LOCUS       NM_031494               6400 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus zinc finger protein 275 (Zfp275), transcript variant
            1, mRNA.
ACCESSION   NM_031494
VERSION     NM_031494.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 6400)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 6400)
  AUTHORS   Wiese,C.B., Ireland,S., Fleming,N.L., Yu,J., Valerius,M.T.,
            Georgas,K., Chiu,H.S., Brennan,J., Armstrong,J., Little,M.H.,
            McMahon,A.P. and Southard-Smith,E.M.
  TITLE     A genome-wide screen to identify transcription factors expressed in
            pelvic Ganglia of the lower urinary tract
  JOURNAL   Front Neurosci 6, 130 (2012)
   PUBMED   22988430
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 6400)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   4  (bases 1 to 6400)
  AUTHORS   Millien,G., Beane,J., Lenburg,M., Tsao,P.N., Lu,J., Spira,A. and
            Ramirez,M.I.
  TITLE     Characterization of the mid-foregut transcriptome identifies genes
            regulated during lung bud induction
  JOURNAL   Gene Expr Patterns 8 (2), 124-139 (2008)
   PUBMED   18023262
REFERENCE   5  (bases 1 to 6400)
  AUTHORS   Raefski,A.S. and O'Neill,M.J.
  TITLE     Identification of a cluster of X-linked imprinted genes in mice
  JOURNAL   Nat Genet 37 (6), 620-624 (2005)
   PUBMED   15908953
REFERENCE   6  (bases 1 to 6400)
  AUTHORS   Faust,C.J. and Herman,G.E.
  TITLE     Physical mapping of the loci Gabra3, DXPas8, CamL1, and Rsvp in a
            region of the mouse X chromosome homologous to human Xq28
  JOURNAL   Genomics 11 (1), 154-164 (1991)
   PUBMED   1684949
REFERENCE   7  (bases 1 to 6400)
  AUTHORS   Herman,G.E., Berry,M., Munro,E., Craig,I.W. and Levy,E.R.
  TITLE     The construction of human somatic cell hybrids containing portions
            of the mouse X chromosome and their use to generate DNA probes via
            interspersed repetitive sequence polymerase chain reaction
  JOURNAL   Genomics 10 (4), 961-970 (1991)
   PUBMED   1916827
REFERENCE   8  (bases 1 to 6400)
  AUTHORS   Herman,G.E., Faust,C.J., Darlison,M.G. and Barnard,E.A.
  TITLE     Genetic mapping of the mouse X chromosome in the region homologous
            to human Xq27-Xq28
  JOURNAL   Genomics 9 (4), 670-677 (1991)
   PUBMED   1674728
REFERENCE   9  (bases 1 to 6400)
  AUTHORS   Mitchell,M., Simon,D., Affara,N., Ferguson-Smith,M., Avner,P. and
            Bishop,C.
  TITLE     Localization of murine X and autosomal sequences homologous to the
            human Y located testis-determining region
  JOURNAL   Genetics 121 (4), 803-809 (1989)
   PUBMED   2721933
REFERENCE   10 (bases 1 to 6400)
  AUTHORS   Avner,P., Amar,L., Arnaud,D., Hanauer,A. and Cambrou,J.
  TITLE     Detailed ordering of markers localizing to the Xq26-Xqter region of
            the human X chromosome by the use of an interspecific Mus spretus
            mouse cross
  JOURNAL   Proc Natl Acad Sci U S A 84 (6), 1629-1633 (1987)
   PUBMED   2882509
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ130997.1, BC138003.1, BY010614.1, AL732461.23 and CF535607.1.
            
            On May 16, 2009 this sequence version replaced NM_031494.1.
            
            Transcript Variant: This variant (1) is the longer transcript and
            encodes the longer isoform (1).
