LOCUS       NM_145600               1663 bp    mRNA    linear   ROD 08-JUN-2024
DEFINITION  Mus musculus zinc finger protein 330 (Zfp330), transcript variant
            1, mRNA.
ACCESSION   NM_145600
VERSION     NM_145600.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1663)
  AUTHORS   Bolivar,J., Diaz,I., Iglesias,C. and Valdivia,M.M.
  TITLE     Molecular cloning of a zinc finger autoantigen transiently
            associated with interphase nucleolus and mitotic centromeres and
            midbodies. Orthologous proteins with nine CXXC motifs highly
            conserved from nematodes to humans
  JOURNAL   J Biol Chem 274 (51), 36456-36464 (1999)
   PUBMED   10593942
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC124757.4.
            
            On Feb 7, 2019 this sequence version replaced NM_145600.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC008086.1, AK050534.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164141, SAMN01164143
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-89                AC124757.4         157427-157515
            90-221              AC124757.4         158561-158692
            222-241             AC124757.4         160214-160233
            242-312             AC124757.4         160701-160771
            313-392             AC124757.4         162173-162252
            393-519             AC124757.4         164233-164359
            520-624             AC124757.4         164799-164903
            625-671             AC124757.4         165514-165560
            672-789             AC124757.4         166600-166717
            790-1663            AC124757.4         167081-167954
FEATURES             Location/Qualifiers
     source          1..1663
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 39.58 cM"
     gene            1..1663
                     /gene="Zfp330"
                     /gene_synonym="Noa36; Znf330"
                     /note="zinc finger protein 330"
                     /db_xref="GeneID:30932"
                     /db_xref="MGI:MGI:1353574"
     exon            1..89
                     /gene="Zfp330"
                     /gene_synonym="Noa36; Znf330"
                     /inference="alignment:Splign:2.1.0"
     exon            90..221
                     /gene="Zfp330"
                     /gene_synonym="Noa36; Znf330"
                     /inference="alignment:Splign:2.1.0"
     CDS             102..1052
                     /gene="Zfp330"
                     /gene_synonym="Noa36; Znf330"
                     /note="isoform 1 is encoded by transcript variant 1;
                     nucleolar cysteine-rich protein; nucleolar autoantigen 36"
                     /codon_start=1
                     /product="zinc finger protein 330 isoform 1"
                     /protein_id="NP_663575.1"
                     /db_xref="CCDS:CCDS22447.1"
                     /db_xref="GeneID:30932"
                     /db_xref="MGI:MGI:1353574"
                     /translation="MPKKKTGARKKAENRREREKQLRASRSTVDLAKHPCNASMECDK
                     CQRRQKNRAFCYFCNSVQKLPICAQCGKTKCMMKSSDCVIKHAGVYSTGLAMVGAICD
                     FCEAWVCHGRKCLSTHACACPLTDAECVECERGVWDHGGRIFSCSFCHNFLCEDDQFE
                     HQASCQVLEAETFKCVSCNRLGQHSCLRCKACFCDEHTRSKVFKQEKGKQPPCPKCGH
                     ETQETKDLSMSTRSLKFGRQTGGEEDGASGYDAYWKNLSSDKYGDTGYHDDDEEEDEA
                     EDEEEEDGKDSDAESSDLFNNLNLGRTYASGYAHYEEQES"
     exon            222..241
                     /gene="Zfp330"
                     /gene_synonym="Noa36; Znf330"
                     /inference="alignment:Splign:2.1.0"
     exon            242..312
