LOCUS       NM_172462               3916 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus zinc finger protein 11 (Zfp11), mRNA.
ACCESSION   NM_172462 XM_620259
VERSION     NM_172462.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3916)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   2  (bases 1 to 3916)
  AUTHORS   Kenney-Hunt,J.P., Vaughn,T.T., Pletscher,L.S., Peripato,A.,
            Routman,E., Cothran,K., Durand,D., Norgard,E., Perel,C. and
            Cheverud,J.M.
  TITLE     Quantitative trait loci for body size components in mice
  JOURNAL   Mamm Genome 17 (6), 526-537 (2006)
   PUBMED   16783635
REFERENCE   3  (bases 1 to 3916)
  AUTHORS   Okada,A., Kushima,K., Aoki,Y., Bialer,M. and Fujiwara,M.
  TITLE     Identification of early-responsive genes correlated to valproic
            acid-induced neural tube defects in mice
  JOURNAL   Birth Defects Res A Clin Mol Teratol 73 (4), 229-238 (2005)
   PUBMED   15799026
REFERENCE   4  (bases 1 to 3916)
  AUTHORS   Chavrier,P., Lemaire,P., Revelant,O., Bravo,R. and Charnay,P.
  TITLE     Characterization of a mouse multigene family that encodes zinc
            finger structures
  JOURNAL   Mol Cell Biol 8 (3), 1319-1326 (1988)
   PUBMED   2452975
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB623389.1, AK085077.1 and AK032872.1.
            
            On Jan 18, 2007 this sequence version replaced NM_172462.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK085077.1, BC058553.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164137 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-15                BB623389.1         15-29
            16-2372             AK085077.1         2-2358
            2373-3077           AK032872.1         2388-3092
            3078-3916           AK085077.1         3061-3899
FEATURES             Location/Qualifiers
     source          1..3916
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="5"
                     /map="5 68.22 cM"
     gene            1..3916
                     /gene="Zfp11"
                     /gene_synonym="6720465D24; Krox-6; Zfp-11"
                     /note="zinc finger protein 11"
                     /db_xref="GeneID:22648"
                     /db_xref="MGI:MGI:99156"
     exon            1..29
                     /gene="Zfp11"
                     /gene_synonym="6720465D24; Krox-6; Zfp-11"
                     /inference="alignment:Splign:2.1.0"
     exon            30..125
                     /gene="Zfp11"
                     /gene_synonym="6720465D24; Krox-6; Zfp-11"
                     /inference="alignment:Splign:2.1.0"
     CDS             116..2059
                     /gene="Zfp11"
                     /gene_synonym="6720465D24; Krox-6; Zfp-11"
                     /note="protein Krox-6.1A/6.1B+/6.1B-; zinc finger protein
                     Krox-6.1A/6.1B+/6.1B-"
                     /codon_start=1
                     /product="zinc finger protein 11"
                     /protein_id="NP_766050.1"
                     /db_xref="CCDS:CCDS39291.1"
                     /db_xref="GeneID:22648"
                     /db_xref="MGI:MGI:99156"
                     /translation="MSPENLSDCNNSVKDFDQHPELTIRQCVHREKPYKQEECDDSAC
