LOCUS       NM_001045486            3924 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus zinc finger protein 180 (Zfp180), transcript variant
            1, mRNA.
ACCESSION   NM_001045486
VERSION     NM_001045486.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3924)
  AUTHORS   Shannon M, Hamilton AT, Gordon L, Branscomb E and Stubbs L.
  TITLE     Differential expansion of zinc-finger transcription factor loci in
            homologous human and mouse gene clusters
  JOURNAL   Genome Res 13 (6A), 1097-1110 (2003)
   PUBMED   12743021
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC121271.8, AK141922.1 and BC066115.1.
            
            On Jan 24, 2014 this sequence version replaced NM_001045486.1.
            
            Transcript Variant: This variant (1) encodes the longest isoform
            (a).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC066115.1, AK141922.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-47                AC121271.8         152298-152344
            48-3430             AK141922.1         1-3383
            3431-3920           BC066115.1         3393-3882
            3921-3924           AC121271.8         178107-178110
FEATURES             Location/Qualifiers
     source          1..3924
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 10.27 cM"
     gene            1..3924
                     /gene="Zfp180"
                     /gene_synonym="2310040I01Rik; D130011P11; HHZ168"
                     /note="zinc finger protein 180"
                     /db_xref="GeneID:210135"
                     /db_xref="MGI:MGI:1923701"
     exon            1..342
                     /gene="Zfp180"
                     /gene_synonym="2310040I01Rik; D130011P11; HHZ168"
                     /inference="alignment:Splign:2.1.0"
     exon            343..423
                     /gene="Zfp180"
                     /gene_synonym="2310040I01Rik; D130011P11; HHZ168"
                     /inference="alignment:Splign:2.1.0"
     CDS             373..2340
                     /gene="Zfp180"
                     /gene_synonym="2310040I01Rik; D130011P11; HHZ168"
                     /note="isoform a is encoded by transcript variant 1"
                     /codon_start=1
                     /product="zinc finger protein 180 isoform a"
                     /protein_id="NP_001038951.1"
                     /db_xref="CCDS:CCDS39823.1"
                     /db_xref="GeneID:210135"
                     /db_xref="MGI:MGI:1923701"
                     /translation="MEQQDDESLESLQACVENFVLPQEMIIEVEGEDAGSLDIMPQES
                     TDFKIVTVDLTEEGQSMWNNAQRTPEKTVILEGHRDLWDLPAVHGTEGATAKQTIFNE
                     EPSHGLKLEGSARDDPWLSTCEEVRDCKEQSGKQPNKQEEVAFTQGSAGSPDTVYRGH
                     DPDRSCLSTSRPSFPMIPLRNHFHKQASHVKKLHGDVVASSHQKISDSSDLLEDDTAG
                     AVPQSIRPSQFVSSPQGEEAYELNGHVQASGRGAPRNLNEKVPLEGKTFGFKGRGQVL
                     NHSVVLGGQQELLVKEGQDKCKTAPSPSLPQSLRNYSEEKRFECKYCGKSFSWSSHLI
