LOCUS       NM_001309388            4096 bp    mRNA    linear   ROD 27-MAR-2020
DEFINITION  Mus musculus zinc finger protein 141 (Zfp141), transcript variant
            1, mRNA.
ACCESSION   NM_001309388 XR_105097 XR_404041
VERSION     NM_001309388.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4096)
  AUTHORS   Diez-Roux G, Banfi S, Sultan M, Geffers L, Anand S, Rozado D, Magen
            A, Canidio E, Pagani M, Peluso I, Lin-Marq N, Koch M, Bilio M,
            Cantiello I, Verde R, De Masi C, Bianchi SA, Cicchini J, Perroud E,
            Mehmeti S, Dagand E, Schrinner S, Nurnberger A, Schmidt K, Metz K,
            Zwingmann C, Brieske N, Springer C, Hernandez AM, Herzog S, Grabbe
            F, Sieverding C, Fischer B, Schrader K, Brockmeyer M, Dettmer S,
            Helbig C, Alunni V, Battaini MA, Mura C, Henrichsen CN,
            Garcia-Lopez R, Echevarria D, Puelles E, Garcia-Calero E, Kruse S,
            Uhr M, Kauck C, Feng G, Milyaev N, Ong CK, Kumar L, Lam M, Semple
            CA, Gyenesei A, Mundlos S, Radelof U, Lehrach H, Sarmientos P,
            Reymond A, Davidson DR, Dolle P, Antonarakis SE, Yaspo ML, Martinez
            S, Baldock RA, Eichele G and Ballabio A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol. 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY064292.1, BC063263.1 and CF727770.1.
            
            [WARNING] On May 19, 2023 this sequence was replaced by
            NM_001309388.2.
            
            On or before May 28, 2015 this sequence version replaced
            XR_105097.3, XR_404041.2.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC063263.1, SRR1660815.225336.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164137, SAMN01164139
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-27                BY064292.1         3-29
            28-1265             BC063263.1         1-1238
            1266-1496           CF727770.1         389-619
            1497-4096           BC063263.1         1493-4092
FEATURES             Location/Qualifiers
     source          1..4096
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7"
     gene            1..4096
                     /gene="Zfp141"
                     /note="zinc finger protein 141"
                     /db_xref="GeneID:434178"
                     /db_xref="MGI:MGI:3584269"
     exon            1..144
                     /gene="Zfp141"
                     /inference="alignment:Splign:2.1.0"
     exon            145..212
                     /gene="Zfp141"
                     /inference="alignment:Splign:2.1.0"
     exon            213..480
                     /gene="Zfp141"
                     /inference="alignment:Splign:2.1.0"
     CDS             436..2493
                     /gene="Zfp141"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="zinc finger protein 141 isoform 1"
                     /protein_id="NP_001296317.1"
                     /db_xref="CCDS:CCDS85276.1"
                     /db_xref="GeneID:434178"
                     /db_xref="MGI:MGI:3584269"
                     /translation="MGGHQVLQLPKDRTNGLLTFKDVAIEFSKEEWECLDSAQRTLYR
                     DVMLEIYSILVSVGLSISKPELLTYLEQNEEPYIAKGIEPVLSCFHNKELFKIESKQE
