LOCUS       NM_199309               1310 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus zinc finger, DHHC domain containing 19 (Zdhhc19),
            mRNA.
ACCESSION   NM_199309 XM_159706
VERSION     NM_199309.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1310)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1310)
  AUTHORS   Wu,Y., Zhang,X., Zhang,X., Liu,S., Zhang,J., Sun,S., Zhao,S.,
            Wang,Z., Cui,Y., Huang,X. and Liu,M.
  TITLE     ZDHHC19 localizes to the cell membrane of spermatids and is
            involved in spermatogenesisdagger
  JOURNAL   Biol Reprod 106 (3), 477-486 (2022)
   PUBMED   34897408
  REMARK    GeneRIF: ZDHHC19 localizes to the cell membrane of spermatids and
            is involved in spermatogenesisdagger.
REFERENCE   3  (bases 1 to 1310)
  AUTHORS   Wang,S., Qiao,H., Wang,P., Wang,Y. and Qin,D.
  TITLE     ZDHHC19 Is Dispensable for Spermatogenesis, but Is Essential for
            Sperm Functions in Mice
  JOURNAL   Int J Mol Sci 22 (16), 8894 (2021)
   PUBMED   34445597
  REMARK    GeneRIF: ZDHHC19 Is Dispensable for Spermatogenesis, but Is
            Essential for Sperm Functions in Mice.
            Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC140186.3.
            
            On Nov 17, 2006 this sequence version replaced NM_199309.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC049761.1, AK133398.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849381, SAMN00849384
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-43                AC140186.3         27129-27171
            44-287              AC140186.3         27837-28080
            288-409             AC140186.3         28423-28544
            410-549             AC140186.3         29160-29299
            550-722             AC140186.3         29823-29995
            723-828             AC140186.3         30469-30574
            829-914             AC140186.3         36795-36880
            915-1141            AC140186.3         37199-37425
            1142-1310           AC140186.3         37894-38062
FEATURES             Location/Qualifiers
     source          1..1310
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 22.76 cM"
     gene            1..1310
                     /gene="Zdhhc19"
                     /gene_synonym="Gm1744; Gm616"
                     /note="zinc finger, DHHC domain containing 19"
                     /db_xref="GeneID:245308"
                     /db_xref="MGI:MGI:2682948"
     exon            1..43
                     /gene="Zdhhc19"
                     /gene_synonym="Gm1744; Gm616"
                     /inference="alignment:Splign:2.1.0"
     exon            44..287
                     /gene="Zdhhc19"
                     /gene_synonym="Gm1744; Gm616"
                     /inference="alignment:Splign:2.1.0"
     CDS             142..1185
                     /gene="Zdhhc19"
                     /gene_synonym="Gm1744; Gm616"
                     /EC_number="2.3.1.225"
                     /note="probable palmitoyltransferase ZDHHC19; DHHC-19;
                     zinc finger DHHC domain-containing protein 19"
                     /codon_start=1
                     /product="palmitoyltransferase ZDHHC19"
                     /protein_id="NP_955013.1"
                     /db_xref="CCDS:CCDS28122.1"
                     /db_xref="GeneID:245308"
                     /db_xref="MGI:MGI:2682948"
                     /translation="MPFLKDAVTLVKEPQQLPSIPLSWFPSSVFAAFNVTLLLFLSGL
                     FFGFPCRWLVQNGEWAFPAITGPLFILTFFSLVSLNFSDPGILHRGSTKEDPMTVHVV
