LOCUS       NM_025970               3560 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Mus musculus zinc finger and BTB domain containing 8 opposite
            strand (Zbtb8os), mRNA.
ACCESSION   NM_025970 NM_027131
VERSION     NM_025970.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3560)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   2  (bases 1 to 3560)
  AUTHORS   Bar,I., Lambert De Rouvroit,C., Royaux,I., Krizman,D.B.,
            Dernoncourt,C., Ruelle,D., Beckers,M.C. and Goffinet,A.M.
  TITLE     A YAC contig containing the reeler locus with preliminary
            characterization of candidate gene fragments
  JOURNAL   Genomics 26 (3), 543-549 (1995)
   PUBMED   7607678
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL607123.22.
            
            On Feb 13, 2019 this sequence version replaced NM_025970.3.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC046825.1, AK132279.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            RefSeq Select criteria           :: based on conservation,
                                                expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-172               AL607123.22        84953-85124
            173-197             AL607123.22        89713-89737
            198-319             AL607123.22        90462-90583
            320-402             AL607123.22        90726-90808
            403-455             AL607123.22        92106-92158
            456-492             AL607123.22        93197-93233
            493-3560            AL607123.22        95789-98856
FEATURES             Location/Qualifiers
     source          1..3560
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 63.26 cM"
     gene            1..3560
                     /gene="Zbtb8os"
                     /gene_synonym="2010001H09Rik; 2310028N13Rik; Arch; Archm"
                     /note="zinc finger and BTB domain containing 8 opposite
                     strand"
                     /db_xref="GeneID:67106"
                     /db_xref="MGI:MGI:1914356"
     exon            1..172
                     /gene="Zbtb8os"
                     /gene_synonym="2010001H09Rik; 2310028N13Rik; Arch; Archm"
                     /inference="alignment:Splign:2.1.0"
     CDS             76..579
                     /gene="Zbtb8os"
                     /gene_synonym="2010001H09Rik; 2310028N13Rik; Arch; Archm"
                     /note="archease (Arch)"
                     /codon_start=1
                     /product="protein archease"
                     /protein_id="NP_080246.1"
                     /db_xref="CCDS:CCDS18689.1"
                     /db_xref="GeneID:67106"
                     /db_xref="MGI:MGI:1914356"
                     /translation="MAQEEEDVRDYNLTEEQKATKDKYPPVNRKYEYLDHTADVQLHA
                     WGDTLEEAFEQCAMAMFGYMTDTGTVEPLRTVEVETQGDDLQSLLFHFLDEWLYKFSA
                     DEYFIPREVKVLNIDQKNFKLRSIGWGEEFSLSKHPQGTEVKAITYSAMQVYNEEKPE
                     VFVIIDI"
     exon            173..197
                     /gene="Zbtb8os"
                     /gene_synonym="2010001H09Rik; 2310028N13Rik; Arch; Archm"
                     /inference="alignment:Splign:2.1.0"
     exon            198..319
                     /gene="Zbtb8os"
                     /gene_synonym="2010001H09Rik; 2310028N13Rik; Arch; Archm"
