LOCUS       NM_028335               3682 bp    mRNA    linear   ROD 11-OCT-2023
DEFINITION  Mus musculus zinc finger protein 248 (Zfp248), transcript variant
            1, mRNA.
ACCESSION   NM_028335 XM_132810
VERSION     NM_028335.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3682)
  AUTHORS   Bedogni F and Hevner RF.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3682)
  AUTHORS   Yokoyama S, Ito Y, Ueno-Kudoh H, Shimizu H, Uchibe K, Albini S,
            Mitsuoka K, Miyaki S, Kiso M, Nagai A, Hikata T, Osada T, Fukuda N,
            Yamashita S, Harada D, Mezzano V, Kasai M, Puri PL, Hayashizaki Y,
            Okado H, Hashimoto M and Asahara H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC082571.1 and AC140192.3.
            
            On Dec 11, 2007 this sequence version replaced NM_028335.1.
            
            Transcript Variant: This variant (1) represents the longest
            transcript and encodes the longer isoform (a).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC082571.1, SRR1660815.173846.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164137, SAMN01164138
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3371              BC082571.1         1-3371
            3372-3373           AC140192.3         75024-75025         c
            3374-3682           BC082571.1         3372-3680
FEATURES             Location/Qualifiers
     source          1..3682
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6 55.86 cM"
     gene            1..3682
                     /gene="Zfp248"
                     /gene_synonym="2810037F07Rik; E130106N01Rik"
                     /note="zinc finger protein 248"
                     /db_xref="GeneID:72720"
                     /db_xref="MGI:MGI:1919970"
     exon            1..91
                     /gene="Zfp248"
                     /gene_synonym="2810037F07Rik; E130106N01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            92..326
                     /gene="Zfp248"
                     /gene_synonym="2810037F07Rik; E130106N01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            327..368
                     /gene="Zfp248"
                     /gene_synonym="2810037F07Rik; E130106N01Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             354..2084
                     /gene="Zfp248"
                     /gene_synonym="2810037F07Rik; E130106N01Rik"
                     /note="isoform a is encoded by transcript variant 1"
                     /codon_start=1
                     /product="zinc finger protein 248 isoform a"
                     /protein_id="NP_082611.1"
                     /db_xref="CCDS:CCDS51884.1"
                     /db_xref="GeneID:72720"
                     /db_xref="MGI:MGI:1919970"
                     /translation="MNKSQEQVSFKDVCVDFTKEEWYLLDPAQKVLYRDVILENYSNF
                     VSVGHCVTKPDVIFKIEQGEDPWIPENGFQCHPERKWKVDDLLESNQENQDGHFWPLM
                     FTNKITNLEGGGNTRETPSPDIDSVSSRSFLLKVCDSCEMNLKNVSAVIISKKNYSRK
                     KLNEFNIHKKPLPDSRREKIPVGIKSCDYDGERDGVRLCRDLARPVSHQPFEYNETGQ
                     GFCEEVALCTSQNSQLGETLYKHTECGRTFVDSLKLSVSQKTRLHTELHECSICRKSF
                     YVDLQFGHHTALSGSSPYERNEYEKLFCDGTAFIVHQEAYTRKIAQEYKVSNRTWGKP
                     ALFKHQIIQMGGKPYEYYENRKNFSKKSHPTQPRRPHVGEKTFECGECGKMFWEKSNL
                     TQHQRTHTGEKPYECTECGKAFCQKPHLTNHQRTHTGEKPYECKQCGKTFCVKSNLTE
                     HQRTHTGEKPYECNACRKSFCHRSALTVHQRTHTGEKPFICSECGKSFCVKSNLIVHQ
                     RTHTGEKPYKCNECGKTFCEKSALTKHQRTHTGEKPYECHVCGKTFSQRSVLTKHLRI
                     HTRVKALLAS"
     exon            369..495
                     /gene="Zfp248"
                     /gene_synonym="2810037F07Rik; E130106N01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            496..585
                     /gene="Zfp248"
                     /gene_synonym="2810037F07Rik; E130106N01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            586..3661
                     /gene="Zfp248"
                     /gene_synonym="2810037F07Rik; E130106N01Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgcagtcct gctcctggtc catccgtggc ctcgcgtacc tcctgggaaa caactcctgg
       61 ccttcggcac ggtgcactgc aggagcggcg gctactacta gggagcccac cctcgcaggg
      121 ggcctttgga ctggtcccta gggcgcagtg tttggagtgg aagaggaaag tggttagcta
      181 gccaccaaac ctcctgcccc ctcacacacc cgggatccca gttctgaatt tggttctcgc
