LOCUS       NM_145483               3809 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus zinc finger protein 160 (Zfp160), mRNA.
ACCESSION   NM_145483
VERSION     NM_145483.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3809)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3809)
  AUTHORS   Guo,G., Huss,M., Tong,G.Q., Wang,C., Li Sun,L., Clarke,N.D. and
            Robson,P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
REFERENCE   3  (bases 1 to 3809)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   4  (bases 1 to 3809)
  AUTHORS   Millien,G., Beane,J., Lenburg,M., Tsao,P.N., Lu,J., Spira,A. and
            Ramirez,M.I.
  TITLE     Characterization of the mid-foregut transcriptome identifies genes
            regulated during lung bud induction
  JOURNAL   Gene Expr Patterns 8 (2), 124-139 (2008)
   PUBMED   18023262
REFERENCE   5  (bases 1 to 3809)
  AUTHORS   Okazaki,N., F-Kikuno,R., Ohara,R., Inamoto,S., Koseki,H.,
            Hiraoka,S., Saga,Y., Seino,S., Nishimura,M., Kaisho,T., Hoshino,K.,
            Kitamura,H., Nagase,T., Ohara,O. and Koga,H.
  TITLE     Prediction of the coding sequences of mouse homologues of KIAA
            gene: IV. The complete nucleotide sequences of 500 mouse
            KIAA-homologous cDNAs identified by screening of terminal sequences
            of cDNA clones randomly sampled from size-fractionated libraries
  JOURNAL   DNA Res 11 (3), 205-218 (2004)
   PUBMED   15368895
REFERENCE   6  (bases 1 to 3809)
  AUTHORS   Pang,A.L., Taylor,H.C., Johnson,W., Alexander,S., Chen,Y., Su,Y.A.,
            Li,X., Ravindranath,N., Dym,M., Rennert,O.M. and Chan,W.Y.
  TITLE     Identification of differentially expressed genes in mouse
            spermatogenesis
  JOURNAL   J Androl 24 (6), 899-911 (2003)
   PUBMED   14581517
REFERENCE   7  (bases 1 to 3809)
  AUTHORS   Agata,Y., Matsuda,E. and Shimizu,A.
  TITLE     Rapid and efficient cloning of cDNAs encoding Kruppel-like zinc
            finger proteins by degenerate PCR
  JOURNAL   Gene 213 (1-2), 55-64 (1998)
   PUBMED   9630514
REFERENCE   8  (bases 1 to 3809)
  AUTHORS   Stubbs,L., Carver,E.A., Shannon,M.E., Kim,J., Geisler,J.,
            Generoso,E.E., Stanford,B.G., Dunn,W.C., Mohrenweiser,H.,
            Zimmermann,W., Watt,S.M. and Ashworth,L.K.
  TITLE     Detailed comparative map of human chromosome 19q and related
            regions of the mouse genome
  JOURNAL   Genomics 35 (3), 499-508 (1996)
   PUBMED   8812484
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK143313.1, AK161712.1, AK078453.1 and BE989157.1.
            
            On Dec 7, 2007 this sequence version replaced NM_145483.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660817.280845.1, BC015291.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-380               AK143313.1         2-381
            381-399             AK161712.1         426-444
            400-2548            AK143313.1         401-2549
            2549-3790           AK078453.1         244-1485
            3791-3809           BE989157.1         1-19                c
FEATURES             Location/Qualifiers
     source          1..3809
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 11.4 cM"
     gene            1..3809
                     /gene="Zfp160"
                     /gene_synonym="6720480D16Rik; F11; HKr18; HZF5; KR18;
                     mKIAA1611; mszf47"
                     /note="zinc finger protein 160"
                     /db_xref="GeneID:224585"
                     /db_xref="MGI:MGI:108187"
     exon            1..46
                     /gene="Zfp160"
                     /gene_synonym="6720480D16Rik; F11; HKr18; HZF5; KR18;
                     mKIAA1611; mszf47"
                     /inference="alignment:Splign:2.1.0"
     exon            47..143
