LOCUS       NM_175247               4161 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus zinc finger protein 28 (Zfp28), mRNA.
ACCESSION   NM_175247 NM_009552
VERSION     NM_175247.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4161)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4161)
  AUTHORS   Gustafson,E.A., Seymour,K.A., Sigrist,K., Rooij,D.G.D.E. and
            Freiman,R.N.
  TITLE     ZFP628 Is a TAF4b-Interacting Transcription Factor Required for
            Mouse Spermiogenesis
  JOURNAL   Mol Cell Biol 40 (7), e00228-19 (2020)
   PUBMED   31932482
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 4161)
  AUTHORS   Wiese,C.B., Ireland,S., Fleming,N.L., Yu,J., Valerius,M.T.,
            Georgas,K., Chiu,H.S., Brennan,J., Armstrong,J., Little,M.H.,
            McMahon,A.P. and Southard-Smith,E.M.
  TITLE     A genome-wide screen to identify transcription factors expressed in
            pelvic Ganglia of the lower urinary tract
  JOURNAL   Front Neurosci 6, 130 (2012)
   PUBMED   22988430
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 4161)
  AUTHORS   Guo,G., Huss,M., Tong,G.Q., Wang,C., Li Sun,L., Clarke,N.D. and
            Robson,P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
REFERENCE   5  (bases 1 to 4161)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   6  (bases 1 to 4161)
  AUTHORS   Yajima,I., Kumasaka,M., Thang,N.D., Yanagishita,T., Ohgami,N.,
            Kallenberg,D., Naito,Y., Yoshikawa,T., Sakashita,N. and Kato,M.
  TITLE     Zinc finger protein 28 as a novel melanoma-related molecule
  JOURNAL   J Dermatol Sci 55 (1), 68-70 (2009)
   PUBMED   19329283
  REMARK    GeneRIF: these results suggest that murine and human Zfp28/ZFP28 is
            correlated with the pathogenesis of melanoma.
REFERENCE   7  (bases 1 to 4161)
  AUTHORS   Okazaki,N., F-Kikuno,R., Ohara,R., Inamoto,S., Koseki,H.,
            Hiraoka,S., Saga,Y., Seino,S., Nishimura,M., Kaisho,T., Hoshino,K.,
            Kitamura,H., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: IV. The complete nucleotide sequences of 500 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 11 (3), 205-218 (2004)
   PUBMED   15368895
REFERENCE   8  (bases 1 to 4161)
  AUTHORS   Brady,K.P., Rowe,L.B., Her,H., Stevens,T.J., Eppig,J.,
            Sussman,D.J., Sikela,J. and Beier,D.R.
  TITLE     Genetic mapping of 262 loci derived from expressed sequences in a
            murine interspecific cross using single-strand conformational
            polymorphism analysis
  JOURNAL   Genome Res 7 (11), 1085-1093 (1997)
   PUBMED   9371744
REFERENCE   9  (bases 1 to 4161)
  AUTHORS   Udy,G.B.
  TITLE     Sequence contiguity and allelic structure for the murine zinc
            finger-encoding gene mKr5
  JOURNAL   Gene 148 (2), 347-350 (1994)
   PUBMED   7958967
REFERENCE   10 (bases 1 to 4161)
  AUTHORS   Chowdhury,K., Rohdewohld,H. and Gruss,P.
  TITLE     Specific and ubiquitous expression of different Zn finger protein
            genes in the mouse
  JOURNAL   Nucleic Acids Res 16 (21), 9995-10011 (1988)
   PUBMED   3143103
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY011080.1, AK173170.1 and AW488938.1.
