LOCUS       NM_020262               2747 bp    mRNA    linear   ROD 25-MAR-2020
DEFINITION  Mus musculus zinc finger protein 109 (Zfp109), mRNA.
ACCESSION   NM_020262
VERSION     NM_020262.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2747)
  AUTHORS   Sharov AA, Piao Y, Matoba R, Dudekula DB, Qian Y, VanBuren V, Falco
            G, Martin PR, Stagg CA, Bassey UC, Wang Y, Carter MG, Hamatani T,
            Aiba K, Akutsu H, Sharova L, Tanaka TS, Kimber WL, Yoshikawa T,
            Jaradat SA, Pantano S, Nagaraja R, Boheler KR, Taub D, Hodes RJ,
            Longo DL, Schlessinger D, Keller J, Klotz E, Kelsoe G, Umezawa A,
            Vescovi AL, Rossant J, Kunath T, Hogan BL, Curci A, D'Urso M, Kelso
            J, Hide W and Ko MS.
  TITLE     Transcriptome analysis of mouse stem cells and early embryos
  JOURNAL   PLoS Biol. 1 (3), E74 (2003)
   PUBMED   14691545
REFERENCE   2  (bases 1 to 2747)
  AUTHORS   Shannon M, Hamilton AT, Gordon L, Branscomb E and Stubbs L.
  TITLE     Differential expansion of zinc-finger transcription factor loci in
            homologous human and mouse gene clusters
  JOURNAL   Genome Res. 13 (6A), 1097-1110 (2003)
   PUBMED   12743021
REFERENCE   3  (bases 1 to 2747)
  AUTHORS   Mu X, Zhao S, Pershad R, Hsieh TF, Scarpa A, Wang SW, White RA,
            Beremand PD, Thomas TL, Gan L and Klein WH.
  TITLE     Gene expression in the developing mouse retina by EST sequencing
            and microarray analysis
  JOURNAL   Nucleic Acids Res. 29 (24), 4983-4993 (2001)
   PUBMED   11812828
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BI991105.1, BC119620.1 and CN668934.1.
            
            [WARNING] On Apr 26, 2023 this sequence was replaced by
            NM_020262.4.
            
            On Mar 5, 2008 this sequence version replaced NM_020262.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF167316.1, BC119620.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849382
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on computational evidence
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-373               BI991105.1         1-373
            374-2561            BC119620.1         1-2188
            2562-2747           CN668934.1         309-494
FEATURES             Location/Qualifiers
     source          1..2747
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7"
     gene            1..2747
                     /gene="Zfp109"
                     /note="zinc finger protein 109"
                     /db_xref="GeneID:56869"
                     /db_xref="MGI:MGI:1929099"
     exon            1..516
                     /gene="Zfp109"
                     /inference="alignment:Splign:2.1.0"
     exon            517..574
                     /gene="Zfp109"
                     /inference="alignment:Splign:2.1.0"
     CDS             560..2494
                     /gene="Zfp109"
                     /codon_start=1
                     /product="zinc finger protein 109"
                     /protein_id="NP_064658.1"
                     /db_xref="CCDS:CCDS39827.1"
                     /db_xref="GeneID:56869"
                     /db_xref="MGI:MGI:1929099"
                     /translation="MTKLQEAVTFRDVAVVFSEEELGLLDAAQRKLYHDVMLENFRNL
                     LAVGGQVPNKMENLHTTGVRCLSLGQLPCGHMASHDANKLARAPEGVINTQGMVSYFP
                     EQCHFSCHRGPEEPPWASKDNGCLEILTNDHSSITESQKFLSGIAQCSWSKKHLSKRQ
                     NYQKHCVQTPVKTKPRRLLAPGIDRMSCVSHQDNNTLHKGDKGQSNSDFDKLTFPVSP
                     VTPHHVYTERKSYKCSKAQEAFIDRPTLELHQQDLVGKKSPVRSTYEVSRHSSIQKSV
                     HAGTKRYWCHECGKAFSQSSALQTHRRVHTGEKPYRCDSCGKAFTQWSVLHAHQRIHT
                     GEKPYKCGDCGRRFRFSSNLHIHQRVHTGEKPYKCHVCGKCFRFRFYSHQRVHTGEKP
                     YKCDECGKGFTSASNVKVHQRVHTGVKPFCCNVCGKCFSRSFHLHTHQRVHTGEKLYK
                     CDACGKAFSQRSSLQVHRLIHTGEKPYKCEECGKGFTSASSFQGHQRVHTGEKPFHCD
