LOCUS       NM_001101433            4587 bp    mRNA    linear   ROD 24-DEC-2024
DEFINITION  Mus musculus zinc finger, CCHC domain containing 24 (Zcchc24),
            mRNA.
ACCESSION   NM_001101433 XM_908180 XM_975187
VERSION     NM_001101433.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4587)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4587)
  AUTHORS   Kang,P., Lee,H.K., Glasgow,S.M., Finley,M., Donti,T., Gaber,Z.B.,
            Graham,B.H., Foster,A.E., Novitch,B.G., Gronostajski,R.M. and
            Deneen,B.
  TITLE     Sox9 and NFIA coordinate a transcriptional regulatory cascade
            during the initiation of gliogenesis
  JOURNAL   Neuron 74 (1), 79-94 (2012)
   PUBMED   22500632
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC164303.2 and AC154759.2.
            
            On Jun 20, 2019 this sequence version replaced NM_001101433.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR11927938.2228430.1,
                                           SRR11927932.1650654.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-462               AC164303.2         105203-105664
            463-663             AC164303.2         117064-117264
            664-828             AC164303.2         154484-154648
            829-4587            AC154759.2         141585-145343       c
FEATURES             Location/Qualifiers
     source          1..4587
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="14"
                     /map="14 15.06 cM"
     gene            1..4587
                     /gene="Zcchc24"
                     /gene_synonym="2310047A01Rik"
                     /note="zinc finger, CCHC domain containing 24"
                     /db_xref="GeneID:71918"
                     /db_xref="MGI:MGI:1919168"
     exon            1..462
                     /gene="Zcchc24"
                     /gene_synonym="2310047A01Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             217..942
                     /gene="Zcchc24"
                     /gene_synonym="2310047A01Rik"
                     /codon_start=1
                     /product="zinc finger CCHC domain-containing protein 24"
                     /protein_id="NP_001094903.1"
                     /db_xref="CCDS:CCDS49419.1"
                     /db_xref="GeneID:71918"
                     /db_xref="MGI:MGI:1919168"
                     /translation="MSLLSAIDTSAASVYQPAQLLNWVYLSLQDTHQASAFDAFRPEP
                     PAGAAPPELAFGKGRPEQLGSPLHSSYLNSVFQLQRGEALSSSVYRNASPYGSLNNIA
                     DGLSSLTEHFSDLTLTSEARKPSKRPPPNYLCHLCFNKGHYIKDCPQARPKGEGLTPY
                     QGKKRCFGEYKCPKCKRKWMSGNSWANMGQECIKCHINVYPHKQRPLEKPDGLDVSDQ
                     SKEHPQHLCEKCKVLGYYCRRVQ"
     exon            463..663
                     /gene="Zcchc24"
                     /gene_synonym="2310047A01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            664..828
                     /gene="Zcchc24"
                     /gene_synonym="2310047A01Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            829..4587
                     /gene="Zcchc24"