                     AHQRTHTGEKPYKCNLCGKFFTRSSHVVSHQRIHTGEKPYRCNLCGKSFTQRYVLVVH
                     QRTHTGERPYECTQCGKSFRQSYKLIAHQRTHTGEKPYECTQCGKSFIQSYKLIAHQK
                     IHSGEKPYECSHCGKSFSQSYKLVAHQRTHTGEKPFECNHCGKSFSWSSQLVSHQRTH
                     TGEKPYECNECGKSFNRSSHLVMHQRTHTGEKPYQCKQCGKSFSQSYVLVVHQRTHTG
                     EKPYECGQCGKTFRQSSCFTQHQRTHTGEKPYECNQCGKTFSLSARLIVHQRTHTGEK
                     PYKCGQCGKAFISSSKRSRHQATHSEDACKS"
     exon            424..498
                     /gene="Zfp180"
                     /gene_synonym="2310040I01Rik; D130011P11; HHZ168"
                     /inference="alignment:Splign:2.1.0"
     exon            499..619
                     /gene="Zfp180"
                     /gene_synonym="2310040I01Rik; D130011P11; HHZ168"
                     /inference="alignment:Splign:2.1.0"
     exon            620..3924
                     /gene="Zfp180"
                     /gene_synonym="2310040I01Rik; D130011P11; HHZ168"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gataaccccc tacttccggg tttagccggc agtgcagcca tttgtgtgag tgtgtgtgtg
       61 tgtttgtatg tgtttgtgtg tgtgcgtgcg tgcgtgtgag tgtgtgtgtg tgtatgtgtg
      121 tgaaggcgtc ttctatggct cagctttgtg gctgggctca gtctacacgg agcgacctgg
      181 cggatgctga ctcgaagtgg aagccagacc cccgccactc gagtcatgcc gggtgtgctt
      241 caggatcggg gcaggaagcg gtgagcacag tttcgttctg acgctgagtc gtgagtggct
      301 cagacccgcc ccggtcctca ccacgggctc acggacgtcc agcttggcac cacgccacac
      361 ctggaggaga ccatggagca acaagatgat gagtccctgg agtccctgca ggcctgtgtg
      421 gagaactttg ttctacccca agagatgatc attgaagtgg agggagaaga tgctgggtca
      481 ctggacatca tgcctcagga aagcacagac ttcaagattg taactgtgga ccttacagag
      541 gagggacaga gcatgtggaa caatgcccag agaaccccag agaaaaccgt gatcctggaa
      601 ggccacaggg acctgtggga cttgccagct gtacatggaa cagaaggagc caccgcaaag
      661 cagacaatct tcaatgaaga accatcccat ggattgaagc tagaggggtc ggcaagagat
      721 gacccttggc tgtcaacatg tgaagaagtc cgagactgta aggagcagtc ggggaaacaa
      781 ccgaacaagc aagaggaggt ggcctttacc cagggtagcg ctggctctcc tgatactgtc
      841 tacaggggtc atgaccctga caggagttgc ctgagtacca gccggccttc attccccatg
      901 atacccctca gaaaccattt ccataaacag gcgtcacatg ttaaaaagtt gcatggtgat
      961 gtcgttgcaa gcagtcacca aaagatcagt gatagctcag atctccttga agatgacaca
     1021 gctggggcag ttcctcagag catccgcccc tctcagttcg taagcagccc acaaggagag
     1081 gaagcctatg aacttaatgg ccatgttcaa gcttctggcc gaggtgcgcc ccgaaatcta
     1141 aatgagaaag ttcctttgga aggtaaaacc tttggcttta aagggcgcgg gcaagtttta
     1201 aaccatagcg tggtcctcgg tgggcaacag gagcttcttg ttaaagaggg ccaggataaa
     1261 tgtaaaaccg ccccaagtcc gtctcttcct cagagcctga gaaactactc tgaggagaag
     1321 cgttttgaat gtaagtactg cggcaagtcc ttcagctgga gctcccatct cattgcacac
     1381 caaagaaccc acacagggga aaagccctac aagtgcaacc tgtgtgggaa gttcttcacc
     1441 cggagctcac atgttgtttc tcatcagcgg atccatactg gagagaaacc gtacaggtgc
     1501 aatctgtgtg ggaagtcctt tacccagaga tatgttcttg tggtgcatca gagaactcac