                     /inference="alignment:Splign:2.1.0"
     exon            320..402
                     /gene="Zbtb8os"
                     /gene_synonym="2010001H09Rik; 2310028N13Rik; Arch; Archm"
                     /inference="alignment:Splign:2.1.0"
     exon            403..455
                     /gene="Zbtb8os"
                     /gene_synonym="2010001H09Rik; 2310028N13Rik; Arch; Archm"
                     /inference="alignment:Splign:2.1.0"
     exon            456..492
                     /gene="Zbtb8os"
                     /gene_synonym="2010001H09Rik; 2310028N13Rik; Arch; Archm"
                     /inference="alignment:Splign:2.1.0"
     exon            493..3560
                     /gene="Zbtb8os"
                     /gene_synonym="2010001H09Rik; 2310028N13Rik; Arch; Archm"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      722
                     /gene="Zbtb8os"
                     /gene_synonym="2010001H09Rik; 2310028N13Rik; Arch; Archm"
                     /note="major polyA site"
     regulatory      749..754
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zbtb8os"
                     /gene_synonym="2010001H09Rik; 2310028N13Rik; Arch; Archm"
                     /note="hexamer: AATGAA"
     polyA_site      772
                     /gene="Zbtb8os"
                     /gene_synonym="2010001H09Rik; 2310028N13Rik; Arch; Archm"
     regulatory      2290..2295
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zbtb8os"
                     /gene_synonym="2010001H09Rik; 2310028N13Rik; Arch; Archm"
                     /note="hexamer: ATTAAA"
     polyA_site      2311
                     /gene="Zbtb8os"
                     /gene_synonym="2010001H09Rik; 2310028N13Rik; Arch; Archm"
     regulatory      2417..2422
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zbtb8os"
                     /gene_synonym="2010001H09Rik; 2310028N13Rik; Arch; Archm"
                     /note="hexamer: ATTAAA"
     polyA_site      2434
                     /gene="Zbtb8os"
                     /gene_synonym="2010001H09Rik; 2310028N13Rik; Arch; Archm"
ORIGIN      
        1 gtagagcgga agttatggcg cggggccgaa gtctggctga tgaagggcgg aagtaagagt
       61 accaactccg caatcatggc tcaagaggag gaagatgtta gagattacaa tttgacggag
      121 gaacagaagg cgaccaagga caagtatcct ccagtcaatc gaaaatatga atatttggat
      181 catacggctg atgtccagtt acacgcatgg ggagacactc tggaggaagc atttgaacag
      241 tgtgccatgg ccatgtttgg ttacatgaca gatactggga ctgtggagcc cctccgcacc
      301 gtggaagtag aaacccaagg ggacgacctg cagtctctgc tgtttcactt tttggacgag
      361 tggctttaca agttcagcgc tgatgagtac ttcatacccc gggaagtgaa agtacttaat
      421 attgatcaga aaaatttcaa gttacgatcc attgggtggg gagaagagtt ctcactgtcc
      481 aagcaccctc agggaacaga agtcaaggca ataacgtact cagcaatgca agtctataat
      541 gaagagaagc cagaagtgtt tgtgatcatc gacatttaaa ataccaaaga gggaaaagac
      601 tcgtgaagag ctgatttgtt ttcttccgtt tgagaggatg tgatgactca ttttctatag
      661 tatctatgct aaatggaaat acggaactgt acatttaaag tgtggctttc agaaatggaa
      721 aaccagtgtg tagcagtggt ctctagataa tgaattcctc ggtttttgag gagcagtctt
      781 gtacttggtc atttgagcag gagcagcagg tgccttacat tgtttgtttg ttttttgagt
      841 tatgccattt ttctttcttt tttttcaatt ttttatttgg tattttcttc atttacattt
      901 caaatgctat cccgaaagtt ccctgtgccc tccccactgc cctgctcccc tacccaccca