                     VCGKDFSRSSYLQIHQRMHTGEKPYKCDSCGKAFSQRAHLQVHQRTHTGEKPFKCEEC
                     GKEFRQRSGLSSHQIVHKEEKPYTCWECGKGFSQPSLFERHRRVHTGERPYICGTCCK
                     GFSQRSHLVKHQRVHSAANL"
     exon            575..701
                     /gene="Zfp109"
                     /inference="alignment:Splign:2.1.0"
     exon            702..2747
                     /gene="Zfp109"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tccctgagtg tcccgtgggg acagagtctg tggaccggga gaagcaggca gtggtggtgg
       61 ctgcggcggc gaccggttct ctctagctgg gctcttcctg aggtggcgct gccagggatt
      121 cctggaccca tctcagctgc tcctggagcc ccggggagag tctagcttcc catgggagcc
      181 tggtagagga gctgtggtga cagatggcca gtgtcctaaa gccttaagtg gtacgcaact
      241 ctggttttga tgtgactttt ttttttgcat ttatttattt gtttatttac ttaaagagtg
      301 gggcgtgcca cagcttataa aaagtgggag tagagtcact cctccaccat gtggggtcca
      361 gagactcgaa ttcagctgac caggctccac cacagtacat gtactccttg agccatatcg
      421 caggggcaaa aactcccttt taaagaaagg gttcaggttt ttgttggtcc ttatttcatg
      481 cacgcgggaa tggagacttt ttggaggctt tttcagcttg cttcccagag ccctgccttg
      541 tctcaaagag aagagaacaa tgaccaagtt acaggaggca gtgaccttca gggacgtggc
      601 cgtggtcttc agcgaggagg agctggggct gctggacgct gctcagagga agctgtacca
      661 cgatgtgatg ctggagaact tcaggaacct cctggcagtg ggaggccaag ttccaaacaa
      721 gatggagaac cttcatacaa caggagtaag atgcctttca ctggggcaac ttccatgtgg
      781 gcacatggca agccatgatg ccaacaagct ggccagagct ccagaagggg taatcaacac
      841 tcaaggaatg gtatcctact tcccagagca atgccatttc tcctgccaca ggggaccaga
      901 ggagcctccc tgggcctcca aggacaatgg ctgtcttgag attctcacaa atgatcattc
      961 tagcattact gaaagtcaga aatttctgtc tgggattgct cagtgttctt ggagtaaaaa
     1021 acatcttagc aagagacaga actatcagaa acactgtgtg cagactccag tgaaaaccaa
     1081 gccacgacgg ctcttggctc caggtattga cagaatgagt tgtgtttccc atcaagataa
     1141 caatacactg cataaaggag acaaaggcca gagcaacagt gactttgata aacttacctt
     1201 tcctgtgtca cctgtcaccc cgcatcatgt ttacacagaa agaaagtcct acaaatgcag
     1261 caaggcccaa gaggccttca ttgacagacc tactctagaa ctccatcagc aggaccttgt
     1321 aggaaaaaag tcccctgtac gtagtacata cgaagtctcc agacatagct ccattcaaaa
     1381 gagtgttcat gcaggaacaa agcgctactg gtgtcacgag tgtggcaagg ccttcagtca
     1441 gagctcagca cttcagactc accggagagt gcacacaggg gagaagccct acaggtgcga
     1501 cagctgtggg aaggccttca cacagtggtc agtcctccat gcccaccaga gaattcacac
     1561 aggagagaag ccatataagt gtggagactg tggcagacgc ttcaggttta gctcaaacct
     1621 gcacatccac cagcgagtcc acactgggga gaaaccgtac aaatgccacg tgtgtgggaa
     1681 gtgtttcaga ttcagatttt acagccatca gcgggtccac acaggagaga agccatataa
     1741 gtgtgacgag tgcgggaagg gtttcacttc agcctcaaac gtcaaagtcc accagcgggt
     1801 ccacacggga gtgaagccgt tttgctgcaa tgtctgtggg aaatgcttca gtcggagctt
     1861 tcatcttcac actcaccaga gagtgcacac gggggagaag ctctacaaat gtgacgcgtg
     1921 tgggaaagcc ttcagccaga gatccagtct ccaagtccat cggctaattc acacaggaga
     1981 gaagccatat aagtgtgaag agtgtgggaa gggtttcact tcagcctcaa gcttccaagg
     2041 acaccagcgg gtccatacag gagagaaacc atttcattgc gatgtgtgtg ggaaagactt
     2101 tagccggagc tcatatcttc agattcacca gagaatgcac acgggagaga agccctacaa
     2161 atgcgacagc tgtgggaaag ccttcagcca gagggcccat ctccaagtcc accagagaac
     2221 tcacaccggg gagaagccgt tcaagtgtga ggagtgtggg aaggaattca ggcagcgttc
     2281 ggggctgagt tctcaccaga tagtccacaa ggaagagaaa ccctacacgt gttgggagtg
     2341 tgggaagggt ttcagtcagc cctcactctt cgaaagacac cggcgggtcc acactgggga
     2401 aaggccctac atctgcggca cctgctgcaa aggcttcagc cagagatcgc atctcgtcaa
     2461 acaccagagg gtccacagtg cagcgaatct ctaggtttgt tctgctgtcg ggtgggctcc
     2521 atgctgctgc ttgttaaaag cctcccttaa acccagaagc gttagcagat ttcactgggg
     2581 attatatttt ggttattttc ccatgaagtc tttatcttac tgtacctcat ttcattatgc
     2641 aaagggaaga ccgtatttta gaatggatct tagaatacaa agtaaacaaa ttcaaaactt
     2701 atatagagaa gatcggattt ctaattttct atctaattta atatctg
//
