LOCUS       NM_001005916            2804 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Mus musculus zinc finger and BTB domain containing 9 (Zbtb9), mRNA.
ACCESSION   NM_001005916
VERSION     NM_001005916.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2804)
  AUTHORS   Yokoyama,S., Ito,Y., Ueno-Kudoh,H., Shimizu,H., Uchibe,K.,
            Albini,S., Mitsuoka,K., Miyaki,S., Kiso,M., Nagai,A., Hikata,T.,
            Osada,T., Fukuda,N., Yamashita,S., Harada,D., Mezzano,V., Kasai,M.,
            Puri,P.L., Hayashizaki,Y., Okado,H., Hashimoto,M. and Asahara,H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC049933.1.
            
            On Oct 24, 2004 this sequence version replaced NM_001005916.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC049933.1, SRR1660815.229507.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2804
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="FVB/N"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17"
     gene            1..2804
                     /gene="Zbtb9"
                     /gene_synonym="3930402F13Rik"
                     /note="zinc finger and BTB domain containing 9"
                     /db_xref="GeneID:474156"
                     /db_xref="MGI:MGI:1918022"
     exon            1..136
                     /gene="Zbtb9"
                     /gene_synonym="3930402F13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            137..2784
                     /gene="Zbtb9"
                     /gene_synonym="3930402F13Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             204..1583
                     /gene="Zbtb9"
                     /gene_synonym="3930402F13Rik"
                     /codon_start=1
                     /product="zinc finger and BTB domain-containing protein 9"
                     /protein_id="NP_001005916.1"
                     /db_xref="CCDS:CCDS37520.1"
                     /db_xref="GeneID:474156"
                     /db_xref="MGI:MGI:1918022"
                     /translation="MDASTPLPPASSSPRCNPAPQTIHIEFPHHSSSLLESLNRHRLE
                     GKFCDVSLLVQGRELRAHKAVLAAASPYFHDKLLLGDAPRLTLPNVIEADAFEGLLQL
                     IYSGSLHLPLDALPAHLLVASGLQMWQVVDRCSEILRELETSGGISAGGRASSLTLIS
                     TTSSGGWCIRSSPFQNPVRSSASTENSVLPESPAGGEGSELEGMLQIQVKVEEEEEQG
                     SAAPLFQTPQPERVSGGVSQACGSHPLPTPALPSKPSEDESSTVDPPAPPVQASQILY
                     VNQENVECKEEIARGTKEKTKVLSGEDSEEKEELRYLLSSGGGESSGAGDPSWKPVDL
                     HGNEILSGDGGPGGTGQAMHGPVKLGGTPPADGKCFACLCGKRFAVKPKRDRHIMLTF
                     SLRPFGCGICNKRFKLKHHLTEHMKTHARALHACPHCGRRFRVQAFFLRHRDLCKGQG
                     WPTYHWTYK"
     regulatory      2756..2761
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zbtb9"
                     /gene_synonym="3930402F13Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2780
                     /gene="Zbtb9"
                     /gene_synonym="3930402F13Rik"
                     /note="major polyA site"
ORIGIN      
        1 ggcggaactg cggtagcttc cggccggcca ggcgcactgg cggttgaggt gctccgacgc
       61 ggtcgcgcgt gcggtggggg cgtgtcggtg ggacgtcgcg gggccggagc tcactgagcc
      121 ggccggagcg agcacgcctt caccccgtat agaaccctgc actgcccgac tccccgggat
      181 ttatttctct tcccgaggta gccatggatg cttcgactcc tttgcctccc gcatcctcat
