LOCUS       NM_178411               5033 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus zinc finger protein 334 (Zfp334), mRNA.
ACCESSION   NM_178411
VERSION     NM_178411.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5033)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 5033)
  AUTHORS   Koscielny,G., Yaikhom,G., Iyer,V., Meehan,T.F., Morgan,H.,
            Atienza-Herrero,J., Blake,A., Chen,C.K., Easty,R., Di Fenza,A.,
            Fiegel,T., Grifiths,M., Horne,A., Karp,N.A., Kurbatova,N.,
            Mason,J.C., Matthews,P., Oakley,D.J., Qazi,A., Regnart,J.,
            Retha,A., Santos,L.A., Sneddon,D.J., Warren,J., Westerberg,H.,
            Wilson,R.J., Melvin,D.G., Smedley,D., Brown,S.D., Flicek,P.,
            Skarnes,W.C., Mallon,A.M. and Parkinson,H.
  TITLE     The International Mouse Phenotyping Consortium Web Portal, a
            unified point of access for knockout mice and related phenotyping
            data
  JOURNAL   Nucleic Acids Res 42 (Database issue), D802-D809 (2014)
   PUBMED   24194600
REFERENCE   3  (bases 1 to 5033)
  AUTHORS   Guo,G., Huss,M., Tong,G.Q., Wang,C., Li Sun,L., Clarke,N.D. and
            Robson,P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
REFERENCE   4  (bases 1 to 5033)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL591064.11.
            
            On Dec 11, 2007 this sequence version replaced NM_178411.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC040388.1, SRR7652917.932357.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-299               AL591064.11        36690-36988         c
            300-362             AL591064.11        35655-35717         c
            363-489             AL591064.11        31968-32094         c
            490-582             AL591064.11        31420-31512         c
            583-5033            AL591064.11        26165-30615         c
FEATURES             Location/Qualifiers
     source          1..5033
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 85.53 cM"
     gene            1..5033
                     /gene="Zfp334"
                     /gene_synonym="D2Ertd535e"
                     /note="zinc finger protein 334"
                     /db_xref="GeneID:228876"
                     /db_xref="MGI:MGI:2388656"
     exon            1..299
                     /gene="Zfp334"
                     /gene_synonym="D2Ertd535e"
                     /inference="alignment:Splign:2.1.0"
     exon            300..362
                     /gene="Zfp334"
                     /gene_synonym="D2Ertd535e"
                     /inference="alignment:Splign:2.1.0"
     CDS             348..2387
                     /gene="Zfp334"
                     /gene_synonym="D2Ertd535e"
                     /codon_start=1
                     /product="zinc finger protein 334"
                     /protein_id="NP_848498.2"
                     /db_xref="CCDS:CCDS17079.1"
                     /db_xref="GeneID:228876"
                     /db_xref="MGI:MGI:2388656"
                     /translation="MDSTQRSISFKDLAVDFTREEWQRLGPAQRLLYRDVMLETYSNL
                     IAVGLHVSKPDVILKLEQGKEPWVVENLSRQNHAEDDEPLEKDKKTQDKHLKQFSVVN
                     SKPMLEKANLSEKTVPLNMNSVSSGKTLHKYDPGGNGLENNSEKTIAKPSKANGKVAA
                     DQDGRGKPALHTKADRSHSAAKRYRRNEVRDVKGQGEGLTQQQNTQSASQPSEHREGE
                     QESAGAARSEEQPERKRNECAECRKTFSKRSTLIVHLRIHTGERPYACNYCRKTFRIK
                     ASLTRHQRIHTGERPYKCKECGKAFIDKSALIVHQRIHGGEKSYECNECGKTFFRKSA
                     LAEHFRSHTGEKPYKCKECGNAFGKKSYLIVHQRTHRGEKPNECKECGKTFFCLSALT
                     AHQRIHTGEKPYECKECDKTFFCQSALNVHLRSHTGEKPYKCRLCGKYLCTKSALVAH
                     QVIHRGKKTFECPECGKLFYLKSTLTIHQRTHTGEKHGLLSKWSRASAAKPNCSEQKR