                     SAQREGPGQFGSSRLGKLHVNLPNDMDCNVDQHKTVYENPVGRESHHWLGISEYCHRY
                     QEDNKGLTTDFALHNNHNSQFTEISYQGNDSWNIYKQDVTPSEGQISNCSLENCYNND
                     RCRGVSGQCTQSPLYQQDYSQEKLSTSSQQYKIANECSNCSQCTEIKARREFNRQRYD
                     KYSKVSVESPSIDRDKVNDIQRKPCLFMGSDKSFNFYLNMTQNDSSHTREKPQKYKEY
                     RLEITSPSKLVGHPRSFVQQKYRKSGKCSRSSSDLSRLKMLQPGGTPCKSTECGKSFS
                     QFSGYRENGTIHTGEKPYKCKICKRSFTTGSYLQAHQRIHTGEKPYKCKECGKSFTHG
                     YSLRIHHRFHTGEKPYKCKDCGRSFAEGSSLKSHHRIHTGEKPYKCKECGKSFAKQSN
                     FETHSRIHTGDRPYKCTDCGKSFTRSFCLRKHHKTHTGEKAYKCEECGKAFTQRSTLK
                     THYRIHTGEKPYKCNECGKSFTEGSTLKTHLKIHTGEKPYKCKECGKSFAEASTLKTH
                     HRIHTGEKPYKCTDCGKSFTQSSHLQSHCRIHTGEKPYKCKECGKSFAKDSSLQKHHR
                     IHS"
     exon            481..607
                     /gene="Zfp141"
                     /inference="alignment:Splign:2.1.0"
     exon            608..688
                     /gene="Zfp141"
                     /inference="alignment:Splign:2.1.0"
     exon            689..798
                     /gene="Zfp141"
                     /inference="alignment:Splign:2.1.0"
     exon            799..4096
                     /gene="Zfp141"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggcgcacaa cttcttggat ccagatgtag tttcctgctc ggaccgcttg tgcttggagt
       61 ctggacagtt ggggttgtgc atgtctgcgg gtggacttgg tgccccacgt gctttgtgcc
      121 gggctctgtg agttgcagcg tgagatgtta aagtgacacc aaggagagtg atgttggtgg
      181 atggaggctg gtcatctacc ttaacagcaa agacactaaa cagatgtttc aagatgctgt
      241 gccctttacc gatgtctgag ttgtccacac ttccatcctg atgtccttat gtgggtgaag
      301 atgatcccaa cctggagcca acacagaaaa gcccataacc tgtggtcctc accacctcta
      361 cagcagtgaa ggtctccagt gtcaccctgt ggacccacca cacccagctg aagaaggctc
      421 caggagataa cagagatggg tggtcatcag gtcctccaac ttcctaaaga taggactaac
      481 ggtctgttaa ctttcaaaga cgtggccata gaattctcca aggaggagtg ggaatgcctg
      541 gactctgctc agcggacgtt gtatagagat gtcatgttag agatctacag tatcctggtc
      601 tctgtgggtc tttcaatatc aaaaccagag ctactcacct atcttgaaca aaatgaagaa
      661 ccctacattg caaaaggcat agaaccagtc ctgtcttgct ttcataacaa ggaactgttc
      721 aaaatagaga gcaaacaaga atctgcccag agagaaggac caggacaatt tggaagttcc
      781 aggcttggaa agttacatgt aaatctacct aatgacatgg actgcaatgt agatcaacat
      841 aagactgtgt atgagaatcc agtaggacgt gaaagccatc attggttggg tatttctgaa
      901 tactgccaca gatatcagga agataataaa ggccttacta cagactttgc actgcataat
      961 aaccacaaca gtcagtttac agagatttct taccaaggta acgactcctg gaatatctat
     1021 aaacaagatg taactcctag tgaaggacag ataagtaatt gttctctgga gaattgttac
     1081 aataatgata gatgtagggg tgtctctggt cagtgcacac aatcaccttt gtaccagcag
     1141 gattatagcc aagagaagct gtccacaagc agccagcagt ataaaattgc aaatgagtgc
     1201 tcaaattgta gtcagtgtac tgaaattaag gctagaagag aatttaacag acagagatat
     1261 gataagtaca gcaaagtctc tgttgaatca ccaagcattg atagggataa ggtaaatgat
     1321 attcaaagaa aaccatgcct gtttatggga agtgataaat ccttcaattt ctatttaaat
     1381 atgactcaaa atgattcaag ccatactaga gaaaaacctc agaaatataa agaatataga
     1441 ctggagatta cctctccttc gaaacttgtt gggcatccga gatcctttgt tcaacaaaaa
     1501 tataggaaat ctgggaaatg ctccagaagt tcttcagacc tcagtagact taagatgctt