                     DQHLRVHKGGMPYECKDCGKAFKYRSVLYQHRIIHTAARPYKCKECGKAFKRSRNLAQ
                     HQVTHKREKPHKCEECGRAFSALSVLTQHRITHTGEKPFKCKECGRAFKYNSTLTQHE
                     VIHTEAKPYRCQECGKAFKRSHTLSQHQVIHKGEKPHKCDECGRAFSKHSSLTQHQVI
                     HTGEKPYQCRECGKAFRYQSTLTRHHIVHTGAKPYKCPECDKAFNNSSTLSRHQIIHT
                     GEKPYKCQECGRAFYCSSFLIQHMKIHFEEMPYRCRECGKPFRLSSQLIRHQRIHTGE
                     EPYICRECGKTFKYQSNLTRHQILHTGAKPYKCPECGKAFNNSSTLTRHQIIHTGEKP
                     YKCQECSKAFYCSSYLIQHMKIHFEEIPYRCKECGKPFKCSSQLIRHQRIHSGEKPYI
                     CKECGKAFNCTSYLTKHQRIHTGEKPYVCQECGKAFNCSSYLSKHQRIHIGDRLYKCK
                     ECGKAYYFSSQLNRHQRIHTGEKPYVCQECGKAFNCSSYLTKHQRIHIVEKPYVCKEC
                     SKAFSCSSYLTKHQRIHAGDRLYKCTECGKAYCFSSQLNRHQRIHTRERPYRCKECGK
                     AFITSSCLKRHQETHTLQTPNSV"
     exon            126..3916
                     /gene="Zfp11"
                     /gene_synonym="6720465D24; Krox-6; Zfp-11"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3604..3609
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp11"
                     /gene_synonym="6720465D24; Krox-6; Zfp-11"
                     /note="hexamer: AATAAA"
     polyA_site      3633
                     /gene="Zfp11"
                     /gene_synonym="6720465D24; Krox-6; Zfp-11"
                     /note="major polyA site"
ORIGIN      
        1 gaaaagatcc gttccggaat cgggacaagg tcttgctgtg tgtaagccct acctggtcac
       61 gctgctggag cagaaacaag agctttggga tgtgaaggga caggagtcag gaatcatgtc
      121 cccagagaat ctttctgact gtaacaactc tgtaaaagac tttgatcaac acccagaact
      181 taccatccgg caatgtgtgc acagagagaa gccgtacaag caggaagaat gtgatgactc
      241 agcttgcgat cagcatctca gggtgcataa aggaggcatg ccctatgaat gcaaagactg
      301 tgggaaagcc tttaaatacc gctcggtcct ctaccaacac cgcatcattc acacggccgc
      361 aagaccctac aaatgtaaag agtgcggcaa agctttcaag agaagtagaa acctcgctca
      421 gcaccaggtg acacacaaga gggagaaacc acacaagtgt gaagagtgcg gcagagcctt
      481 ttctgcactt tctgtcctta ctcaacaccg catcacccac accggagaga agcccttcaa
      541 gtgtaaagag tgcggcagag cctttaaata taactcgacc cttactcagc atgaagtcat
      601 tcatactgaa gccaaaccct acagatgtca ggaatgtggc aaagccttca agaggagcca
      661 cacgctcagt caacaccagg taattcataa aggggagaaa ccgcacaagt gtgacgagtg
      721 tggcagggcc ttcagtaagc actcgtctct tacacaacac caggtcatcc acaccggaga
      781 aaagccctat cagtgcagag agtgcgggaa agcgttcagg tatcaatcaa cccttacccg
      841 acaccacatt gttcacaccg gcgccaaacc ctacaaatgc ccagagtgcg acaaggcctt
      901 caataacagt tcgaccctca gtcggcacca gataatccac acaggagaga agccctacaa
      961 gtgtcaggag tgcggccggg ccttctactg ctcctccttc ttgatccagc atatgaagat
     1021 ccacttcgag gagatgccct acaggtgcag agagtgtggc aagcccttca ggctctcctc
     1081 ccagcttatc cgacaccaga gaatccacac cggggaggag ccctacatat gcagagagtg
     1141 tggcaagacc ttcaagtatc agtcaaacct cacccgccac cagatacttc ataccggcgc
     1201 caagccctac aaatgcccag agtgcggcaa ggccttcaat aacagttcca ccctcacccg
     1261 gcaccagata atccacacag gagagaagcc ctacaagtgt caggagtgca gcaaggcctt
     1321 ctactgctcc tcctacttga tccagcatat gaagatccac tttgaagaga ttccctatag