                     /gene="Zfp160"
                     /gene_synonym="6720480D16Rik; F11; HKr18; HZF5; KR18;
                     mKIAA1611; mszf47"
                     /inference="alignment:Splign:2.1.0"
     CDS             129..2081
                     /gene="Zfp160"
                     /gene_synonym="6720480D16Rik; F11; HKr18; HZF5; KR18;
                     mKIAA1611; mszf47"
                     /codon_start=1
                     /product="zinc finger protein 160"
                     /protein_id="NP_663458.2"
                     /db_xref="CCDS:CCDS28434.1"
                     /db_xref="GeneID:224585"
                     /db_xref="MGI:MGI:108187"
                     /translation="MAVTQGQLSFSDVAIEFSQEEWECLDHAQRALHRDVMLENYSNL
                     LSLGVTLPNLNAMSKLEQYKGPWTVESEAIRTRKSNGKEYIRAMSAENINGNEAKSIS
                     SGSSILSSDKILASGDKAPVVHEYDVYSSLRIKGQKATIKGKPYQCKECDKVFSYTSS
                     LAYHRQIHTGEKLYKCLECGKAFFRRSYLLVHERHHTGAKPYKCNECGKVFSQNSHLK
                     SHRRIHTGEKPFKCNHCGKAFSVRSNLTHHQVIHTGDKPYKCNECGKVFSQTSSLTIH
                     RRTHTGEKPYRCNECGKVFSSHSNLNTHQAIHTGEKPYKCSECGKVFTQNSHLANHWR
                     IHTGEKPYKCNECGKAFSVYSSLTTHQAIHTGEKPYKCNECGKVFTQNSHLASHRGVH
                     SGEKPYKCEECGKLFSQTSNLARHWRVHTGEKPYKCSECGKAFSVRSSLIAHQVIHTG
                     EKPYKCTECGKVFSQTSSLSIHQRIHTGEKPYRCNECGKAFNSHSNLNTHQVIHTGQK
                     PYKCMQCGKVFTQNSHLANHQRTHTGEKPYKCNECGKAFSVYSSLTTHQAIHTGEKPY
                     KCNECGKVFTQNSHLASHRRTHTGEKPYQCNKCDKAFSVRSSLTTHQAIHTGEKPYTC
                     SECGKVFSRSSNLTSHQRLHVGQKHM"
     exon            144..270
                     /gene="Zfp160"
                     /gene_synonym="6720480D16Rik; F11; HKr18; HZF5; KR18;
                     mKIAA1611; mszf47"
                     /inference="alignment:Splign:2.1.0"
     exon            271..399
                     /gene="Zfp160"
                     /gene_synonym="6720480D16Rik; F11; HKr18; HZF5; KR18;
                     mKIAA1611; mszf47"
                     /inference="alignment:Splign:2.1.0"
     exon            400..3796
                     /gene="Zfp160"
                     /gene_synonym="6720480D16Rik; F11; HKr18; HZF5; KR18;
                     mKIAA1611; mszf47"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3772..3777
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp160"
                     /gene_synonym="6720480D16Rik; F11; HKr18; HZF5; KR18;
                     mKIAA1611; mszf47"
                     /note="hexamer: AGTAAA"
     polyA_site      3796
                     /gene="Zfp160"
                     /gene_synonym="6720480D16Rik; F11; HKr18; HZF5; KR18;
                     mKIAA1611; mszf47"
                     /note="major polyA site"
ORIGIN      
        1 gcagcgaccc ggaagcggtt ttgctctgca taaattttgt agctgggatt gacttctaaa
       61 cattaatgtt gcacaaggaa gaacctggga gaaggagaag aaagaggaaa taaaaaaaaa
      121 agccagggat ggctgtcact cagggacagt tgtcattcag tgatgtagcc atagagttct
      181 ctcaagagga atgggaatgc ctagaccatg cacagagagc tttgcacagg gatgtcatgt
      241 tggagaatta cagcaacctg ctctccctgg gagtcacact tccaaatttg aatgctatgt
      301 ctaagttgga acaatacaaa gggccctgga ctgtggagag tgaggcaata agaaccagaa
      361 aatcaaatgg aaaggaatat atcagagcta tgagtgcaga aaatattaat ggtaatgaag
      421 ctaagtccat cagcagtggt tcttcaattt tgtcatctga caaaattctt gctagtggtg
      481 acaaagcacc tgttgttcat gaatatgatg tttattcttc actacgtata aaaggacaga
      541 aagccaccat taaggggaaa ccttatcaat gtaaagagtg tgacaaagtc ttcagttata
      601 cttcttcttt agcatatcat cggcagattc atactggaga aaaactttac aagtgtcttg
      661 agtgtggtaa ggcttttttt cgacgttctt atcttttggt acatgagagg catcatactg
      721 gagcgaaacc ttacaaatgt aatgaatgtg gcaaggtgtt cagtcagaat tcacacctta
