LOCUS       NM_001037665            1900 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus zinc finger protein 1 (Zfp1), transcript variant 1,
            mRNA.
ACCESSION   NM_001037665
VERSION     NM_001037665.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1900)
  AUTHORS   Albertsen,M., Teperek,M., Elholm,G., Fuchtbauer,E.M. and
            Lykke-Hartmann,K.
  TITLE     Localization and differential expression of the Kruppel-associated
            box zinc finger proteins 1 and 54 in early mouse development
  JOURNAL   DNA Cell Biol 29 (10), 589-601 (2010)
   PUBMED   20624068
  REMARK    GeneRIF: Taken together, this suggests a role for ZFP1 and ZFP54 in
            transcriptional regulation in early development.
REFERENCE   2  (bases 1 to 1900)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   3  (bases 1 to 1900)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   4  (bases 1 to 1900)
  AUTHORS   Becker-Follmann,J., Gaa,A., Bausch,E., Natt,E., Scherer,G. and von
            Deimling,O.
  TITLE     High-resolution mapping of a linkage group on mouse chromosome 8
            conserved on human chromosome 16Q
  JOURNAL   Mamm Genome 8 (3), 172-177 (1997)
   PUBMED   9069116
REFERENCE   5  (bases 1 to 1900)
  AUTHORS   Danciger,M., Brady,J., Adamson,M.C., Farber,D.B., Piatigorsky,J.
            and Kozak,C.A.
  TITLE     Chromosomal localization of the genes for five zinc finger proteins
            expressed in mouse lens
  JOURNAL   Genomics 28 (1), 39-43 (1995)
   PUBMED   7590745
REFERENCE   6  (bases 1 to 1900)
  AUTHORS   Ashworth,A. and Denny,P.
  TITLE     Zinc finger protein genes in the mouse genome
  JOURNAL   Mamm Genome 1 (3), 196-200 (1991)
   PUBMED   1797234
  REMARK    Review article
REFERENCE   7  (bases 1 to 1900)
  AUTHORS   Nadeau,J.H., Birkenmeier,C.S., Chowdhury,K., Crosby,J.L. and
            Lalley,P.A.
  TITLE     Zinc finger protein gene complexes on mouse chromosomes 8 and 11
  JOURNAL   Genomics 8 (3), 469-476 (1990)
   PUBMED   1981050
REFERENCE   8  (bases 1 to 1900)
  AUTHORS   Hsieh,C.L., Cheng-Deutsch,A., Gloor,S., Schachner,M. and Francke,U.
  TITLE     Assignment of Amog (adhesion molecule on glia) gene to mouse
            chromosome 11 near Zfp-3 and Asgr-1,2 and to human chromosome 17
  JOURNAL   Somat Cell Mol Genet 16 (4), 401-405 (1990)
   PUBMED   1699290
REFERENCE   9  (bases 1 to 1900)
  AUTHORS   Thiesen,H.J.
  TITLE     Multiple genes encoding zinc finger domains are expressed in human
            T cells
  JOURNAL   New Biol 2 (4), 363-374 (1990)
   PUBMED   2288909
REFERENCE   10 (bases 1 to 1900)
  AUTHORS   Chowdhury,K., Dietrich,S., Balling,R., Guenet,J.L. and Gruss,P.
  TITLE     Structure, expression and chromosomal localization of Zfp-1, a
            murine zinc finger protein gene
  JOURNAL   Nucleic Acids Res 17 (24), 10427-10438 (1989)
   PUBMED   2574853
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            X16493.1, BC062970.1 and BF719052.1.
            
            On Jun 27, 2006 this sequence version replaced NM_001037665.1.
            
            Transcript Variant: This variant (1) encodes the longest protein
            (isoform 1).