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR10223971.18673.1, BC138002.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-95                CJ130997.1         2-96
            96-713              BC138003.1         1-618
            714-720             BY010614.1         265-271
            721-3937            BC138003.1         626-3842
            3938-5984           AL732461.23        87284-89330
            5985-6400           CF535607.1         1-416
FEATURES             Location/Qualifiers
     source          1..6400
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 37.29 cM"
     gene            1..6400
                     /gene="Zfp275"
                     /gene_synonym="5430431L06Rik; DXBay20; DXHXS52; DXPas8"
                     /note="zinc finger protein 275"
                     /db_xref="GeneID:27081"
                     /db_xref="MGI:MGI:1350985"
     exon            1..132
                     /gene="Zfp275"
                     /gene_synonym="5430431L06Rik; DXBay20; DXHXS52; DXPas8"
                     /inference="alignment:Splign:2.1.0"
     exon            133..208
                     /gene="Zfp275"
                     /gene_synonym="5430431L06Rik; DXBay20; DXHXS52; DXPas8"
                     /inference="alignment:Splign:2.1.0"
     CDS             181..1680
                     /gene="Zfp275"
                     /gene_synonym="5430431L06Rik; DXBay20; DXHXS52; DXPas8"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="zinc finger protein 275 isoform 1"
                     /protein_id="NP_113682.2"
                     /db_xref="CCDS:CCDS30199.2"
                     /db_xref="GeneID:27081"
                     /db_xref="MGI:MGI:1350985"
                     /translation="MSHPCVSFLAPPAPQGLALPQDGAPGNQVLAVPLEMLEAQDLVS
                     FDIVPWHLTEQEWLGLSLNPEQQALAYSRAVTSIGVPVVSPALVSHLSQGQVLLVSDP
                     TLNTDHTKHPESTSATSHQKMGEEAQLQEMASTSSPRANDPSAEVKQNGDSGGRGGSP
                     QNLPIEHHFACKECGDTFRLKVLLVQHQRVHSEEKGWECGDCRKVFRGVSEFNEHRNS
                     HAAVAAQPRPGPSRALEDALEKREQMEREAKPFECEECGKRFKKNAGLSQHLRVHSRE
                     KPFDCEECGQSFKANTHLFRHQKLHTSEKPFACKACSRDFLDRQELLKHQRMHTGHLP
                     FDCDDCGKSFRGVNGLAEHQRIHSGAKPYGCPHCGKLFRRSSELTKHRRIHTGEKPYE
                     CNQCGKAFRQSSSLLEHTRIHSGERPYACGDCGKAFRGPSDLIKHRRIHSGLKPYECD
                     KCGKAFRRSSGLSRHRRIHSGVKRCECSECGRVFKRRSALQKHQPSHRE"
     exon            209..300
                     /gene="Zfp275"
                     /gene_synonym="5430431L06Rik; DXBay20; DXHXS52; DXPas8"
                     /inference="alignment:Splign:2.1.0"
     exon            301..415
                     /gene="Zfp275"
                     /gene_synonym="5430431L06Rik; DXBay20; DXHXS52; DXPas8"
                     /inference="alignment:Splign:2.1.0"
     exon            416..517
                     /gene="Zfp275"
                     /gene_synonym="5430431L06Rik; DXBay20; DXHXS52; DXPas8"