     1561 caacctggag gaacgccatg caaatctaca gaatgtggga agtccttttc tcagttctca
     1621 ggctacagag agaatggtac aatccatact ggagaaaaac cttataaatg taaaatatgt
     1681 aaaagatctt ttactacagg ttcatatctg caagctcatc agagaatcca cactggtgag
     1741 aaaccatata aatgtaaaga gtgtggcaag tcctttactc acggctattc tcttcgaatt
     1801 catcacaggt ttcatactgg agagaaacct tacaaatgta aagattgtgg caggtctttt
     1861 gccgagggct catctcttaa atcccaccac agaatccata caggagagaa accctacaaa
     1921 tgtaaagaat gtggaaagtc ctttgccaaa caatcaaatt ttgaaactca tagcagaatt
     1981 catactggag atagacctta caaatgtaca gattgtggca agtcctttac caggagcttc
     2041 tgtcttcgaa aacatcacaa aacccatact ggagagaaag cttataagtg tgaagaatgt
     2101 ggaaaggctt ttacccagcg ttcaactctt aagacccact acagaatcca tactggagag
     2161 aaaccttaca aatgtaatga atgtggcaag tcttttactg aaggctcaac tcttaaaacc
     2221 cacctcaaaa tccatactgg agagaaacct tacaaatgta aagaatgtgg caagtctttt
     2281 gctgaggcct caactcttaa aacccaccac agaatccata caggggagaa accttacaaa
     2341 tgcacagatt gtggcaagtc ctttacccag agctcacatc ttcaaagcca ctgcagaatc
     2401 catacaggag agaaacctta caaatgcaaa gaatgtggca aatcttttgc taaggactca
     2461 tctctccaaa aacatcacag aatccattca tgagagagtc tttacagatg taaagaatgt
     2521 tcaaaatcca ttacttggtt ctcaaatctt atagatcatc ctggaatcca tactggaaac
     2581 aaacgttaca aatgcaaaga atgtttgaag tccattacca caggctgtaa atttagaaca
     2641 cattataaaa tttaagcatg agacaaaagc aagggtaatt actgatacac tgttcaccca
     2701 agaagtatgt tttgttttgg ttttgttttg tttttatgaa gaatggatgg aagtctttaa
     2761 ccactcactg ttcaactctt caatattgga gtcacatcag gtatccctat actggtttga
     2821 atttgaaaaa aaatttccag tgtggtggtt tgaatatgct tggctgaggg agtacacaac
     2881 taggaggtgt agccttgttt gaataggtgt ggccttgctg gaggaagtgt gtctctgttg
     2941 gggtaggatt tgagaccctc tttctagtca tctgggagcc agtcttctac tgtttgcctc
     3001 ctgaacaaaa tgtagaactc tcagctcctc ctgtgccgta cctgcctgga ccctgctgta
     3061 ctttctctct tgattatgct ctgagtctct gaacctgtaa gccagctttg attaaatatt
     3121 gttcttttaa gagttgcctt ggtcatgtta tcttttcaca gcaatggaaa ccttaagaca
     3181 ccccaaaatg catcttatat tcactctggt ggtttgactg aaaatagcat acacagacat
     3241 atagggagtg acattagatg gtgtggtctt gttggagtag gtgtggtttt gttggaagaa
     3301 gtatgtcatt ggattgggcc ttgaggtttc agatgctcaa gtgaaaccca ctgtcattct
     3361 ttcttcctgg tgcctgctga tccaaaggta gaaatctcag ctatctctgg agcaccatgt
     3421 ctacctgcat gccactatgt ttcccaccat gaagacaatt tgcaaaaact ctgcatctgc
     3481 aagtcagcca aaataaaata tttttcttta taggagttac tgtagttatg atgtctctcc
     3541 acagcaaaag aaaccctaac taatatattc actaagcaat ttctttgaaa atagactatg
     3601 ccaggcggtg gtggcacatg cctttaatcc cagcacttgg gaggcagagg caggcggatt
     3661 tctgagttca aggccagcct gatccacaaa gtgaattcca ggacagccag ggctatacag
     3721 agaaaccctg tctcgaaaaa caaaacaaaa caaaaccaaa aaacaacaaa aaaaaggaaa
     3781 atgaactaca tatgtactaa tgtttcatac agaattattc tgaaatcaac tactaataat
     3841 ggtatagaat tcatgttata tttgactaaa ctggtaataa tttaaaatgt atgaacttgt
     3901 acctgagtaa gatttctcat aaccatctaa agtcaaaact gttgcataac atttgtatat
     3961 ttcagtggaa caggatattt ttatatgatg aaaagattac tgttgatact atttgagctt
     4021 taagtttttg ttacagattg tttataatgt taaattacct tctttgttcg actacaaata
     4081 aagaaattgg agctta
//