                     RVNQRAFRLEWCPKCLFHRPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFRLFMLL
                     VLSLCLYSGALLVTCLTFLFRTRHLPFSLDKGMAILVAVPAAGFLIPLFLLLLIQALS
                     VSRAESSYESKCRYHPEYNPFDQGFAKNWYLAMFAPLGPNYMSEVVCLQRPVGTAWIQ
                     EKTKPSPPRRPKHCRPGPPGPQHQPRRVPGKGPPGSGEAAALQEMRRLPASVEKSPGG
                     PRQPTAEPAAGDP"
     exon            288..409
                     /gene="Zdhhc19"
                     /gene_synonym="Gm1744; Gm616"
                     /inference="alignment:Splign:2.1.0"
     exon            410..549
                     /gene="Zdhhc19"
                     /gene_synonym="Gm1744; Gm616"
                     /inference="alignment:Splign:2.1.0"
     exon            550..722
                     /gene="Zdhhc19"
                     /gene_synonym="Gm1744; Gm616"
                     /inference="alignment:Splign:2.1.0"
     exon            723..828
                     /gene="Zdhhc19"
                     /gene_synonym="Gm1744; Gm616"
                     /inference="alignment:Splign:2.1.0"
     exon            829..914
                     /gene="Zdhhc19"
                     /gene_synonym="Gm1744; Gm616"
                     /inference="alignment:Splign:2.1.0"
     exon            915..1141
                     /gene="Zdhhc19"
                     /gene_synonym="Gm1744; Gm616"
                     /inference="alignment:Splign:2.1.0"
     exon            1142..1310
                     /gene="Zdhhc19"
                     /gene_synonym="Gm1744; Gm616"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1285..1290
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zdhhc19"
                     /gene_synonym="Gm1744; Gm616"
                     /note="hexamer: ATTAAA"
     polyA_site      1310
                     /gene="Zdhhc19"
                     /gene_synonym="Gm1744; Gm616"
                     /note="major polyA site"
ORIGIN      
        1 attaagggaa agaccagcta gtatgaagtc ttataattta cctatacacc ctgcttgtac
       61 tgggacctga ggattgaatt ccgatccatg tacctgcaca gcaagccctt tgcccactga
      121 gctgtgtact ctgccctggc catgcctttc ttaaaggatg ctgtgacact tgtgaaggaa
      181 ccacaacagc tgccctccat ccctctttca tggttcccct cgagcgtgtt tgctgccttc
      241 aatgtaacgc tgctgctgtt tttgagtggc cttttcttcg gattcccttg taggtggctg
      301 gttcagaacg gggagtgggc ctttcctgcc atcacaggac cactcttcat cctcaccttc
      361 ttcagtctcg tctcgctcaa cttctcagac cctggtatct tacatcgagg ctccaccaaa
      421 gaggacccca tgacggtgca tgttgttcga gtgaaccaaa gggctttccg cctggaatgg
      481 tgccccaagt gcctcttcca tcgcccaccc cgaacctacc actgcccgtg gtgcaacatt
      541 tgcgtggagg acttcgacca ccattgcaag tgggtcaata actgcatcgg tcaccgcaac
      601 ttccgcctct tcatgctgct ggtcctgtca ctctgtctct actcgggagc cctgctggtc
      661 acctgcctga cattcctatt tcgcacaagg catctgccct tctccctgga caaggggatg
      721 gccatcctgg tggctgtgcc cgctgcgggc tttttgattc cgctcttcct gctgctgctg
      781 atccaggccc tatctgtgag cagggcggag agctcctacg agagcaagtg caggtaccat
      841 ccggaataca acccttttga ccagggcttt gccaagaact ggtatctggc aatgtttgca
      901 ccactgggtc ccaattacat gtctgaagtt gtctgtctgc aaagaccagt ggggacagca
      961 tggatccaag agaagacaaa gccctcacca ccacgtcgtc ctaaacactg taggccaggt
     1021 cctccggggc cccagcacca acctcggcgc gttccaggga aggggccccc agggagtgga
     1081 gaggctgcag ctctccaaga gatgcgaagg ctgcctgcat ctgtggaaaa gtccccagga
     1141 ggtccacgcc aacccacggc tgaacctgcc gctggagacc cctagatgag actctcccca
     1201 gtgcacacag agccaggacc acctgaactt ccttccgcct ctgagtctga atccttgtgg
     1261 tccacttggg acctacccat cctcattaaa tattaattgt tgatttctga
//