                     /inference="alignment:Splign:2.1.0"
     exon            518..6377
                     /gene="Zfp275"
                     /gene_synonym="5430431L06Rik; DXBay20; DXHXS52; DXPas8"
                     /inference="alignment:Splign:2.1.0"
     regulatory      6356..6361
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp275"
                     /gene_synonym="5430431L06Rik; DXBay20; DXHXS52; DXPas8"
                     /note="hexamer: AATAAA"
     polyA_site      6377
                     /gene="Zfp275"
                     /gene_synonym="5430431L06Rik; DXBay20; DXHXS52; DXPas8"
                     /note="major polyA site"
ORIGIN      
        1 ggaaacgcgc tgccgggctt ctgggctccg ccaggcactg gcggctccgt ggcgcttcct
       61 gccacgccgg gcctgcttac aacgcgcccg ctcttcttct gcaagggccc agagtcaggc
      121 gccgtgggcc gggtgagacc ttccctacag gactaatctc ttggaactgc tctaaacaag
      181 atgagtcatc cctgtgtgtc atttttagct ccgcctgctc cccaaggtct tgcccttccc
      241 caagacggag ccccaggaaa ccaggtcctg gcagtccctc ttgagatgct ggaggcccag
      301 gatttggtgt catttgatat tgtaccgtgg cacctcacag aacaggagtg gctgggtctc
      361 agtttgaacc cggagcagca ggcactggca tattccaggg ctgtgacctc cattggagtt
      421 cctgttgtga gtcctgcttt ggtatctcac ctgtcacaag gacaagttct gttggtatct
      481 gatccaaccc tcaacacaga tcacactaag caccctgaaa gcacctctgc gacttcccac
      541 cagaagatgg gtgaagaagc ccagctgcaa gagatggcgt ccacgagttc cccgagggcc
      601 aatgacccca gcgctgaggt caaacagaat ggggactctg ggggaagggg agggagccca
      661 caaaatctgc ccatagaaca ccattttgca tgtaaagagt gtggggacac cttccgcctt
      721 aaagtgctcc ttgttcagca ccagagggtt cacagtgagg agaagggctg ggagtgtggc
      781 gattgcagga aggtcttcag gggggtgtca gaatttaatg agcacaggaa cagccacgca
      841 gctgtggccg ctcagccccg gcctggcccc agtcgggctc tggaagatgc cttggaaaag
      901 agggagcaaa tggagaggga ggcgaagccc tttgagtgtg aggagtgcgg gaaaaggttt
      961 aagaagaacg caggccttag tcagcacctg agggtgcaca gcagagagaa gccctttgat
     1021 tgtgaggagt gtgggcagtc cttcaaagcc aacacccacc tctttcgaca tcagaagctt
     1081 cacacttcgg aaaagccctt tgcgtgcaag gcgtgcagca gggatttcct ggaccgccag
     1141 gaacttctca agcaccagcg gatgcacaca ggccacctgc ccttcgactg cgatgactgc
     1201 ggcaagtcct tccgtggtgt caacggcctg gcagagcacc agcgcatcca cagcggcgcc
     1261 aaaccctacg ggtgtcctca ctgcggcaag ctgttccgga ggagctcaga gctcaccaag
     1321 caccggagga tccacactgg tgagaagccc tatgagtgca accagtgcgg caaggccttc
     1381 cgccagagct ccagcctgct ggagcacaca cgcatccata gcggtgagcg gccttatgca
     1441 tgcggcgact gcggtaaggc cttccgaggg ccttctgacc tcatcaagca caggcgcatc
     1501 cacagcggac tgaaacccta tgagtgcgac aagtgtggca aggcctttag gaggagctca
     1561 ggcctgagcc gccaccgtcg gatccacagt ggggtcaagc gctgtgagtg cagtgagtgt
     1621 ggccgcgtgt tcaagaggcg ctcggcactg cagaaacacc agccctccca tcgcgagtaa
     1681 acactgccct gggatccata gcaggtgtct gcagaggcta tggctcagtc aaaggagatg