                     /gene="Zfp330"
                     /gene_synonym="Noa36; Znf330"
                     /inference="alignment:Splign:2.1.0"
     exon            313..392
                     /gene="Zfp330"
                     /gene_synonym="Noa36; Znf330"
                     /inference="alignment:Splign:2.1.0"
     exon            393..519
                     /gene="Zfp330"
                     /gene_synonym="Noa36; Znf330"
                     /inference="alignment:Splign:2.1.0"
     exon            520..624
                     /gene="Zfp330"
                     /gene_synonym="Noa36; Znf330"
                     /inference="alignment:Splign:2.1.0"
     exon            625..671
                     /gene="Zfp330"
                     /gene_synonym="Noa36; Znf330"
                     /inference="alignment:Splign:2.1.0"
     exon            672..789
                     /gene="Zfp330"
                     /gene_synonym="Noa36; Znf330"
                     /inference="alignment:Splign:2.1.0"
     exon            790..1663
                     /gene="Zfp330"
                     /gene_synonym="Noa36; Znf330"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1639..1644
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp330"
                     /gene_synonym="Noa36; Znf330"
                     /note="hexamer: AATAAA"
     polyA_site      1661
                     /gene="Zfp330"
                     /gene_synonym="Noa36; Znf330"
                     /note="major polyA site"
ORIGIN      
        1 atccggtctc gctcccaccg ttggaaacgg gctgcttctg ccgttctagc ccgcggctcg
       61 ccctctcctc cgcgtcctcg gccactgcga aagaagggaa catgccgaag aaaaagaccg
      121 gtgcgaggaa gaaggcagag aaccgccgag aacgcgagaa acaactgcga gcatcaagaa
      181 gtactgtcga cctagccaaa cacccatgca atgcttcaat ggaatgcgac aaatgtcaga
      241 ggcggcagaa gaatagagca ttttgctatt tttgtaattc tgttcagaag ttaccaattt
      301 gtgcacagtg tgggaaaaca aagtgtatga tgaagtcgtc agactgtgtt atcaagcatg
      361 ctggtgtgta cagtactggc cttgctatgg tgggtgcaat atgtgacttc tgcgaagctt
      421 gggtttgcca tgggaggaag tgtcttagca cccatgcctg tgcctgccca ctcacagatg
      481 cagagtgtgt ggaatgtgag cgaggggtat gggaccatgg aggaagaata ttcagctgtt
      541 cgttttgcca taattttctc tgtgaagatg accagtttga gcatcaagcc agctgccaag
      601 ttttagaagc agaaacattt aaatgtgttt cctgcaatcg acttggccag cattcatgtc
      661 tccgctgtaa ggcttgtttc tgtgatgaac atacaaggag caaagtgttt aagcaagaaa
      721 aaggaaaaca acctccttgc cctaaatgtg ggcatgaaac acaggagaca aaggatctta
      781 gcatgtcaac acgctccttg aaatttggca ggcagactgg aggagaagaa gatggagcct
      841 cagggtatga tgcttactgg aagaacctgt cgtcggacaa gtatggagat actggatacc
      901 atgatgatga tgaggaggag gatgaagcag aggatgaaga ggaagaagat gggaaggact
      961 cagatgctga gtcatcagat ctgttcaata acttgaattt aggaaggacc tatgccagtg
     1021 gctacgctca ctacgaggag caggagagct aggagctgcc ccttgttggc acttgtggga
     1081 agagcaggct gaatctgagg atgctcagat ggaccctccc ttgccttgtc caaaagtcca
     1141 gtcacactgg gctcgggagg ttctcgcagt ttctagggat gctatgtgaa cttgcagtgt
     1201 acgtaaagtg agttagatgt aagacagatg gagcatcatg ggttggatta ttactgagtt
     1261 caataatctg gtgggttttg ccagctagaa acataataaa atacatgata aaggaataga
     1321 aaggaaatat atttatttga aattaaatta ctgcttataa attcatgtct ctgattttac
     1381 aaagtgtaat gggtaaaatt accatattct ttttcttatt tcaatccata caatgagagt
     1441 catgttcagt ttttcactga cttcatgctg ggtaatgttc actctgcatt agcggttgcc
     1501 atgttcaccg ttttcttaca atgtctatcc agtgcttgtt actgtctcac tgacagacag
     1561 aagtctagct gttttcatcc acataatggc aggcagggct agtgttgctg ctgcttcacc
     1621 cagagaatct cattttacaa taaagttagt attatacttg agt
//