            
            On May 23, 2007 this sequence version replaced NM_175247.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK173170.1, SRR1660821.5445.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-35                BY011080.1         3-37
            36-4143             AK173170.1         1-4108
            4144-4161           AW488938.1         1-18                c
FEATURES             Location/Qualifiers
     source          1..4161
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 3.7 cM"
     gene            1..4161
                     /gene="Zfp28"
                     /gene_synonym="2810438M17Rik; mkr-5; Zfp-28"
                     /note="zinc finger protein 28"
                     /db_xref="GeneID:22690"
                     /db_xref="MGI:MGI:99175"
     exon            1..284
                     /gene="Zfp28"
                     /gene_synonym="2810438M17Rik; mkr-5; Zfp-28"
                     /inference="alignment:Splign:2.1.0"
     CDS             77..2554
                     /gene="Zfp28"
                     /gene_synonym="2810438M17Rik; mkr-5; Zfp-28"
                     /note="protein mKR5"
                     /codon_start=1
                     /product="zinc finger protein 28"
                     /protein_id="NP_780456.2"
                     /db_xref="CCDS:CCDS39752.1"
                     /db_xref="GeneID:22690"
                     /db_xref="MGI:MGI:99175"
                     /translation="MQGMASVVSCEPWALLGRGALCTKARPGGGPAAGTVVAPGSPDR
                     GRPRSRNSLASQDQQGAVTSGTAHKALFSRDTNFLQEINRKQEAAPTGTRHKAKSQGL
                     VTFGDVAVVFSQEEWEWLNSEQRSLYWKVMLDNYRNLASLGLCASQPDMITSLEQGRD
                     PWMMKRKMRKGQHLDLKAMQETKEFPPKDLSEETLFLAVLRKQLLPHRPKCSMVRAAW
                     EGGAVFTTHRGLKTNSGLARDSPAQLVSAQRSFCKSVTWENCGDRGSVGQQSVQEAQD
                     LLPRQDSHAERVTGRTWSTKLECSTFRDQDSECTFERNEQETVTPNRAFSEGRDGMCI
                     ESGRWFHLNSSDERSHNCDSGKSFSSNPVVVKETGICSGKKLFQCNECKKTFTQSSSL
                     TVHQRIHTGEKPYKCNQCGKAFSDGSSFARHQRCHTGKKPYECPECGKAFIQNTSLVR
                     HWRYYHTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPYTCEVCHKSFRYGSSLTVH
                     QRIHTGEKPYECEICRKAFSHHASLTQHQRVHSGEKPFKCKECGKAFRQNIHLASHWR
                     IHTGEKPFECGECGKSFSISSQLATHQRIHTGEKPYECKVCRKAFTQKAHLAQHQKTH
                     TGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPYKCLECGKAFGDNSSCTQHRRLHTG
                     QRPYECVECGKTFKTKSSLICHRRCHTGEKPYECSACGKAFSHRQSLSVHQRIHSGKK
                     PYECKECRKTFIQIGHLNQHKRVHTGERTYNYKKGRRAFRQTAHFAHHQQIHSGKSPA
                     HHSLPSTSNPVDLFSKFVWNPSSLPSS"
     exon            285..376
                     /gene="Zfp28"
                     /gene_synonym="2810438M17Rik; mkr-5; Zfp-28"
                     /inference="alignment:Splign:2.1.0"
     exon            377..503
                     /gene="Zfp28"
                     /gene_synonym="2810438M17Rik; mkr-5; Zfp-28"
                     /inference="alignment:Splign:2.1.0"
     exon            504..599
                     /gene="Zfp28"
                     /gene_synonym="2810438M17Rik; mkr-5; Zfp-28"
                     /inference="alignment:Splign:2.1.0"
     exon            600..760
                     /gene="Zfp28"
                     /gene_synonym="2810438M17Rik; mkr-5; Zfp-28"