      241 tcatgtgttt tgtgaaaatg acagtgtcct gaaaccatgg aagactgtgt gctcgccgaa
      301 agtctgggac aagtttaagg agagagcttt ccctcctcca ctcagagcag aaaatgaaca
      361 aatcccagga gcaagtgtcg ttcaaggatg tatgcgtgga tttcaccaag gaagagtggt
      421 atttgctgga ccctgcccag aaggtgcttt acagagatgt gatcctggag aattatagca
      481 acttcgtctc cgtagggcat tgtgttacta agccagatgt aatcttcaag atagagcaag
      541 gagaagatcc ctggatacca gaaaatggat tccagtgcca cccagaaagg aaatggaaag
      601 tggacgacct attagagagc aaccaggaaa atcaagatgg acatttttgg ccactcatgt
      661 tcaccaacaa gatcacaaac ctagagggtg gaggtaacac aagagaaact cccagtccag
      721 acattgactc tgtatcttca agaagttttc tgctcaaagt atgtgactca tgtgaaatga
      781 atttaaagaa tgtttcagct gtaattatta gcaaaaagaa ctattccaga aagaagctta
      841 acgagtttaa tatacataag aaaccactcc ctgacagtag gcgtgagaag attcctgtag
      901 gaataaagtc atgtgactat gatggggaaa gggatggcgt ccgtctgtgc cgggatctcg
      961 ctcggccagt ttctcatcag ccttttgagt ataacgaaac aggacaaggc ttctgcgagg
     1021 aagtggccct ttgtacaagt cagaactctc agctagggga gactctctat aagcacactg
     1081 aatgtggaag aactttcgtt gacagtttga agcttagtgt atctcagaaa acacgtttgc
     1141 atacagaact tcatgagtgc agtatttgta gaaagtcctt ctatgtggat ttgcagtttg
     1201 gacatcacac agctctctca ggaagcagtc cttacgagcg taacgaatat gagaaactct
     1261 tctgtgacgg tacagctttc atcgtccatc aggaagctta cacgagaaag atcgcccaag
     1321 agtataaagt gagtaacaga acttggggaa agccagctct cttcaaacat cagataatac
     1381 agatgggagg gaaaccctat gaatactatg aaaacaggaa aaatttcagc aaaaaatcac
     1441 atcccaccca gcctcgaaga cctcacgtgg gagaaaagac gtttgaatgt ggtgaatgtg
     1501 gtaaaatgtt ttgggagaaa tcgaacctta cccagcatca gagaacacac accggagaga
     1561 aaccgtatga gtgtaccgaa tgtgggaaag ccttctgcca gaagccacac cttaccaacc
     1621 atcagcggac acacacggga gagaaaccct atgagtgcaa gcaatgcgga aagacgttct
     1681 gtgtcaagtc aaaccttact gagcatcaaa ggacacacac tggggagaaa ccctatgaat
     1741 gcaacgcatg taggaagtcc ttctgccacc ggtcagccct aactgtccat cagagaacac
     1801 atacaggaga gaaaccattc atatgcagtg agtgcgggaa gtcgttttgt gtgaagtcaa
     1861 acctgattgt ccatcagcga actcatacag gggagaaacc ctacaagtgc aacgagtgtg
     1921 ggaaaacgtt ctgtgagaaa tcggcgctca ccaaacacca gagaactcac acaggggaga
     1981 aaccctatga atgtcacgtg tgtgggaaga ccttcagtca gaggtcggta cttaccaagc
     2041 atctgagaat ccacacgagg gtgaaagctc ttttagcatc ctgagtgttt agctttcgca
     2101 tgcctgtcaa gtccattgta gttttaaaaa tgagcttaga gcctgccaaa gaataccaca
     2161 gagtactaga aaataccatc gtgttggaat gcatggaagc tttcaagaaa agaagaaact
     2221 ttcatttgaa agattgtatt gaagggaaat tattcatata aataatatgg taataaactt
     2281 agaaattaaa ttgtataatg tcttccaaat ctgtctttta aatataatgg ttaatattaa
     2341 ttttacttgt attcatagga aagtatgaaa cttaaaaatg agcgtctaca gcattgacca
     2401 tacatgtaaa gacagccggt gtttatagac cttgtgtgag tatgttaatg taacagaagt
     2461 ctaggaaacc ctggatttat gatttattgg aacccagaaa ggatgtgagg aagatgagcc
     2521 cttagtttag caactgttat ggaatacttt cacactaaat accaccagcg tttttatagg
     2581 ttgataggat tatgtacgct tctgaacata tttgtgaatg tgatctagat gtgtgaatat
     2641 gtaaatatac ctgtatgcat gtacctgtac acaaatggtg ttgtcacaaa ggcagctcac
     2701 accatttaaa agtgctgatg attgttaaaa tgtcaggatt tttgtggctc aattgtctaa
     2761 tattacatga aattgcagct caattatact gagagcaaag gaaataaaca acacttgtca
     2821 ttcctaacac tctgctgtat ctcactgctg tcttggctgt gtaccatcgg tctccatgct
     2881 gagagtgctg tagagtggtt cactattgta tatctccttc agttacctcc catgtgtgcg
     2941 tgcacacaca cacacacaca cacacacaca cacacacaca cacacacaca cacgccattg
     3001 ctccgctcat gttggtagct tgcccttagg acgtttatac tgtaggaact gataaagcat
     3061 gtgtcagagc ttgattttct cagagaagcc gtgtgtatat aaactatgtg gtagatttaa
     3121 aatataaact gcccctcttt gtatttccta aaataaataa atggctctgg ccatcattgt
     3181 caaattgcct ctatagtaaa gaagccaaag atggtttact gagcctttta attacctcag
     3241 aactatccag ttctaaatac taccagtctc gatagcttgg tcagtatatg cttcaagtaa
     3301 cattattata ttctctctct ctctctctct ctctctctct ctctctctct ctctctctct
     3361 ctctctctct ctcccccccc ccccttcccc tctctctcac acacacatat attatcacag
     3421 acttttcact attttggacc atgaataagt atggccatta ttaccaaact acccatttgg
     3481 tgaggaaatg aaacagtata tttctgagag tttttcttag ctacctctat gtcaatcata
     3541 tagatgctgt taataaaagt gatatttaca tgacttaact cgagttgtca atggtaatgc
     3601 tacactctac aaatttaaag atggtagtat ataataaaat gttcatatta tacccttgga
     3661 aaaaaaaaaa aaaaaaaaaa aa
//