     1741 aacagttctg tagcgcttat ctactttatt ttgtgagagg ttgaaatgat ttatactgcc
     1801 accagcaatt tataaatatc aatgtttccc agtacatcta ttgagagtaa cttttaccac
     1861 ttgaacatag attggctatt tttccaggca ggaagtacta tcaaggtatt tcaatcttca
     1921 catctagaat gagaagaaaa atctgcaaat gggggggtct agtacagagc tgggaggtcc
     1981 ttgccaagct ctatccctga gggaaatgta gtattgttca atggcatcaa tatgaaagga
     2041 aaattgcccc aaggtgttag cctacttgaa tttaatttta gggatgtaaa tagaatgctc
     2101 aaatgccata atatttaatt tattaattta gtaatgcata tgcattgtaa atcacattat
     2161 atgaaataat atattaattt agagaataat ccattttcac catactccct ttgtttccaa
     2221 atactccatg tgcatttttg accttactaa catgggagcc tgtttgagtg atctgagcta
     2281 tggtagcact gtgacaatcc ctgtgtgagg ctctcaccag aagtctcctc ccaagccata
     2341 acaacatatt agtattattc tttgtgtgtt tttaaattag cactgtacct acagcatcac
     2401 cacctaaagt ggtgattttt caaacatcac tcctgggtca tactcctagt aaaacttact
     2461 gggctggaga taaacttttt tcctttcatt ttgctaagcc agttcagtcc agtgacccct
     2521 atgaacaccc caaacaaaca tcagttgggg tttttcctca cacagtatca ttttattcaa
     2581 aagaaagtga gagagcaccc ccaaatgaaa gggacatctt caggacataa aggtaaaatg
     2641 acacctcctc cttggaagat ccttacaaca ctccctccat ttgcagcttt gacgtgggga
     2701 gtagtcacaa tccctacctc ctaagagtct cctaaggagt gtgccttgca tgtaaggata
     2761 ctacctggca aggaagtgta tgtactcagt gaaggtcact tactggcatc ccatagctca
     2821 ttagcaccag aaacagggac ggacccctca agcctcctga ctgctagtct catctttcat
     2881 gcaatgacta caatagtatt tcgggttcct tgcatgcaaa ttatttgttc atctcctttg
     2941 actagttatc aatttacctt ggatatattg actttatata gtagttcttt ctatatcaat
     3001 tgtgatgtta ttttctaatt tttattgctt tgggtttttt gtactttatt acagttttgt
     3061 tgtgtaagtt ttagattttt tttacatatc cttgaattct ttttttatgt taacctgtga
     3121 ctttaattgc ttccatactt acatatgatg atgttttctt tgagaattta tttacagaag
     3181 aaaagttaaa tcgactgccc accaaaaaag tgaccataca aggtgggcag gttggatgag
     3241 agtgggccag agaagcatgc ccaagccaca tccaagatgc agactctctg tgggcagcac
     3301 ttgactatac aacctggcca ctgaggcaca ctagagacat gtctgtcaca cattgctcag
     3361 agcactctgt gactgctcat cattataagc cccagccact agcaacaggg ctcagcttca
     3421 cctataccaa cagaatggtc ccagtgtggc aacagctagc catccttcaa gctgtcggga
     3481 gccttgacta ttttggattc actggctgag cagcagctcc atctaagaaa catctcagac
     3541 acagaagatt gacctgactg gtaatgttat gtaaccttca ttctcctccc aacaagtgac
     3601 tctggaatga gagaactttg tggtttctgc tttgggcaac tagattgaga aatttgccca
     3661 tgtgttctgg catcacttcc taccgtcaca tctaagaggg gtgacatata ggcctggaga
     3721 aaaatggagc tatgttcttc cagtagcctg cacaccatgc cacaaaagct ggttgcacca
     3781 ggtctggtct atgacttgga gtagccatgc ccaagagggc aataaaacaa gatcagagga
     3841 caggaagcca cctgacattc atgtggcaca gaaattgaaa ctgatcacac tgcagttggg
     3901 ccattgcttc aagcaagccc cctcaggaga agaagcagca ggtgaagaag gtggccacat
     3961 cagggctgtg gcctgagttt ccagttgtgc cctgacagat gttgtagggc cagaaaatgt
     4021 gccattattg tcccctagtt agggaggttg ggctctctat ggggcatagc ctgaaagggc