                     /inference="alignment:Splign:2.1.0"
     exon            761..875
                     /gene="Zfp28"
                     /gene_synonym="2810438M17Rik; mkr-5; Zfp-28"
                     /inference="alignment:Splign:2.1.0"
     exon            876..4146
                     /gene="Zfp28"
                     /gene_synonym="2810438M17Rik; mkr-5; Zfp-28"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2695..2700
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp28"
                     /gene_synonym="2810438M17Rik; mkr-5; Zfp-28"
                     /note="hexamer: TATAAA"
     polyA_site      2719
                     /gene="Zfp28"
                     /gene_synonym="2810438M17Rik; mkr-5; Zfp-28"
                     /note="major polyA site"
     regulatory      3239..3244
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp28"
                     /gene_synonym="2810438M17Rik; mkr-5; Zfp-28"
                     /note="hexamer: AATAAA"
     polyA_site      3268
                     /gene="Zfp28"
                     /gene_synonym="2810438M17Rik; mkr-5; Zfp-28"
     regulatory      4126..4131
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp28"
                     /gene_synonym="2810438M17Rik; mkr-5; Zfp-28"
                     /note="hexamer: AATAAA"
     polyA_site      4146
                     /gene="Zfp28"
                     /gene_synonym="2810438M17Rik; mkr-5; Zfp-28"
ORIGIN      
        1 cgggggtgtg tccctgagca gcggccttga agggtgtctg cagcctggct aggagagcgt
       61 gcgcccctcg cgtgacatgc agggaatggc gagtgtagtg tcatgcgaac cctgggccct
      121 cctggggcgt ggcgccctct gcacaaaggc caggcctggt ggaggtccgg cggcggggac
      181 tgtagttgct cctgggagcc ccgaccgggg aaggccgcgc tccaggaaca gcctggcctc
      241 ccaggatcag caaggagcag tgacctcggg gaccgcgcac aaagctctgt tttccagaga
      301 taccaacttc ctccaggaga taaaccgcaa acaggaagct gcccctacag ggactagaca
      361 taaagccaag tcgcagggct tggtgacctt tggggatgtg gctgtagttt tctcccagga
      421 ggagtgggaa tggctcaact ctgagcagag gagtctgtac tggaaggtga tgctggacaa
      481 ctacaggaac ctagcatccc tgggactttg tgcttctcag ccagatatga tcacctcgtt
      541 ggaacaagga agggatccct ggatgatgaa aaggaagatg agaaaaggcc agcacctgga
      601 cttgaaggcc atgcaggaga ccaaggagtt ccctccaaag gacttaagtg aggagacatt
      661 attcctggca gtgctaagaa aacagctcct gccccataga cctaagtgct ccatggtacg
      721 ggcagcctgg gagggtggtg cagtgttcac gacacacagg ggcttgaaga ccaactcagg
      781 tctggctaga gacagtcctg cacagcttgt gtcagctcag aggagtttct gtaagagtgt
      841 gacttgggag aactgtggtg accggggctc cgtaggccag cagtctgtac aggaagccca
      901 ggatctgctt ccaaggcagg actcacatgc tgaacgggta acaggcagaa cttggagcac
      961 taaacttgag tgctccactt tcagagatca ggattctgag tgtacgtttg aaaggaatga
     1021 gcaagagaca gtcactccga acagagcctt ctcagagggg agagatggta tgtgtatcga
     1081 atctggaaga tggtttcatt tgaacagttc agacgagaga agtcataact gtgactcagg
     1141 taaaagtttc tcctcaaatc cagtagttgt aaaggaaacc ggaatctgtt caggaaaaaa
     1201 acttttccaa tgtaatgaat gtaagaaaac tttcacccag agctcctccc ttaccgttca
     1261 ccagagaatt catactggag agaagcccta taaatgcaat cagtgtggga aggccttcag
     1321 tgacgggtcc tccttcgcac ggcaccagag gtgccataca ggcaagaagc cgtacgagtg
     1381 cccggagtgt ggcaaagctt tcatacagaa cacctcgctc gttcgtcact ggaggtacta
     1441 tcacactggg gagaaaccct tcgattgcat cgactgtggg aaagccttca gtgaccacat