                     ADAKDNVHECHDHKRPAHKSSRRFAHKRTIWERPYECEECGRTYCRKSALRHHQKTHT
                     GERPYECKECGKTFCQKVSFTEHQRTHTGEKPHKCKECGKSFRHKSAFTVHKRIHTGE
                     KPYACNECGKSYRRLWTLTEHQKIHTGEKPYECNLCKKSFRHKSNFLLHQKTHKK"
     exon            363..489
                     /gene="Zfp334"
                     /gene_synonym="D2Ertd535e"
                     /inference="alignment:Splign:2.1.0"
     exon            490..582
                     /gene="Zfp334"
                     /gene_synonym="D2Ertd535e"
                     /inference="alignment:Splign:2.1.0"
     exon            583..5033
                     /gene="Zfp334"
                     /gene_synonym="D2Ertd535e"
                     /inference="alignment:Splign:2.1.0"
     regulatory      5015..5020
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp334"
                     /gene_synonym="D2Ertd535e"
                     /note="hexamer: ATTAAA"
     polyA_site      5033
                     /gene="Zfp334"
                     /gene_synonym="D2Ertd535e"
                     /note="major polyA site"
ORIGIN      
        1 gctcttccag gcgaggctcg aggggcctct gtgcgccaca attgcctggg gccttctggg
       61 agctacaaaa gaagcgaggt ttcccctgag ccagaggaat tccgggtggc gactccgggg
      121 caggatcaga agaaccagcg ccttcctggg gcccgcggag gcttgcgcgt gtccaggggc
      181 cgggcgaggc tagcgggcgc ccccggggct gcaggcctcc gggcgggcag cctgggaagg
      241 agagaggtgt gtgcgtgcaa aaagcggatc ccagcagtcc tgcggatgcc cttggcccgc
      301 ccttggatca ccggtggttc ctggcccttt cttgagaacg cctggaaatg gacagtaccc
      361 agagatcaat ctccttcaag gacttggctg tggacttcac ccgcgaggag tggcaacgtc
      421 tgggccctgc gcagcgtctc ctctacaggg atgtgatgct ggagacctac agtaacctca
      481 tcgcggtggg gcttcatgtg agcaaaccag atgtgatctt aaaactggag caaggaaaag
      541 agccctgggt agtggaaaac ttgtcacgac agaaccacgc agaagatgat gagcccttag
      601 agaaggacaa gaaaacacaa gacaaacatt tgaagcagtt ttcagtcgtc aatagcaaac
      661 caatgctgga aaaggccaat ctgtctgaga aaacagttcc tctcaacatg aatagtgttt
      721 cttcgggaaa aacactccat aaatatgacc ctggcggaaa tggcttagaa aataactcag
      781 aaaaaaccat tgcaaagcca agcaaagcca atgggaaagt agctgctgat caggatgggc
      841 gaggaaagcc agctctgcac accaaggctg acagaagtca ctctgcggca aaacggtaca
      901 gacgtaatga agttagggat gtcaagggtc aaggtgaggg tctcactcaa caacagaata
      961 cgcagtctgc aagtcagccc tccgagcatc gtgaaggtga acaggagtca gccggcgctg
     1021 cgaggtcgga ggagcagcct gagcggaagc ggaatgaatg cgccgagtgt aggaagacct
     1081 tttcaaagag gtccactctc attgtccacc tgagaatcca taccggagaa agaccctacg
     1141 cctgcaatta ctgtaggaaa actttccgta taaaggcaag cctcactcga caccagcgga
     1201 ttcacaccgg agagaggcct tacaagtgca aggagtgtgg caaagccttc atcgacaagt
     1261 ctgccctcat cgtgcatcag aggattcacg gaggggagaa gtcctacgag tgtaacgagt
     1321 gtggcaagac cttcttccgg aagtcagccc tggctgagca cttccggtcc cacaccgggg
     1381 agaagcctta caaatgcaag gagtgtggca acgcctttgg caagaagtcg tacctcatcg
     1441 tgcaccaaag aactcaccgg ggcgagaagc ccaacgagtg taaggagtgt gggaagacct
     1501 tcttctgtct gtccgccctg acagcacacc agaggatcca cacgggggag aagccctacg
     1561 agtgcaagga gtgtgataag accttcttct gtcagtcggc cctcaacgtg catctgagaa
     1621 gtcacaccgg cgagaagccc tacaagtgcc gcctgtgtgg gaagtatctg tgcaccaagt
     1681 ctgccctggt ggcgcatcag gtcattcaca gagggaagaa gaccttcgag tgtcccgagt
     1741 gtgggaagct tttctacctg aagtccacgc tcaccatcca tcagagaacc cacacaggag
     1801 agaagcatgg cttgcttagt aagtggagcc gagcatccgc tgcgaagccc aactgcagcg
     1861 agcagaagag ggcggacgcc aaggacaacg tgcacgagtg tcacgaccac aagcggccag
     1921 cccacaagag ctcccgccgc ttcgcgcaca agagaaccat atgggagagg ccttacgagt
     1981 gtgaggagtg tgggcggacc tactgcagga agtcagctct caggcaccac cagaagacgc
     2041 acacgggcga gcggccctac gagtgcaagg agtgtgggaa gaccttctgc caaaaggtct