     4081 tttcagcccc atcctgggaa gcaagatcta actgacagtg acctctgatc ttggttagaa
     4141 gggcctctcg aaagccccag gccaccacag tggccctgta gaccttctct atgctggaga
     4201 gaagccaaca acagttgcta catagcaact tctgttgctc tgtgggctca gttctggtgg
     4261 tttcttgtaa accagtctga acccacttct ttctctaatt acttttctca ttgtgagctg
     4321 ttaggacatg ctttttacag ctattattgg gtaaggaatg ttaacatcaa caagggagca
     4381 aatatggcac ctttaccttg aaagaatgcc atttcttgct cagtcactca tcaattgtca
     4441 aggttgacaa aagatattat tgaagtctag aataacacta acttggaagg tagcagtgtg
     4501 agatgccaca gatagggcgt ggcatctctt cccatccctt cctaccctct tttactcttt
     4561 tctagtttgg gttctgtaat tttttttctc tttaacaaaa cctttttcag agttaacact
     4621 aaaaatcggt gtcttttcca tgactgttgt cagatcagct tttaaatggt gttggcagtg
     4681 aaatccccac tctctccaaa tgcagtccgt gttgtggctt taacatgtgg cccatagttg
     4741 catcctttgc cttgggtaat gtgggggtgg atttccttgg atcctctagg tgtacttcta
     4801 tgtccaatgc aaacgtgagc aagcttcttg cagtgtgtgc ttgtctatgc attcgtgtat
     4861 ctacctcatt gcacttttct ttctaaccac atgtattctt gcaagggatg gagagcagct
     4921 ggattaccta atattctggc tgtctataga gatctatccc tttaccatat taagaaagaa
     4981 atactctgtg gcttttatta gttttttaat acttgctgaa gtttttaaaa agcaaatgtt
     5041 taccattttg ctgcttatta tgattaactg tatcaatcgg ttgtatcata tccactcttg
     5101 gatttacaga acaatcccca ccagatcacc agaaagatgg gtgggcattt ttctcccatg
     5161 atattgcatt ctgtgtgctt gattttgtgc ttgaagtggc atgacacctg ccctgcctgc
     5221 agtcctaggc tgtggccctg ttgtatgcca cgtgacttgc cacctcactt ctggaccaca
     5281 ctaattaagc caaccccaga cacctgaccc aaaggcagca acaagcagtc agacctgatt
     5341 gaagaagatg gacttggcct tttagggcta tgaaaagcaa aagaggaaac tgatgtatct
     5401 agttggtatt ggaggcatgg agggacgcac aaggtatttc aaggagttgc tcctggaagt
     5461 agaaccaaag agatcttgct ggcctgccca gagctgcttg ggtcctacca tagcaggcct
     5521 ggctgtatgt tcttggattg ctggcagctg tcttcatcag tctatgtgtg tccccagcat
     5581 agacgcctcc cctcccctgc aatgccgtta gccaacttga atgaaccttg tgcttttttt
     5641 tttttaattt gtcaagagcc aattgcattt gacagttggg ctgcttcccg agaagattct
     5701 cattgctggc ttttctcaca ttctacccat ccagaattcc tggcctaaat ccagttgatt
     5761 gacatgaaca cctatttaaa tgtggtactg tactctgttc actaagatgg gtataaatct
     5821 atgcctttta atttctgggt ttaacccatg atctgtatga gtgtagttcc ttttctgaac
     5881 agcatttgac tcataacacg agctcattat agcccatttt attctatttt tggaagtgtt
     5941 ttactatttt cagcaaaccc gctagattag gggattggtg acacctctat tcctagtgta
     6001 cttacattct gtagttcaca ttacgttgat ttgagtactt tcaaaaatag aagtggtata
     6061 tttgaacatg atcctcagtg ctacttgcgt atctctgaga atagtagttg tgtcctgccc
     6121 agtttgtatt cagttttaga ggcattcttg ttcttcccta gtctgattct cttgttgttt
     6181 tatggcactc actataatca gccttgcact agagttgttt gtggacttgg cttctcctcc
     6241 ccttttttca gccttcccca acctattaga ttgtgagctc ttagaagaca ggggtggccc
     6301 tttatgtcta atcccctacc aaatctagca cagtgccttg catctagtag attttaataa
     6361 atatatgtta aatggcaaaa aaaaaaaaaa aaaaaaaaaa
//
