaa agtacagaat gactttgacc
      961 attgcttgag tcccaacaac catcaatgta atcttccaaa gaagcttttc aattgtgata
     1021 atttctttac tcaatgttca aagcttacta tccagcagtg taactatatt caagataatc
     1081 attacaagag tatagattgt gacacaatgt ttaataaaac tttaaacgtt actaggcgta
     1141 aaattcagca ttccaagaaa tcctacaaat gtaatgaatg tggcaaagcc tttaaatatt
     1201 gctcaagtta cagaaaacac agcataattc acacaggaga gaaaccctac aaatgtaaat
     1261 tatgtggaaa atcctttacc cagtgtgcaa gccttaaaaa acatcagaga atccacactg
     1321 gagagaaacc ctacaggtgt gaagaatgtg gcagaagctt taaccactac tcaattcttg
     1381 gtcagcacca gaggattcac acaggagaga aaccctacaa gtgtaaacag tgtggcaagt
     1441 cctttactca gtgttcaagc cttcagaaac accaagtaat ccacactgga gagaagccct
     1501 acagatgtgc agaatgtggc aaatctttta cccaaaactc aacacttagt caacaccaga
     1561 gaattcatac tggagagaaa ccttacaaat gtgaagagtg tggaaaggcc tttacccaat
     1621 gttcaagcct tagaaaacat cagagaattc acactggaga gaaaccctac aaatgtgaag
     1681 tatgtggcag agcctttaac tgccgctcat cttttactaa acacaagaga attcacacag
     1741 gagagaaacc ttacaaatgt aaagactgtg acaaagcttt tatccactgc acaaatctta
     1801 ttcaacacca gagaatccat acaggagaga aaccatacaa atgtaatgaa tgtgggaaat
     1861 cctttagtca atgttcaaac cttagaaagc atgagagaat tcatacatga aaaaaactag
     1921 caaatgtcaa gaatctagta aatctttgat ccatagtcaa aaacttgtgt aatgtcctct
     1981 aattcaaact ggggggagtc ctacagaggt agtgaatgta acaaagtctg acttatttac
     2041 aggtcactat cagagaacta attgttcctt gggagaaacc ctacaaatct gaaaaatgcc
     2101 aaattctgaa ggtttaaaat cctttaccag acaccacaga attcacttta gaaacacaaa
     2161 tgattttttt aatgtggaaa aaaattaatt gttggccatc tcttactaaa ctttgaattc
     2221 acgcatgaga caaaaactgg caaatgtgca caactggaca gttatttata gctcttcagc
     2281 tttcactaaa tacagaaaat cacacacgag acaaacccta caagtgtaga aaaagtgaaa
     2341 cttttaccat tttgcatacc ttaacccctg agtttatact agaatgaaac actgcaaaca
     2401 taactgtttc aaagccttta catcaaggca caaagctatt taacatcaga gaacacagta
     2461 aaaatttcaa ttttgtccca agtgcacaac tcaaagaaca gtataatatt tgttctgtgc
     2521 aagcataagt gtaatagaag accttgatta acatacaggc tcttaatata attgatatat
     2581 agaagtcttc aagtataaat gttctaaaac ctttatcttt ggcttaaagt ttacactatt
     2641 aattctggta gaaattggtt ctcaaagctc tcctggaata ccatcaataa ctcattctca
     2701 aaacctatga ttgtatcaca tattaaaagt ttctaaatgt gctcacccag ggaaatgaga
     2761 aagcaccaaa aagcatcaga agaacaagac tcataataag tgcttgtgaa gagtgttttt
     2821 ctgaagactg gacagtgtat ttttcttatc caagagagag tgctagatga caaatattac
     2881 taatgaattc gtgggcaatg aagggattct attaatcatt cactcctagg atctttaagt
     2941 gatctttcct aaattggcat gatgtggcag gctgagaggt ttcagaatat ttgtgaactg
     3001 agactgccac ctgcccagaa taggagggag gaaaaatacc cttgaggttc tcttacagtg
     3061 ccagcctcta attgtgacaa gcttccaata cagccaccac ttgctgaaca cccagtccct
     3121 gttagacaaa gtaaacacca catgccaaga atgagcaatc cagaggtctt ggtgtttctt
     3181 gaacagactg aagggtggta ccaaggcagc agcacaatat aaaagtttct gttggtatca
     3241 tctgaagtca gcctggtgga acacaggctc agtccactgc cagataggca tatgaccgtt
     3301 ctgtgttggt cccacgtgca agattaccga accaggaggg cacatgtgct ccacagggtt
     3361 cacacgggaa ggatcccagg gctgcataag cacctgtgat ttgaccacat tagcccaggt
     3421 agttttgcat aggtgaaagg gagagcttgt ttgaagtgta aaaggccacc tgcttgaagc
     3481 ttcaactgac ctttttgcac agcaatgcag cgggcatcag agttgttagt ttttccatct
     3541 agggagggga ggatcagtca tctaaaccct aatgagtggt gtgcagaatc gggctaggtt
     3601 aagtggttgg atgtggaagt taatgtgttt atttgttaag accaaaagga tcttgacctg
     3661 aacctcaaga tttgtggtgt cccaagtggt gcttagtcta tgttgggaca ctggatatga
     3721 gacctagcct gaatagacag aagttggggt gtatggaggg gaatttaaac agagtgagcc
     3781 aggcttaccc tgggtgaaga gtttgtagga tatggttggc caaagaggtt ggatgtaaca
     3841 tgagaaggga ctctagtttg gaaataagta gcaggagttg tccaggtttt gaagttttct
     3901 ggcttagagc tcttctggcc tgccccgccc cctgcttcct gagtgttgag ccagcttctt
     3961 gttcctgttg ttgtgccttt cctgacaaag cagaccacgc ctgaaattat aagccaaaag
     4021 aaattatttc tcccataaat tgcttttatc tggaaactgc atcacagcaa cacaaactaa
     4081 tggggccctc aggttaagca tccagagcaa acagttcaaa gacatttgcc cttttaacaa
     4141 aaaaaaaaaa gttttcatta ttcataaata ggaatagcat ccatgataaa tgaagtgcag
     4201 gtggactcga ccctttaaag ttgcaaaggt tgagaaattt acttgcgtgg gttcacaggg
     4261 tgggtagagt cctctgcctg tgattcctgc taattagaat ttagctgaaa tgtaagtgaa
     4321 tctgtcagcc tcagttctaa tggggatggg catatgtgtc ctcagtgggt attttccatt
     4381 gctttctctg gcatcagaaa caatgaaagc gatgtacaaa atcattggaa gggctagagt
     4441 agtggtgtga aaattgtgaa gtctcgttta gctgtagagg ttggctttgt ggttttttgt
     4501 ttttgttttt tgtagtgtat gagtgtggcg tgcatgtatg tgtatgcatt gcgcatgtgt
     4561 gtggcaccca caaaa
//