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC055796.1, AK147054.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-91                X16493.1           110-200
            92-1328             BC062970.1         1-1237
            1329-1559           BF719052.1         1-231               c
            1560-1900           BC062970.1         1469-1809
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="8"
                     /map="8 57.98 cM"
     gene            1..1900
                     /gene="Zfp1"
                     /gene_synonym="Fnp-1; mkr-1; Zfp-1"
                     /note="zinc finger protein 1"
                     /db_xref="GeneID:22640"
                     /db_xref="MGI:MGI:99154"
     exon            1..170
                     /gene="Zfp1"
                     /gene_synonym="Fnp-1; mkr-1; Zfp-1"
                     /inference="alignment:Splign:2.1.0"
     exon            171..226
                     /gene="Zfp1"
                     /gene_synonym="Fnp-1; mkr-1; Zfp-1"
                     /inference="alignment:Splign:2.1.0"
     CDS             212..1423
                     /gene="Zfp1"
                     /gene_synonym="Fnp-1; mkr-1; Zfp-1"
                     /note="isoform 1 is encoded by transcript variant 1;
                     protein mKR1"
                     /codon_start=1
                     /product="zinc finger protein 1 isoform 1"
                     /protein_id="NP_001032754.1"
                     /db_xref="CCDS:CCDS22678.1"
                     /db_xref="GeneID:22640"
                     /db_xref="MGI:MGI:99154"
                     /translation="MMGSQGSVSFTDVTVDFTQEEWEQLDPSQRILYMDVMLENYSNL
                     LSVEVWKADGQVERDPRDLQRQVGSLTTIKNQPPTEERGSRFGKTLTLNTDFVSLRQV
                     PYKYDLYEKTLKYNSDLLSSRNCVRKKGDGCGGFGEPLLYLKQEKPHAGLEYSEYNGN
                     GRALSHKDAIFKHRKIKSLVQPFVCNYCDKTFSFKSLLVSHKRIHTGEKPYECDVCQK
                     TFSHKANLIKHQRIHTGEKPFECPECGKAFTHQSNLIVHQRAHMEKKPYGCSECGKTF
                     AQKFELTTHQRIHTGERPYECNECAKTFFKKSNLIIHQKIHTGEKRYECSECGKSFIQ
                     NSQLIIHRRTHTGEKPYECTECGKTFSQRSTLRLHLRIHTGEKPYECAECGKAFSRKS
                     RLSVHQRVHMA"
     exon            227..353
                     /gene="Zfp1"
                     /gene_synonym="Fnp-1; mkr-1; Zfp-1"
                     /inference="alignment:Splign:2.1.0"
     exon            354..1871
                     /gene="Zfp1"
                     /gene_synonym="Fnp-1; mkr-1; Zfp-1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1742..1747
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp1"
                     /gene_synonym="Fnp-1; mkr-1; Zfp-1"
                     /note="hexamer: AATAAT"
     polyA_site      1759
                     /gene="Zfp1"
                     /gene_synonym="Fnp-1; mkr-1; Zfp-1"
ORIGIN      
        1 tcacagctcc gaggactctg ggaacggccg ctcgctccac aaggtgcacg cttgcgcaaa
       61 agcgctagcg ctcgcccttc ccccacctgc agtcgcgagt gggtgacaag agcccccttc
      121 tccgcgagcc tcgtgacccg gaaccgcgag tggaggctag acccctccag ctgtgccttt
      181 gtgcttctgt gccttcaccc caacccagaa aatgatgggg tcccagggat ccgtttcatt
      241 cactgatgta actgtggact tcacccagga ggagtgggag caactggacc cctcgcagag
      301 gattctgtac atggatgtaa tgctggagaa ctacagcaac ttactttcag tggaagtgtg
      361 gaaggctgat ggccaggtgg agagggaccc cagagacctg cagaggcagg tggggtcact
      421 tacaaccatc aagaaccaac caccaactga agaaagaggc agtcgttttg gaaagacatt
      481 aactctgaac acagactttg tttcattaag acaagttccc tataaatatg atttatatga
      541 aaaaactttg aagtacaatt cagacttact tagcagtaga aactgtgtaa gaaagaaagg
      601 agacgggtgt ggtggatttg gggaaccact tctgtacctg aagcaagaga aaccccacgc
      661 tggactggaa tactcagaat ataatggaaa cggaagggct ctcagccata aggatgccat
      721 ctttaaacat cggaaaatta agagcttggt tcagcctttt gtctgtaact actgtgacaa
      781 gaccttctcc ttcaagtcgc tgctcgttag ccacaagcgg atccacacgg gcgagaagcc
      841 ctatgagtgt gatgtgtgcc agaaaacctt ctcccataag gccaacctca tcaaacatca
      901 gagaattcac accggagaga agccctttga atgtcccgag tgtgggaagg cctttaccca
      961 ccagtcaaac ctcatcgttc accagagagc gcacatggag aagaagccat atggatgcag
     1021 cgagtgtggg aagacattcg ctcagaagtt tgaactcacc acacaccaga ggattcacac
     1081 aggagagcgg ccctacgagt gtaacgaatg cgcaaaaacc ttctttaaga aatcaaacct
     1141 catcatacat cagaagattc acacggggga gaaacgctac gagtgcagcg agtgcgggaa
     1201 gtccttcatc cagaactcgc agctcatcat ccacaggagg actcacactg gggagaagcc
     1261 ctacgagtgc accgagtgtg gcaagacctt cagccagagg tcaacgctga ggctgcacct
     1321 gagaatccac acgggagaga aaccctacga gtgtgcggag tgtgggaaag ccttcagcag
     1381 gaagtctcgc ctcagcgtcc accagagggt tcacatggca tagtcctgag gctcaggcag
     1441 gctgctgcag aaaacctgtc aggccagaat tcttcagtga agggggaagc cctcatgaag
     1501 atgctgaagg aacttgggaa attctattga gatgtaatca atctcaaaaa attaaaaaaa
     1561 aaaaaaggat acctaagaat attatactga gggctggaga gatggctcgg cggttaagag
     1621 cacttccgga ggtcctgagt tcagttccca gcaaccacat ggtggctcac aaccatctgt
     1681 aatgggatcc tatgccacct tctggtgtct gaagagagag acagtgtact catataaaat
     1741 aaataatttt ttaaaaaaag attatactga aagttataat atccagctaa agagtacata
     1801 tccaaatata tgtatgtatc tcagtatgtg tatatccaga tcaattgtaa atagacatac
     1861 ccagctctgt taaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//