                     /gene_synonym="2310047A01Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4567..4572
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zcchc24"
                     /gene_synonym="2310047A01Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      4587
                     /gene="Zcchc24"
                     /gene_synonym="2310047A01Rik"
                     /note="major polyA site"
ORIGIN      
        1 ctctttcctc cgcccgtgcg cgcccactgc tgcagttcgg ggaggcggcg gcggcggcgg
       61 gcggctgcgg gcaacgcgcg gggcgcggga cgcggggcgg atagccgtcg gggccggggc
      121 ggctggcagt gggcacaggc tccccggtgc ccgcccctcc gccgggaggg gggcgcgagc
      181 gggcggccgg ggaggggccg gcaccgccac ggcaaaatga gcctgctgtc tgccatcgac
      241 acgagcgccg cctcggtgta ccagccagcc cagctactca actgggtcta cctgtcgctt
      301 caggacacac accaggctag tgccttcgat gccttccggc ccgagcctcc cgccggcgcc
      361 gcgcccccgg agctggcctt cggcaagggc cgcccggagc agctgggttc tcccctgcac
      421 tccagttatc ttaacagcgt cttccagctg cagcgcggag aggcgctgag cagcagcgtg
      481 tataggaacg cttcgcccta cggttccctc aataacatcg ctgatggcct cagctccctc
      541 accgagcatt tctcagacct gacgctcacc tccgaggccc gcaagcccag caagcggcct
      601 cctccgaact acctgtgcca cctgtgtttc aacaaaggac actacattaa ggactgccct
      661 caggcacgcc ccaaaggtga gggtctgacg ccgtaccaag gcaagaagcg ctgctttggc
      721 gagtacaagt gccccaaatg caagagaaaa tggatgagtg ggaactcttg ggccaacatg
      781 gggcaggagt gcatcaagtg ccacatcaac gtgtacccgc acaagcagag acccctggag
      841 aagcctgacg gcctggatgt gtctgaccag agcaaggagc accctcagca cctctgcgaa
      901 aagtgcaagg tcctgggcta ctactgtcgc cgtgtgcagt gatcttggcc accactgtag
      961 cacccctcag ctgccacctc cctgtgttgc ccaaagggct gaatgtccgc atgcttgagg
     1021 agatgtcacg ggcctgtggg tttaagcaga ggaggcgtgt gtccttgtct cacatgctgg
     1081 cagagtagct gacatgctcc caacagggtg cagagacagg aggctcaggg tctcttcacc
     1141 ataggcctgg gctctgtaga aggacagagg ccagcagagg tctcgatgtt cttgaaagct
     1201 ctcatcctga gtgtctttgg aggctgagcg accctgcatc tgccacaagt acactaaatg
     1261 aactgtgaat cctgaggcct gagggaagtt ctccctccaa gaccaaccag gccctgtccc
     1321 acccagcacc ttgcagcttg cctcgtatga aaaaccactc tagaaagtcc caagtcattc
     1381 ctgatctgta gccacagtgg acagtcactt cttctagcag ctactgagga gtggccctct
     1441 gtccctgccc acactgagtc cttaatctca ccagccctga catcactgca ctgtacctgg
     1501 tagctaaaca cagcctccct ctgccaatga gacaggcaag agggtgaggc aatggagaca
     1561 tcgaacagta accagtgtgc caagacatcc tagggacatg aggcatcacc acttcccatg
     1621 acctccccca gactgtcctg taggcttggg ttctgtcacc tgctctctct cttgaccctt
     1681 agcctcccac ccatgaccgg gatgccaccc cacaaaagcc gtaagactgt tctggcatga
     1741 aggagggggg ccttggcagt ctggagccgc tttctgccac ttggggcaag gacatctcat
     1801 ccccagcctt agtctcccca ttagttaaat gacaaagtgg caccagaaaa caagaggtcc
     1861 cagtgacctc tgaacttcta gaagagagct ggctgcctct ggaacagagt gtcactaggg
     1921 gtcgggggtg gggggagatt tgtctctaaa catctaggtg ccccgccctc cagcctctgt
     1981 cctgatagcc acttaagatg tcctctccta tagccctcct tacctgattg atgtccccat
     2041 cccctgagaa gacgaaagag gacccctcct cctctttctc ctcagccccc caacactggg
     2101 caagcctaaa atgagccaca gaacctctcc tttggaaact gaggatagag atttcctact