     2101 ccttcacgga gcaccagcgg actcacaccg gcgagaagcc gcacaagtgc aaggagtgtg
     2161 ggaagtcctt ccgccacaag tcggccttca ccgtgcacaa gaggatccac accggggaga
     2221 aaccgtacgc ctgcaacgaa tgtggcaaga gctaccgccg cctctggacg ctgactgaac
     2281 accagaaaat acacacgggc gagaaaccct acgaatgtaa cctgtgtaag aagtcatttc
     2341 gccacaaatc aaacttcctc ttacatcaga aaactcacaa gaagtaaatt ccagcagggt
     2401 aacagataat ttacgaggtg cccaaatcct gaattacaca taaaggtgta aggccttgtc
     2461 agcacgggga ctactactga cgagtttctg ccggagtcag agggcttaca cggacgacgt
     2521 ccaactctca ttgttaactg tgaagacatt cggcatttca gacattacac caggtgtgcc
     2581 tgcctccctt tcaaaccacg gaacaaacac taagtcctac ctgctctccc tccagttaat
     2641 ttgcatagcg tatgatgtgg gcgtgaggcc agtgttgatt ccagatcatt accagttgtt
     2701 cctgggataa ctgggcagtg tctgtttatg agtttacagt attaacagct cagactacat
     2761 agcctgtttg tcccctgtcg ctgctgtcta gtgacaggcc ctaatccctt catctgcaaa
     2821 ggtgagtcag ccgagccacc cttcacttcc ctacctgtag cgactcccac acagcagtaa
     2881 gcatttgcta aagccgagtc attggttttc taataagagg cacaaggtgg cttgtaagtg
     2941 cctccttgag cttccatgta agccaagaaa acagtgaccg cagttaccat agcaaaacca
     3001 aaaatgaagt gagcagattt gaatagtgaa gaggatttgg ggagtgtttg agtcaaaaca
     3061 gtgtctgtgt tgtttgtgtt ttaaatacct ctgttgtatt agtggtttga ttatgtcagt
     3121 gttttcaaaa atatcttgat tttttttttt taatgaacat gtccataggg gtatgattta
     3181 gaatttacct gtcagcttct gagaaaacgt ctccatggtg ccaaatagaa tgacgtagtg
     3241 tggatatgtg catctagcca gaatgtctgc cattcgtggt gggttaatgt caggtcctgg
     3301 gagccagccc tgctctctga tgtgctgtgc ttttcctagg acaatgaagt gagaagggcc
     3361 actgggtatc ttgtcatggg ccttgcctgt ggttaagctg gcaaatcagc ccttggcatg
     3421 gctgccgtaa gttgtgttgt ccagcttagt tttgataatg agtgtcactc tgacctgtct
     3481 gctgcctccg cttgtggtgt tgggctctta ggtaagaaaa gatgcccctt gtttgagacc
     3541 catcagaaat cccagtatga acaagattat ctgtttattc agtttgtatt ttatatcctt
     3601 cagtaaggta aatacatatt tgtgaatgca catgtattcg atatatacta atatatgctg
     3661 aaacaggaat atatgtatat atcaatagta gtctttttct gaaaatttta ataattactt
     3721 aaaagatttg ggtttgctgt tgcaaataca attttatcat ctgcttttaa aattactgat
     3781 agaggcctga caaggattag caagcaaagg tgcttgctgg caagcctgac aacccgagtt
     3841 cagaccttcc gtctcacgta atagagagaa ctgattttct tacacgctac cctgatttcc
     3901 acaagtgtga tataacatgc acacacacaa caaatacata catgcatata tacatacaca
     3961 cataaataat aaataagatt taaagtgttt ttaaaactca ctgatcagat tctgaagcat
     4021 ttttaccaca cttgtcaaag tgcattccct atacttactt ttcttcgctt ggtcttagaa
     4081 aactcccagc tccttgtaga ggatgttggt gagctgtctt gtggaggtag tttttgctct
     4141 ttgaagatct gtacctagct gtctaattgt gccttctgct tgccacttat gagacaaatc
     4201 acaatcttgt gattatggaa ttgtttccca ttattggttt gaccaaggaa gagagttttt
     4261 tcaagtctgg tgagaaatat ttaagtccat aaatggaagg tcagagagcc ccaatcacag
     4321 aaagtcacaa gacacatcag agtgacactt gagggtccag tgagaggact ccgcttgttc
     4381 tgcaagccag caacccggga cacctataaa tgtggacagc gagacccggc tccgcaggac
     4441 tgtcctctga ctgtacgtgg gctgccgtcc caagcacaca gacaacagtg cagtttttaa
     4501 agttgtttta aaaagaaata acttgaagac acgtaaaaaa tctaaagcaa ctaaatggaa
     4561 gagaatcctt aaaagcagct gaagggaatg gcgacatgta ggtctgtgga cttcctacag
     4621 ctgccacaag aacccatcac actgatcaga agagtgtgac ggttctcagc tcacctgtca
     4681 ggcccagtgc tgcgagcctg ctcccttctg accgctggag gccggctggg cttctcccgt
     4741 gtggtcttcc tacagcttgt ggcaatgcaa cttcaggttt tgcttctgtc ctcactacgc
     4801 ctgttcctcc tcactgtgca tgtctgtcgt ctctgcggat gtctgtctat gtttccattt
     4861 tatcaggaca tgtctgatca aggtcccacc ttacttacac gtgacctcat gttgattggc
     4921 atctgtaaaa gccttattcc gtaaggtcac attgaaagta ttagaggctg gagggacatt
     4981 attggtaccc taagacgtac cccatgttta gcagattaaa atgacggtag ata
//