      781 agagtcatcg aagaatccat actggtgaga aaccattcaa gtgcaatcat tgtggcaaag
      841 cctttagtgt tcgttcaaac ctaactcacc atcaggtaat ccatactgga gataaacctt
      901 ataaatgtaa tgagtgtggc aaggtcttca gtcaaacctc aagcctcaca attcatcgta
      961 gaactcacac tggagagaaa ccttacaggt gcaatgagtg tgggaaagta ttcagttcac
     1021 attcaaacct aaatacccat caggcaatcc atactggaga aaaaccctac aaatgttcag
     1081 agtgtggcaa ggtctttact cagaattcac accttgcaaa tcattggaga atacatactg
     1141 gagagaaacc ttacaagtgt aatgagtgtg gcaaagcctt tagtgtatac tctagcctca
     1201 ctacccatca ggcaatccat acaggagaaa aaccttacaa gtgtaatgaa tgtggcaagg
     1261 tcttcactca aaattcacac ctagctagtc accgtggagt tcacagtggg gaaaagcctt
     1321 acaagtgtga agaatgtggc aaactcttca gccaaacttc aaatcttgca agacattgga
     1381 gagttcacac tggagagaag ccttacaaat gcagtgaatg tggcaaagct tttagtgtgc
     1441 gttctagcct gattgcccat caagtaatcc atactggaga aaagccttat aaatgtactg
     1501 aatgtggcaa ggtcttcagt cagacttcaa gcctttcaat ccatcaaaga attcacactg
     1561 gagagaaacc ttacagatgc aatgagtgtg gaaaagcctt taattcacat tccaacctaa
     1621 atacccatca agtaatccat actggacaaa aaccctataa atgtatgcaa tgtggcaagg
     1681 tctttactca aaattcacat cttgcaaatc atcaaagaac ccatacagga gagaaacctt
     1741 acaaatgtaa tgagtgtggc aaagccttca gtgtgtactc aagtttgact actcatcagg
     1801 caatccatac tggagaaaaa ccttataagt gtaatgaatg tggtaaagtc ttcacgcaaa
     1861 attcacacct agctagtcac cggaggactc atactggaga aaaaccttac cagtgtaata
     1921 agtgtgataa agcctttagt gtgcgttcaa gcttgactac ccatcaggca atccatactg
     1981 gagaaaaacc ttacacatgt agtgagtgtg gcaaagtctt tagtcgaagt tccaacctta
     2041 caagtcatca gagacttcat gttggacaga agcatatgtg aatatagcaa ggtctttggg
     2101 cataattcac ttcttgcata atatccagga atacaatcct aataaaatgt tagtattgtg
     2161 ttgacgataa acacccatca tgagttcaaa tatgtcacta gatgtagtgg tatgcatgta
     2221 caaccaccct tttcagggtg ttgtgggagc attgtctgct tggcatatgt aggaagaact
     2281 tgacctaaat ttaaaaatat atcaagcttt tgtagacata taacatatta agaagacatt
     2341 tcatacatgt agagaagatg cttcaggata tgatttccac ctctataaac ccaaaaatgc
     2401 acattgttga tgaaataatc caattggcac ttattgagga tgttacttaa tgactattta
     2461 cagtggaagg tgaatagaag gagttattca gcctcttgtt tttcatggct aatcttcaat
     2521 gttacattcc acagaataat tgataattac tgaacaatta aaagtcaaaa tagctaaaac
     2581 gtgatatatt tgaaaggttg aagatggttg atacttgcct ttaatattcg tgtactcatt
     2641 tatttatggt tccttgaaaa atctgctttg ccatttgtaa ttgttatctg aaactttctg
     2701 atgatacaat acctgcctca ggggcctttt attgcagcct ttgggaaaaa tagggtaaaa
     2761 agtcacatta atagaaaagg gtcatgtatg tctggttttt gagaatgact ccattccacc
     2821 ttttgaatta agtattggct aagatatgtt cctaatttgt gtttagattc tgtattaaat
     2881 gccatgacta aagctaactt ggtgagaaag tggtttattt catcttatag gttataattg
     2941 atcaagagaa gccaggataa aggctagact aggaacctgg aagcagggac taaggaagaa
     3001 aatggagaaa tgatacctgg tgaattgctt ttcttggctt agcttccttc atacaaccta
     3061 ggaccatgtt ccaaggggtg gcactgccca aagtggtcta tgtcctcata tatcagtaat
     3121 taataaagaa aatacttgac agaaatggcc agagtccaac ctgatgaatg tgaagggtct
     3181 ctcttctcag gaaactctag tttgtgtcaa gttaaaagat ctatccatat catttgtcat
     3241 ctgaaaggga caagatattg taaaattaca gcataaattt atcgtttatt gtatatgatg
     3301 gagcattctg tggggtaaaa gcaattaagt tggaaagaaa tgatctacca tctgatcatt
     3361 ggatacagaa actgccacaa aattaggata ctgcactttt tgtgaaataa gaacagtagg
     3421 ctattaggga tgtggtgttt gtcaaataaa ctgcagaaga cttagtgaac ttctttgagt
     3481 aacaacaggt ttcatattag gaaataataa tttttcttac ttttaaaatt aaagtgaaaa
     3541 acattattag aatggaactt atctcaaaga aattttaggg gctgtgtatg tagctagaaa
     3601 agaaacactt gtgtcatgca tgtgaggccc taagttcaat gttcagcagc accaaaagta
     3661 aaaaaaaata cacaaaacgt ttcttaagag tgacatcatt taactattgt tgttaagttt
     3721 gtccactgtc ttattcaaaa tatatcatta attgaacttg taactaatga aagtaaagct
     3781 tttattttcc tataaaaaaa aaaaaaaaa
//