     1501 agggcttaat caacacagga ggattcacac tggagagaaa ccatacacgt gtgaagtgtg
     1561 tcacaaatcc tttaggtacg gctcatccct cactgtgcac caaaggattc atactggaga
     1621 gaaaccgtac gagtgtgaga tttgcagaaa agccttcagc caccatgcat ccctcactca
     1681 gcatcaacga gtgcattctg gagaaaagcc ttttaaatgt aaagagtgtg ggaaagcttt
     1741 taggcagaat atacaccttg ctagtcactg gaggatccat accggggaga agccctttga
     1801 gtgtggggaa tgtgggaaat ctttcagcat cagctcacag cttgccacgc atcagagaat
     1861 tcatacagga gagaagcctt acgaatgtaa ggtttgtagg aaagcattta cacagaaggc
     1921 tcaccttgca caacatcaga agactcatac gggggagaag ccatacgagt gcaaggaatg
     1981 tggcaaggcc ttcagccaga ccactcacct cattcaacac cagagggttc atactggaga
     2041 gaagccctat aaatgcctgg aatgtgggaa ggcctttggt gataactcat cctgtactca
     2101 acatcggaga cttcacaccg gccagaggcc ttacgagtgt gtggagtgtg ggaagacatt
     2161 caagaccaag tcgtccctta tctgtcatcg tagatgtcac acgggagaga aaccttatga
     2221 gtgcagtgca tgtggtaaag cctttagcca ccggcagtcc cttagtgtac atcagagaat
     2281 tcattcgggg aagaaaccgt atgaatgtaa ggaatgtcgg aaaaccttca tccagattgg
     2341 acaccttaac caacataaga gagtccatac cggggagaga acgtacaact acaagaaggg
     2401 caggagggcc ttcaggcaga ctgcacactt tgctcaccat cagcagattc attccggaaa
     2461 gtcacctgct caccactctt tgccttccac atcgaatcct gtggatctct tctccaaatt
     2521 cgtctggaat ccatcctcac tgccatcatc ataacctcag agcctcgaca tttccaccac
     2581 gctcgtttac cagctcgtct ctctctccct ttgttcattc ttgtccctta tgagtccttc
     2641 atgttacaac caggttggat tatttttgga gtgtaaatgt aattaatttg ctcatataaa
     2701 gcttatattc actggttaat gcctgagatg tgtttagcac agtgcccgat tcataccaag
     2761 tactcagcaa acttgggtct tttgaaagtg gaaaatgcat tctaatcagc tctgatggaa
     2821 acaatgcaat agaatgaggc tcggcgcaac cagcgtttag agcaggaagg gagttctctg
     2881 agttggtgat gaggcttcct tctttttctt gaaaacttgg ttctaagcca agggtatggt
     2941 gcgctcacct gcaatcctag agttcatgga ttcaaggcca gctctaggca acttagtgag
     3001 accctatctc aaaatcaaaa caaaacagct gatcctatag tgctgaactg tatcatggct
     3061 ttggatttga actgcatgat tataaggtaa gcgctcttag tgaggagctt acactgtaca
     3121 cttggcaata gccttaaagg atagtcagcc taagtgtatg taggctactt ggaacaaatc
     3181 aatcaaaata attgggaaaa tgcaaggttt tatacccagg aagttaaatc tcccaacaaa
     3241 taaaactgaa ggatttgatc tatagaaagt cacgggtttg tgaatgcatt cttggtaaac
     3301 ttctaaagaa gtgttaactc tggggtaaac tgagctacag tagagggcag caaactaact
     3361 tgcagtcaga ctctcactga ttccttttgg agggcccata atttaaattt atgaagatat
     3421 gtttatgtgg ttttaaattg gacgaatatt ttcaacataa ttatgtgaaa tttacatctc
     3481 agtgaagtat tggcatgaag gcacaagttt acttacatac tttttgtggt gcttctgtct
     3541 acaaagggaa agttgtcctg tgatgaagac catttgactc agagaggaaa aaaagacaat
     3601 acctgactct ttatggagaa tgtttgctta actgtgcaaa aacagttgtc ctgtttttgt
     3661 aaatagagtt ttattgagcc acacccaggc actggtttac caaacccttt ggttagttgt
     3721 ttacagtggc agaattgagt agctgcactg gagactttct gaccctatag agacacaaat
     3781 acttagagct gaagagtaga ggagagtgta caaaggtttc taacccctcc caccgcaata
     3841 ataagccctg accaaaaaac aaactaaacc aaacaagcca tacaacaaca aaacccccaa
     3901 gaatattagg ccaatgcaat gactcagcag gtaaaggtac ctcttgccaa tcctgatgac
     3961 ccgaatttaa tccttgcaat tcaggtggta gaaggagaga actaattcag gagagtcctc
     4021 caaacttcac acaagtgcta tcacatgcgt accccaaaca catacagtag atatttaaaa
     4081 tacagcttat aaatcaattt atgaagagat gaaaatatta aatgaaataa agtctataaa
     4141 agagaaaaaa aaaaaaaaaa a
//