     1561 actggcgaga ggccttatga gtgcacccag tgtgggaagt cgttccgcca gagctacaaa
     1621 ctcatcgcac atcaaagaac ccacacaggg gaaaagccat acgaatgcac ccagtgtggg
     1681 aagtcgttca tccagagtta caagctcatc gcgcaccaga aaattcattc tggagaaaaa
     1741 ccctatgagt gcagtcactg tggcaagtcc ttcagccaaa gctataaact tgttgcacat
     1801 cagaggactc acaccggcga gaagcccttc gagtgtaatc actgtgggaa gtcgttcagc
     1861 tggagctcgc agctggtgtc gcatcagaga acccacacag gagagaaacc ttacgagtgt
     1921 aatgagtgtg ggaagtcatt caaccggagc tcacaccttg tcatgcacca gagaactcac
     1981 actggggaga agccgtatca gtgcaagcag tgcgggaaat ccttcagtca gagctacgtc
     2041 ctcgtcgttc atcagaggac gcacactggg gaaaagccct acgagtgcgg ccagtgtggg
     2101 aagacgttca ggcagagctc ctgctttact cagcatcaga ggactcacac tggagagaag
     2161 ccctacgagt gtaatcagtg tgggaagacg ttcagcctaa gtgcccggct tatcgtccac
     2221 cagcgaactc acactgggga aaagccctac aagtgcggcc agtgtgggaa agcctttatt
     2281 agcagttcga agcgcagtag gcaccaggct actcacagtg aggacgcctg taagtcctga
     2341 ccagttgaga gtcagagctg atgttgactc ctggactgat ccaatcctct caagttatgt
     2401 gggaaggaat gcatttggca ggaagtgaca gtgtgagaag aatgcacata gaccctttcc
     2461 ttacccccat gtcgacgaaa gaaaggagta aagccttcag tttggcagat gtggataaga
     2521 ggtctccgga gaagaaaaac tgttacacac gggctggggt gtgttcttga atgactgtgc
     2581 aggcgtcatc cctaagccaa gctcagaagg ccacttcctg actggcagaa gttgtttccc
     2641 aaagcacttc gtacagagaa ggcagaagct agacttagaa aaactgaatg ttagatcaaa
     2701 tactgcaagt ttagtgcaga agccctctag tttgagttct ggcctggtct ttgagagcac
     2761 agcttctctg ttgcaaagct gacactctgt aaatttagtt caggaggtat gtgttctaaa
     2821 atgctcttac ttaggaaagt aactgctggc catcagcttt gctgtcctgc ctctggctct
     2881 tttccttcat gctactaggt ggctgagcca cgacctccca cctcatctcc ccatcagagt
     2941 cttcagacct actcactgca ggcagacggg tcacttaatc cctcatttat gcaggcttaa
     3001 ccaatcagct tccagtcata gccaaacgta agctcacttg ggagtatctt actgctcttg
     3061 aaagagctgc ttttctatct caaagctttg cttgctcttc tgctgtcctc actagtcatt
     3121 ccgtgccatc aggagacaac ataggagcca ctgccgcaga gtgacgggtg gccattgagt
     3181 tgtcagggcc cgagtcctct aaactaagct cattctcagc caaggaatgg actcccttgc
     3241 cctcaaagcc ccctacagtg ttcctgtgga tgctggccat gagctgcctg tttcaggaaa
     3301 tccacaagca gggtcaagct tggaccagca tggaggtaag cccatgctaa aaccccatca
     3361 ctagtgagtg aagctagagg accattcaag accagcctgt gctacatagc aagactgtct
     3421 tgaaagaaag agaaagaaaa gaaaagaaag gaaacaagct tgtcttatgt gtgctcacac
     3481 acacatatta aatgctggtt cttttccctg aataaagaaa gcactgattt ctgaatctca
     3541 gagaacctaa atctaaaacc aatggccttt cctaaaaaag acttaagtga acagttgact
     3601 ggtgggtgtg ttgtggtgac tcatcttaga ccttccactg gatcacggta tttgaccgtg
     3661 tcagtctgca tagttgccct gattggtagt ttgttatctg ttttgtacac ttctgttaca
     3721 agtgaagatt ttctacaact aaggcaaacg accagttgaa atgaactaca ggaacctgag
     3781 aaaatgttta tgtatagcct gaagttgaaa agggataata atctatttat tgatactgtt
     3841 gtttatgttg ttatctctca gagatgcatg ttgtgctata acatggtaca aggaataaaa
     3901 gtttatcaga agcaaaaaaa gaaa
//