     1381 atgcaaagaa tgtggtaaac cgttcaagtg ttcttcacag cttatccgac accagagaat
     1441 ccacagcggg gagaaaccct atatatgtaa ggagtgcggc aaggccttca actgtacttc
     1501 ataccttact aagcaccaga ggatccatac cggggagaaa ccctacgtgt gtcaggagtg
     1561 tggcaaggcc ttcaactgtt cttcctatct ctctaaacat cagaggattc acattggaga
     1621 cagactctat aaatgtaaag agtgtggcaa agcctactac ttctcctcac agctgaaccg
     1681 acatcagagg atccataccg gggagaaacc ctatgtgtgc caggagtgtg gcaaggcctt
     1741 caattgttct tcatacctta ctaagcacca gcgcatccat attgtagaaa aaccgtatgt
     1801 gtgtaaagag tgcagcaaag cctttagctg ctcctcatac ctgactaaac accagaggat
     1861 ccatgctgga gacaggctat acaaatgcac agagtgtggc aaagcctact gcttctcctc
     1921 acagctgaac cgacatcaga ggatccacac cagagagaga ccctatagat gtaaggaatg
     1981 tggcaaggcc tttattactt cctcctgcct taaacgacac caggaaactc acactctcca
     2041 gacaccaaac agtgtataga atttgtgtat atgtgtatgt gtataataag caaagcctta
     2101 ctaggaagac agttgttacc gagtgtttca taaaagggaa aaaaccctgt tcttgcactt
     2161 agtgtcttta acaactgctg aaccttccat ttgcaccaaa aaggcccatc tatgagggga
     2221 gacgatacag gtgtaaggag tctggcaaga cctttaagtc gtgtgtggta ctgtttcaga
     2281 gtgtgtactg aacatcccat agttgaaaac tgttacagat gtgagaacat ggcctggcct
     2341 ttgatcacag cttttctttt ttcttttttt tttttaagat ttatttattt atttattctg
     2401 tgtatgtgag tacactgtag ctgtacagat ggttgtgagc cttcatgtgg ttgttgggaa
     2461 ttgaatttag gacttctgct cgctctggtt ggccctgctc cctcggtctc tgctcgctct
     2521 ggcccaaagg tttatttatt attatacata agtacactgt agctgtcttc agacacacca
     2581 caagagggca tcagatctca ttacaggtga ttgtgagcca ccatgtggtt gctgggattt
     2641 gaacacagga ccttcggaag aacagtcagt gctcttatcc cctgagccat ctcaacagcc
     2701 cgatcactgc tcttctttat tggacagtag caaattcata ttgggaagag tattgtccta
     2761 tgtctaaccc tcagaacagt ccaacactat actacaaatt ccctcataaa atgaaaagat
     2821 tgacatttca ctaatacctc aacaaatctt tttattacag acaggatctc tgtaatagcc
     2881 ctagaactca ctctgtagac caggctagcc tcagactcac agagatctgc ctgcctctgt
     2941 gtccagagca ctgggactaa agacatgcac ccccaggccc agcccatacc tcaaaacttg
     3001 gtgtatacaa aaaattatcg ttgggcagaa atcttacaaa tatgtagaat gtggcaaaat
     3061 tttgaactgc tgcttatcat taataaatgg gtggaaagac tatatcacag gtgtcagagt
     3121 gatttgaact catctttgaa aggatggaat ttgttttaca tccaaattta ctaagtaacc
     3181 tcactttaaa aactatacaa agctcagccc tcaggccatc tcagcagaaa aataatcctg
     3241 ctttctgaga agttttaaac cgttcttttt ctagagagca tagaattgat tttgaagaac
     3301 tgtgtattat gtatagactt tattttagta catacatgga gtgaatggtt cttcacttgt
     3361 tatctctggt atgtgttgtt tgacatgtta ttttgtcaca gagatcaaac cgccttaccg
     3421 tagcatgtac atacagatct tagtaatata ttgttgagaa atactgagtg attggtagtt
     3481 cttgttccca atgtctttat ccctcaaaca gatgtataga tttggagatt ttttttgtgt
     3541 atgtgatatt ttaatccacc ctttttgcac ttaacccaga aattacaaag gatgtgaaag
     3601 tataataaag tgttctagct ttctgaagct caagtcattt atacatttgg ttttttgtca
     3661 catggttttt atgcacacat cacccctttg gatatataca atgaacaccg aattgttggt
     3721 attcgtttgt gttgactgtg acgtaaaatc ccatggcaaa ccttaggagt gaaagtacaa
     3781 aagttctctc tgctcgtggg taatgattaa aaattaaagg aaagttaaaa accaaaaatc
     3841 actttaaggg agctgatatt tatggcgagg tagaaagctt ttgtttgggg gaataaagtc
     3901 tattttgtct aaatgg
//