     2161 tcctaaggag gcagagagat tacctggcat gtcacatggt cgcagggtgg ctgttgtcct
     2221 ggccagggtc agcagtgtgc cccctaccct gtgacaagcc acacctctct ggtctttctc
     2281 ctcttcacca gctgccagga ctgactttct tgactcatac tatgcttcta tggagagaga
     2341 gagggaaaaa aaatcagacc atgaaatcgg cctgaaattc agtgtttaca tatggtgccc
     2401 agttgccttt tgttttcaaa tgaaaatgtt ttgtatgact gacgtgaagt gttaagcaag
     2461 ggtccagggg gtaagtggaa gagatggttg tatgtctgca gcagctagct gcagggtaga
     2521 ttttgggaga acatactctc tgagcactta acaaaggtat tatctgtggc agcccagact
     2581 attagctgcc accgtgctgc cctcgagtgg tagcatgctg ggctgcagac ggtgagcatc
     2641 cagcaccaag gactctccag tcttgctgct gcactaaggc tgccccatgc caagcttcct
     2701 gttgctagga aagggatttt tttctttttg gcatcccact gggactctaa agagggtgtc
     2761 atggcaataa acagtgcacc tgtgtcccaa atgaggacaa attggaaata ggtaatttgg
     2821 gtcaaaaatg caaagagcta gcgacagttt tcagaaagcc agggccagta gaaggtgagc
     2881 tatcagccta aaaggaccgt ttcggtcact agactgatgt ctgtgtacag ccaggccccc
     2941 cgatcacccg tcctgctgaa cgtgtgatct tcctgaagct agcaaaagat gccactgtca
     3001 aggctgggtg ccgggagagt caatgttcag agggcctacg agcccagggg acaggaaagc
     3061 gtgtggttgt aatacactca aaagggacaa tcgcttgcag tcggtagatc tagtgatcta
     3121 gttgagagag aatggtgttt accccatatg aagtattcaa tagctcttct tgttaatttc
     3181 tatttatttt gagttatact tgacacagaa ttctttcttt tttttaaaaa aatgctatgt
     3241 gtgtattttg ggaaaaaatt catagatgtt aaaatttctg catggttacc agtttttctt
     3301 tggacatgga acttggtagc cttcccccag cccccaaatt cttcataatg atttttgttt
     3361 gtatatattt gagggtcttt tttttaaaaa gaaaagaaaa gaaaaatatg atggcttgat
     3421 actattaaaa tggaaaacaa cagaaaggca tgcgtttaaa tgtcagtgct tttgaaagcg
     3481 caatccatat caaactgatt tttagatgta ttttgcaagt ctggttgagc tataagaaga
     3541 tatttatggt gagaactttt cctttttttc ttgttatttt ttctatgctt tggtctgtaa
     3601 aaagtatgca agtgaactag attaaggagg aaatattatc tacatagaat tattatatga
     3661 cgctggtaca taattctaac gaggaaaaaa atctttgcaa tcttttaagc tatggttttt
     3721 ttttattaat tttgttttcc ttggatgaaa atatcagtat taagcagcca gtatattatt
     3781 caagtgttta gacttattaa tatgctcttg tcctgtattt atacatttgt gtattttgga
     3841 agtattgcct ttttaaggga agttatcagt gggcaacacg gtaaaaaggg aacagcgatc
     3901 ctttgtgcct cttccaatga agatgacagg tggcatggaa tctttccccc tgcatctttg
     3961 tgtcattgcc ttgtttctac agttttatta ctttttagga gaagggtggg gaactgacaa
     4021 acgaagagga ctcatcgaac aaacagaccc tttggtctgt gagcccagtg gccttgtcag
     4081 caggacccaa ggaggtacaa ggaccccgga ggaggttcca ggcctgcctg gaagccccat
     4141 gctctttgat cttggatctg tccactaagc cctcacacct gccccctagc tctaatggac
     4201 ttgaatttac tttaaagtct aatccaacct cactacagtg tagccagtgc aaaaactaat
     4261 actgaaatga ggggtgtttg cagccctctg ggaagtggaa atgaggctta tcccctgctt
     4321 catggccaac ttccctgtac caactcctgc agccctgtgt ggtgaccctg tctgtgtctg
     4381 tatctgtcta tgtgtgtgca ctcagctaaa aagacaaaca gagcccgtga gccccgcctt
     4441 gagggtacat ggagaaagtt cctcccctcc ccgaaaggga cggcctcggg gtggcattcc
     4501 gttgtgtgcc ttattcctgg agactatata aagcttgcct atgaaaatat agcctttctg
     4561 tgctgtatta aaaggacttt ggaaaga
//