      241 ctccgagatg caacccagcc ccacagacaa tccacattga gttccctcat catagctctt
      301 cgctgctgga atccctgaac cgccacaggc tggagggaaa gttctgtgat gtgtccctcc
      361 tggttcaggg cagggaactt agggctcaca aagcagtgtt ggctgctgcc tctccttact
      421 tccatgacaa gctgcttttg ggggatgcgc cccgactgac tttaccgaat gtcatcgagg
      481 ccgatgcgtt cgagggactg cttcagctca tttattcagg aagcctccac ctgccgctgg
      541 atgccctccc tgcccatctc cttgtagcca gcggccttca gatgtggcaa gtggtagatc
      601 ggtgctcaga gattcttcga gaactagaaa cgtctggtgg gatttcagcc ggtggaagag
      661 cctccagcct cacacttatt tccacaacat cttcaggagg ctggtgcatt cgctcttccc
      721 ctttccagaa cccagtacgc tcctctgctt ctacagagaa ttctgttctc cctgagagcc
      781 ccgctggagg ggaggggagt gaactagaag gaatgttaca gattcaggtg aaagtagagg
      841 aggaagagga gcaggggtca gcagctccac tctttcagac tcctcagccg gagagagtgt
      901 cgggaggggt ttcccaagct tgtggatccc acccattgcc tacacctgct cttcccagca
      961 agccttcaga ggatgagagc tcaacagtag atcctcctgc ccctcctgta caagcttccc
     1021 aaatcttata tgtgaatcag gaaaacgttg agtgtaagga ggagatagca agaggcacaa
     1081 aggaaaagac caaagtacta tctggagagg actctgagga gaaggaggag ctgagatact
     1141 tgctgtcctc aggaggaggg gaatcgtctg gggcaggaga tccatcgtgg aaaccagtgg
     1201 atcttcatgg gaatgaaatc ctgtcagggg atggaggacc tggaggaaca gggcaggcta
     1261 tgcatgggcc tgtgaagcta ggagggacac cccctgcaga tgggaagtgc tttgcttgct
     1321 tgtgtggaaa acggtttgca gtaaagccga aacgagaccg acacatcatg ttgacgttca
     1381 gccttcgccc ttttggatgt ggcatctgta ataaacgttt caagttgaag catcatctaa
     1441 cagagcacat gaagacccat gcgagagctc tgcatgcgtg tccccattgt ggccgtcgat
     1501 tccgtgtcca ggccttcttc cttcgccacc gggacttatg caagggccag ggctggccca
     1561 cttaccactg gacttacaaa tgactactgg tgctctctag tgatttctag gacaagatag
     1621 cccctgctgc tgctggactc ttaccttcac cacctcagtc ctggattgta taatcattcc
     1681 aagagattat atatattgtc atgaacccct tactcttggg tatgggtctc accctggtag
     1741 tccaggttta gacagacttt agaaaatcat gcttctggtc acttaaccta aatggccctt
     1801 tttgtattga tagccagtga aggaactgct gagctcagat taatgagaga ggagttgggg
     1861 catagtcacc cagtaactct taacttcatc ttcatggggg ggagagggag ctggtctcca
     1921 actaggaatg catttgattc agagctcaag taattgccag actaaggtct gagcggcttc
     1981 tccctccctg ttagcagtat tctgtttctg tactttctgt cattttccag atgcttttta
     2041 ggttctcacc agtatacacc tttcccaaat atccttttaa aaatacttga gtggggctgg
     2101 agagatggct cagttattaa aagcactctg ctcttctaga agtcctgagt tcaattccca
     2161 gcaaccacat ggtggctcac aaccatctaa aatggatctg atgccctctt ctggcatgca
     2221 ggcatacatg cagacagagc attcatacat ttaagaaaaa tgtatttgaa catgcaacaa
     2281 gtgtggtgca cacatttaat tacaacacag aggaggcaga ggcaggtgga tctcttctaa
     2341 gttcaaggcc agccagggct acacatggtg agaccctatc tttaggggta aaaatagtac
     2401 ttgagcactt tagcaaactg agcatttcat attctattct gaaagtccat agtagagtgt
     2461 attccctcag cagccttcac cttgtccgcc tttcactacc actgataact tgcttatgat
     2521 cacaatgaca gatatgaccc acgaactcag gagatggcag gtgacctaca aagctctcag
     2581 ggtggcattt gctctctgag cagatcgccc tgcttagagg aactcagggt tgaaaccaca
     2641 cgtggtgaag tctgcagagg agctacaatg ggaccgtact gctttcttca cccacacttg
     2701 gtagaggtag aggggtagat agtagaatgg aggtgaaggg aaatttaagg ttgttaataa
     2761 actctgccct gaaatctaaa ctgaaaaaaa aaaaaaaaaa aaaa
//