      961 ctcccacttc ttggccctgg cgttccccta tactgaggca tataaagttt gcaagaccaa
     1021 ggggcctctc ttcccaatga tggccaacta ggccatcttc ttatacatat gcagctagag
     1081 acacgaactc tgtgggtact ggttagttca tattgttgtt ccacctatag ggttgcagat
     1141 ccctttagct ccttgggtac tttctctagc tcctccattg ggggccctgt ggtccatcca
     1201 atagctgact gtgagcatcc acttctgtgt ttgccaggca ctggcatagc ctcacaagag
     1261 acaactatat caaggtcctt tcagcaaaat cttgctggca tatgcaatag tgtctgtgtt
     1321 tggtggctga ttatgggatg gatccctggg tggggcagcc tctgaatggt ccatcttttc
     1381 atctcagctc caaactttgt ctctgtaact ccttccatgg gtactttgtt ccctgttcta
     1441 aggaggaatg aggtatccac gcattggtct tccttctagt tgccttactt tgttcttccc
     1501 tggaatgcag gtgctccagc gtgtctcaga agggactgcc tgctggtgta agcagcctcc
     1561 agggccgaat ccaacttaat gtcatttgag ctgggtatga tagacatatt atatgcctgt
     1621 gatctcaaca ctcaggatcc tgaattcaag gccagctttg gctatagaat gagttaagag
     1681 ctagcctggg caattgaaca tgtccctgtc tcagaaaaga caggtgtaga gacaagtgtg
     1741 gagcagagaa catgctcacc atgtaggctg aggtcatggt tttacattgc taaggggcag
     1801 agccatcctc tgttccagtt ggttctgagt agaaccctct agaagacttc ttagaagact
     1861 cctgattttc tctcttcttt ttaagcagca atacttaata ttttcttagg atgaatattt
     1921 gacattatat cttacatata gacctttctg acatgtaatt ttattttgtt tatcttttgt
     1981 tttttttttt aattttattt attattatag taagtacact gtagctatct tcagacacac
     2041 cagaagaggg agtcagatct tgttacagat ggttgtaagc caccatgtgg ttgctgggat
     2101 ttgaactctg gaccttcgga agagcagtcg ggtgctctta cccactgagc catctcacca
     2161 gccctctttt ggttttttta agataaagtt tctctgtata acagagccct gactctcctg
     2221 gactcaattt gtagaccagg ctggccttga gctcaaagat ctacctgcct ctgcctcctg
     2281 ggtgctagga ttaaaaacgt gtaccaccac accctcctga aatttcattt ctttactttt
     2341 ttgagacaag gttccactgt gtagaccagg ttggccttga actcaaagta cctgcctcct
     2401 ccttctaagt actgggatta aaggtctgcc ccaacatgct gcggttttat taatccagtc
     2461 tatgcatcca gttagagaac aaccaccacc accaccacca ccaccaccac caccacccaa
     2521 aaaacctgtt tttaacctat ttagggttga agagatggct tagtgattag cagctcttgc
     2581 tgagcaatca gggcgggggt ttgtatccca gcacctatat aagaagctga gtgtctgcat
     2641 accactacct ccagctctga gacaagtgga gatcttgtcc tggcttactc tggtccacgg
     2701 gtgtcttcct ggctgctctc tcatggcaac ctcatggtga atcctcctgg ttcttccagg
     2761 tctctctaca cctttctctt gtctcttcct cccctgcttc ctccctctgt ccctcctttt
     2821 cccacaccct ctcttgactc cctctctcct tggtctcctc ctcttttagt acccccaact
     2881 atgatccaaa accctgccct atttattctc ttctcctgcc cagctctgta ttagccaatc
     2941 agaggtgttg gcaaacagtt tttacataac attaagataa ccgtgccatc atcctgactg
     3001 caaagagggg tctggggctc atagaagtga gcatctgaaa tacacagtgc acacccccat
     3061 ccctaacgcc atctcagccc ttagacggtc ttctgtgaca ctgaaatgac agaatagata
     3121 gatgctccat cgcatcctta ctacagccct tcccctcacg ttgtggttca ttacaacttc
     3181 ataacttgtt actttgctac tgttacgaat tacaagcgaa tatttttgga gatggagatt
     3241 cgccaaagag atcgagatcc acaggttgag aacaactgct ctagcaggta aactggaggg
     3301 agttttgtat agacaacaag aaagccttgt ttgtaaagag gcgatttcaa ctgctggtgg
     3361 cactgtgaca gactgctggt gttcaggcag aaggaactct gtaaaacacc atttggattc
     3421 caggcaagca cctcttcatt cccacaggta tccatcattt tccacagaca gagctcctgt
     3481 cagccatttt ccattcatcc ctagctacaa atgaagttgt aattgtaagc tcactgatta
     3541 aacgaggaac tgaggaaaaa
//
